RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 AGAP1Q9UPQ3 857 aa11.78□□□□□ -0.52
DDR1-240ENST00000454612 PRKCBP05771 671 aa11.78□□□□□ -0.52
DDR1-240ENST00000454612 ADSSP30520 456 aa11.78□□□□□ -0.52
DDR1-240ENST00000454612 SSTR1P30872 391 aa11.78□□□□□ -0.52
DDR1-240ENST00000454612 BACE1P56817 501 aa11.78□□□□□ -0.52
DDR1-240ENST00000454612 TSNAXIP1Q2TAA8 658 aa11.78□□□□□ -0.52
DDR1-240ENST00000454612 APBB1IPQ7Z5R6 666 aaPredicted RBP11.78□□□□□ -0.52
DDR1-240ENST00000454612 FAF2Q96CS3 445 aa11.78□□□□□ -0.52
DDR1-240ENST00000454612 CCDC97Q96F63 343 aaPredicted RBP11.78□□□□□ -0.52
DDR1-240ENST00000454612 SGIP1Q9BQI5 828 aa11.78□□□□□ -0.52
DDR1-240ENST00000454612 FIS1Q9Y3D6 152 aa11.78□□□□□ -0.52
DDR1-240ENST00000454612 UBOX5O94941 541 aa11.78□□□□□ -0.52
DDR1-240ENST00000454612 VTNP04004 478 aa11.78□□□□□ -0.52
DDR1-240ENST00000454612 TXNP10599 105 aaKnown RBP11.78□□□□□ -0.52
DDR1-240ENST00000454612 DPP9Q86TI2 863 aa11.78□□□□□ -0.52
DDR1-240ENST00000454612 ASAP3Q8TDY4 903 aa11.78□□□□□ -0.52
DDR1-240ENST00000454612 CYTH2Q99418 400 aa11.78□□□□□ -0.52
DDR1-240ENST00000454612 RANBP17Q9H2T7 1088 aaKnown RBP11.78□□□□□ -0.52
DDR1-240ENST00000454612 CNOT10Q9H9A5 744 aaKnown RBP11.78□□□□□ -0.52
DDR1-240ENST00000454612 KLK14Q9P0G3 267 aa11.78□□□□□ -0.52
DDR1-240ENST00000454612 MT-ND3P03897 115 aa11.77□□□□□ -0.52
DDR1-240ENST00000454612 TCF4P15884 667 aa11.77□□□□□ -0.52
DDR1-240ENST00000454612 HSPA6P17066 643 aa11.77□□□□□ -0.52
DDR1-240ENST00000454612 CUL2Q13617 745 aa11.77□□□□□ -0.52
DDR1-240ENST00000454612 MUM1Q2TAK8 710 aa11.77□□□□□ -0.52
DDR1-240ENST00000454612 DTX3LQ8TDB6 740 aa11.77□□□□□ -0.52
DDR1-240ENST00000454612 SPOCK2Q92563 424 aa11.77□□□□□ -0.52
DDR1-240ENST00000454612 AGAP3Q96P47 875 aa11.77□□□□□ -0.52
DDR1-240ENST00000454612 TRABDQ9H4I3 376 aa11.77□□□□□ -0.52
DDR1-240ENST00000454612 HOXC10Q9NYD6 342 aa11.77□□□□□ -0.52
DDR1-240ENST00000454612 DDX3YO15523 660 aaKnown RBP11.77□□□□□ -0.53
DDR1-240ENST00000454612 DIAPH2O60879 1101 aa11.77□□□□□ -0.53
DDR1-240ENST00000454612 TJP3O95049 919 aa11.77□□□□□ -0.53
DDR1-240ENST00000454612 CST3P01034 146 aaPredicted RBP11.77□□□□□ -0.53
DDR1-240ENST00000454612 APRTP07741 180 aa11.77□□□□□ -0.53
DDR1-240ENST00000454612 PHKA2P46019 1235 aa11.77□□□□□ -0.53
DDR1-240ENST00000454612 GPC3P51654 580 aa11.77□□□□□ -0.53
DDR1-240ENST00000454612 KIF22Q14807 665 aa11.77□□□□□ -0.53
DDR1-240ENST00000454612 DUOXA2Q1HG44 320 aa11.77□□□□□ -0.53
DDR1-240ENST00000454612 FYB2Q5VWT5 728 aa11.77□□□□□ -0.53
DDR1-240ENST00000454612 FAM160B1Q5W0V3 765 aa11.77□□□□□ -0.53
DDR1-240ENST00000454612 ARHGEF18Q6ZSZ5 1173 aa11.77□□□□□ -0.53
DDR1-240ENST00000454612 MCOLN2Q8IZK6 566 aa11.77□□□□□ -0.53
DDR1-240ENST00000454612 NSMCE1Q8WV22 266 aa11.77□□□□□ -0.53
DDR1-240ENST00000454612 MAIP1Q8WWC4 291 aa11.77□□□□□ -0.53
DDR1-240ENST00000454612 ZNF606Q8WXB4 792 aa11.77□□□□□ -0.53
DDR1-240ENST00000454612 SNX9Q9Y5X1 595 aa11.77□□□□□ -0.53
DDR1-240ENST00000454612 DCAF8L1A6NGE4 600 aa11.77□□□□□ -0.53
DDR1-240ENST00000454612 MCF2LO15068 1137 aa11.77□□□□□ -0.53
DDR1-240ENST00000454612 RIPK2O43353 540 aa11.77□□□□□ -0.53
DDR1-240ENST00000454612 CSPG5O95196 566 aa11.77□□□□□ -0.53
DDR1-240ENST00000454612 LCA5LO95447 670 aa11.77□□□□□ -0.53
DDR1-240ENST00000454612 ITGB3P05106 788 aa11.77□□□□□ -0.53
DDR1-240ENST00000454612 CXCL8P10145 99 aa11.77□□□□□ -0.53
DDR1-240ENST00000454612 POLR2BP30876 1174 aaKnown RBP11.77□□□□□ -0.53
DDR1-240ENST00000454612 C3orf62Q6ZUJ4 267 aa11.77□□□□□ -0.53
DDR1-240ENST00000454612 MIPOL1Q8TD10 442 aa11.77□□□□□ -0.53
DDR1-240ENST00000454612 ERP27Q96DN0 273 aa11.77□□□□□ -0.53
DDR1-240ENST00000454612 SLCO1B3Q9NPD5 702 aa11.77□□□□□ -0.53
DDR1-240ENST00000454612 METTL5Q9NRN9 209 aaKnown RBP11.77□□□□□ -0.53
DDR1-240ENST00000454612 NOP53Q9NZM5 478 aaKnown RBP11.77□□□□□ -0.53
DDR1-240ENST00000454612 NUB1Q9Y5A7 615 aa11.77□□□□□ -0.53
DDR1-240ENST00000454612 GRIN2DO15399 1336 aa11.77□□□□□ -0.53
DDR1-240ENST00000454612 ARHGAP42A6NI28 874 aa11.76□□□□□ -0.53
DDR1-240ENST00000454612 TOM1L1O75674 476 aa11.76□□□□□ -0.53
DDR1-240ENST00000454612 TARSP26639 723 aaKnown RBP11.76□□□□□ -0.53
DDR1-240ENST00000454612 SCTRP47872 440 aa11.76□□□□□ -0.53
DDR1-240ENST00000454612 ITIH3Q06033 890 aa11.76□□□□□ -0.53
DDR1-240ENST00000454612 ALCAMQ13740 583 aa11.76□□□□□ -0.53
DDR1-240ENST00000454612 ACTR5Q9H9F9 607 aaPredicted RBP11.76□□□□□ -0.53
DDR1-240ENST00000454612 NAALADL1Q9UQQ1 740 aa11.76□□□□□ -0.53
DDR1-240ENST00000454612 FNDC3AQ9Y2H6 1198 aaKnown RBP11.76□□□□□ -0.53
DDR1-240ENST00000454612 MYH1P12882 1939 aa11.76□□□□□ -0.53
DDR1-240ENST00000454612 B4GALT5O43286 388 aa11.76□□□□□ -0.53
DDR1-240ENST00000454612 PRPSAP2O60256 369 aa11.76□□□□□ -0.53
DDR1-240ENST00000454612 DDNO94850 711 aaPredicted RBP11.76□□□□□ -0.53
DDR1-240ENST00000454612 UPP2O95045 317 aa11.76□□□□□ -0.53
DDR1-240ENST00000454612 LCP1P13796 627 aa11.76□□□□□ -0.53
DDR1-240ENST00000454612 TDRD10Q5VZ19 366 aaKnown RBP11.76□□□□□ -0.53
DDR1-240ENST00000454612 C11orf63Q6NUN7 778 aa11.76□□□□□ -0.53
DDR1-240ENST00000454612 CENPUQ71F23 418 aa11.76□□□□□ -0.53
DDR1-240ENST00000454612 PDIK1LQ8N165 341 aa11.76□□□□□ -0.53
DDR1-240ENST00000454612 CFAP57Q96MR6 1250 aa11.76□□□□□ -0.53
DDR1-240ENST00000454612 TMEM237Q96Q45 408 aa11.76□□□□□ -0.53
DDR1-240ENST00000454612 MED10Q9BTT4 135 aa11.76□□□□□ -0.53
DDR1-240ENST00000454612 UVRAGQ9P2Y5 699 aa11.76□□□□□ -0.53
DDR1-240ENST00000454612 HESX1Q9UBX0 185 aa11.76□□□□□ -0.53
DDR1-240ENST00000454612 PNMA3Q9UL41 463 aa11.76□□□□□ -0.53
DDR1-240ENST00000454612 PLIN4Q96Q06 1357 aa11.76□□□□□ -0.53
DDR1-240ENST00000454612 IGF2BP3O00425 579 aaKnown RBP eCLIP11.76□□□□□ -0.533e-6■□□□□ 10.4
DDR1-240ENST00000454612 CREB3O43889 395 aa11.76□□□□□ -0.53
DDR1-240ENST00000454612 PCNX4Q63HM2 1172 aa11.76□□□□□ -0.53
DDR1-240ENST00000454612 TRPM8Q7Z2W7 1104 aa11.76□□□□□ -0.53
DDR1-240ENST00000454612 LPAR1Q92633 364 aa11.76□□□□□ -0.53
DDR1-240ENST00000454612 DDX27Q96GQ7 796 aaKnown RBP11.76□□□□□ -0.53
DDR1-240ENST00000454612 CDHR1Q96JP9 859 aa11.76□□□□□ -0.53
DDR1-240ENST00000454612 DHX35Q9H5Z1 703 aaKnown RBP11.76□□□□□ -0.53
DDR1-240ENST00000454612 CISHQ9NSE2 258 aa11.76□□□□□ -0.53
DDR1-240ENST00000454612 QSER1Q2KHR3 1735 aa11.76□□□□□ -0.53
DDR1-240ENST00000454612 PFASO15067 1338 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms