RNA–Protein interactions for RNA: ENST00000452950.1

CSTF1-204, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-204ENST00000452950 ADD2P35612 726 aa7.41□□□□□ -1.22
CSTF1-204ENST00000452950 CARSP49589 748 aaKnown RBP7.41□□□□□ -1.22
CSTF1-204ENST00000452950 GALK1P51570 392 aa7.41□□□□□ -1.22
CSTF1-204ENST00000452950 PER3P56645 1201 aa7.41□□□□□ -1.22
CSTF1-204ENST00000452950 VAMP2P63027 116 aa7.41□□□□□ -1.22
CSTF1-204ENST00000452950 CPSF6Q16630 551 aaKnown RBP eCLIP7.41□□□□□ -1.22
CSTF1-204ENST00000452950 RRAGBQ5VZM2 374 aa7.41□□□□□ -1.22
CSTF1-204ENST00000452950 KLHL17Q6TDP4 642 aa7.41□□□□□ -1.22
CSTF1-204ENST00000452950 UNC13DQ70J99 1090 aa7.41□□□□□ -1.22
CSTF1-204ENST00000452950 KRTAP1-3Q8IUG1 177 aa7.41□□□□□ -1.22
CSTF1-204ENST00000452950 HERC6Q8IVU3 1022 aa7.41□□□□□ -1.22
CSTF1-204ENST00000452950 SDR16C5Q8N3Y7 309 aa7.41□□□□□ -1.22
CSTF1-204ENST00000452950 TCP11L2Q8N4U5 519 aa7.41□□□□□ -1.22
CSTF1-204ENST00000452950 TSPYL6Q8N831 410 aa7.41□□□□□ -1.22
CSTF1-204ENST00000452950 GLIS1Q8NBF1 620 aa7.41□□□□□ -1.22
CSTF1-204ENST00000452950 WDR48Q8TAF3 677 aa7.41□□□□□ -1.22
CSTF1-204ENST00000452950 CYFIP2Q96F07 1278 aa7.41□□□□□ -1.22
CSTF1-204ENST00000452950 KCNC2Q96PR1 638 aa7.41□□□□□ -1.22
CSTF1-204ENST00000452950 SMURF2Q9HAU4 748 aa7.41□□□□□ -1.22
CSTF1-204ENST00000452950 ZNF212Q9UDV6 495 aa7.41□□□□□ -1.22
CSTF1-204ENST00000452950 GPR34Q9UPC5 381 aa7.41□□□□□ -1.22
CSTF1-204ENST00000452950 SCAF8Q9UPN6 1271 aaKnown RBP7.41□□□□□ -1.22
CSTF1-204ENST00000452950 MED16Q9Y2X0 877 aa7.41□□□□□ -1.22
CSTF1-204ENST00000452950 CTDP1Q9Y5B0 961 aaPredicted RBP7.41□□□□□ -1.22
CSTF1-204ENST00000452950 A0A1W2PPH5 198 aa7.4□□□□□ -1.22
CSTF1-204ENST00000452950 HMX3A6NHT5 357 aa7.4□□□□□ -1.22
CSTF1-204ENST00000452950 NT5C1B-RDH14C9J2C7 533 aa7.4□□□□□ -1.22
CSTF1-204ENST00000452950 PRAMEF4O60810 478 aa7.4□□□□□ -1.22
CSTF1-204ENST00000452950 AHSGP02765 367 aa7.4□□□□□ -1.22
CSTF1-204ENST00000452950 ITGA2BP08514 1039 aa7.4□□□□□ -1.22
CSTF1-204ENST00000452950 KCNJ5P48544 419 aa7.4□□□□□ -1.22
CSTF1-204ENST00000452950 POLE2P56282 527 aa7.4□□□□□ -1.22
CSTF1-204ENST00000452950 DLGAP5Q15398 846 aa7.4□□□□□ -1.22
CSTF1-204ENST00000452950 MEA1Q16626 185 aa7.4□□□□□ -1.22
CSTF1-204ENST00000452950 MSMPQ1L6U9 139 aa7.4□□□□□ -1.22
CSTF1-204ENST00000452950 MST1LQ2TV78 715 aa7.4□□□□□ -1.22
CSTF1-204ENST00000452950 EMC10Q5UCC4 262 aa7.4□□□□□ -1.22
CSTF1-204ENST00000452950 ARL6IP4Q66PJ3 421 aaKnown RBP7.4□□□□□ -1.22
CSTF1-204ENST00000452950 TMCO3Q6UWJ1 677 aa7.4□□□□□ -1.22
CSTF1-204ENST00000452950 FAM43BQ6ZT52 329 aaPredicted RBP7.4□□□□□ -1.22
CSTF1-204ENST00000452950 Q6ZVL8 140 aa7.4□□□□□ -1.22
CSTF1-204ENST00000452950 FAM90A1Q86YD7 464 aa7.4□□□□□ -1.22
CSTF1-204ENST00000452950 GATAD2AQ86YP4 633 aa7.4□□□□□ -1.22
CSTF1-204ENST00000452950 PLD6Q8N2A8 252 aaKnown RBP7.4□□□□□ -1.22
CSTF1-204ENST00000452950 ANKRD52Q8NB46 1076 aa7.4□□□□□ -1.22
CSTF1-204ENST00000452950 OR5AN1Q8NGI8 311 aa7.4□□□□□ -1.22
CSTF1-204ENST00000452950 IPCEF1Q8WWN9 437 aaPredicted RBP7.4□□□□□ -1.22
CSTF1-204ENST00000452950 RFFLQ8WZ73 363 aa7.4□□□□□ -1.22
CSTF1-204ENST00000452950 TIGD1Q96MW7 591 aa7.4□□□□□ -1.22
CSTF1-204ENST00000452950 UHRF1Q96T88 793 aaPredicted RBP7.4□□□□□ -1.22
CSTF1-204ENST00000452950 PDCD2LQ9BRP1 358 aa7.4□□□□□ -1.22
CSTF1-204ENST00000452950 METTL22Q9BUU2 404 aaPredicted RBP7.4□□□□□ -1.22
CSTF1-204ENST00000452950 OSBPL6Q9BZF3 934 aa7.4□□□□□ -1.22
CSTF1-204ENST00000452950 ZNF518BQ9C0D4 1074 aa7.4□□□□□ -1.22
CSTF1-204ENST00000452950 OR10A5Q9H207 317 aa7.4□□□□□ -1.22
CSTF1-204ENST00000452950 LRRC4CQ9HCJ2 640 aa7.4□□□□□ -1.22
CSTF1-204ENST00000452950 PREBQ9HCU5 417 aa7.4□□□□□ -1.22
CSTF1-204ENST00000452950 DTLQ9NZJ0 730 aa7.4□□□□□ -1.22
CSTF1-204ENST00000452950 RGL1Q9NZL6 768 aa7.4□□□□□ -1.22
CSTF1-204ENST00000452950 HERC5Q9UII4 1024 aaKnown RBP7.4□□□□□ -1.22
CSTF1-204ENST00000452950 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.4□□□□□ -1.22
CSTF1-204ENST00000452950 MYBBP1AQ9BQG0 1328 aaKnown RBP7.4□□□□□ -1.22
CSTF1-204ENST00000452950 PNPLA6Q8IY17 1366 aa7.4□□□□□ -1.22
CSTF1-204ENST00000452950 CLIP1P30622 1438 aa7.4□□□□□ -1.22
CSTF1-204ENST00000452950 MROH1Q8NDA8 1641 aa7.4□□□□□ -1.22
CSTF1-204ENST00000452950 GPATCH8Q9UKJ3 1502 aaKnown RBP7.39□□□□□ -1.23
CSTF1-204ENST00000452950 A0A0A6YYK5 440 aaPredicted RBP7.39□□□□□ -1.23
CSTF1-204ENST00000452950 CYP26A1O43174 497 aa7.39□□□□□ -1.23
CSTF1-204ENST00000452950 ASNA1O43681 348 aa7.39□□□□□ -1.23
CSTF1-204ENST00000452950 LTA4HP09960 611 aaKnown RBP7.39□□□□□ -1.23
CSTF1-204ENST00000452950 HDCP19113 662 aa7.39□□□□□ -1.23
CSTF1-204ENST00000452950 CST5P28325 142 aaPredicted RBP7.39□□□□□ -1.23
CSTF1-204ENST00000452950 THBS2P35442 1172 aa7.39□□□□□ -1.23
CSTF1-204ENST00000452950 MAN2A2P49641 1150 aa7.39□□□□□ -1.23
CSTF1-204ENST00000452950 DRG2P55039 364 aaKnown RBP7.39□□□□□ -1.23
CSTF1-204ENST00000452950 UBE3AQ05086 875 aa7.39□□□□□ -1.23
CSTF1-204ENST00000452950 EXOSC9Q06265 439 aaKnown RBP7.39□□□□□ -1.23
CSTF1-204ENST00000452950 FSTL1Q12841 308 aa7.39□□□□□ -1.23
CSTF1-204ENST00000452950 ADAM9Q13443 819 aa7.39□□□□□ -1.23
CSTF1-204ENST00000452950 RAB32Q13637 225 aa7.39□□□□□ -1.23
CSTF1-204ENST00000452950 KRT32Q14532 448 aa7.39□□□□□ -1.23
CSTF1-204ENST00000452950 DGKDQ16760 1214 aa7.39□□□□□ -1.23
CSTF1-204ENST00000452950 ARHGAP15Q53QZ3 475 aa7.39□□□□□ -1.23
CSTF1-204ENST00000452950 FAM26FQ5R3K3 315 aa7.39□□□□□ -1.23
CSTF1-204ENST00000452950 FAM205BPQ63HN1 556 aa7.39□□□□□ -1.23
CSTF1-204ENST00000452950 MICU3Q86XE3 530 aa7.39□□□□□ -1.23
CSTF1-204ENST00000452950 PQLC1Q8N2U9 271 aa7.39□□□□□ -1.23
CSTF1-204ENST00000452950 ANKS4BQ8N8V4 417 aa7.39□□□□□ -1.23
CSTF1-204ENST00000452950 NETO1Q8TDF5 533 aa7.39□□□□□ -1.23
CSTF1-204ENST00000452950 THAP4Q8WY91 577 aa7.39□□□□□ -1.23
CSTF1-204ENST00000452950 TNPO1Q92973 898 aaKnown RBP7.39□□□□□ -1.23
CSTF1-204ENST00000452950 LRRC59Q96AG4 307 aaKnown RBP7.39□□□□□ -1.23
CSTF1-204ENST00000452950 PEX11GQ96HA9 241 aa7.39□□□□□ -1.23
CSTF1-204ENST00000452950 DYDC2Q96IM9 177 aa7.39□□□□□ -1.23
CSTF1-204ENST00000452950 C7orf26Q96N11 449 aa7.39□□□□□ -1.23
CSTF1-204ENST00000452950 PRPF18Q99633 342 aaKnown RBP7.39□□□□□ -1.23
CSTF1-204ENST00000452950 SOX7Q9BT81 388 aa7.39□□□□□ -1.23
CSTF1-204ENST00000452950 BTBD2Q9BX70 525 aa7.39□□□□□ -1.23
CSTF1-204ENST00000452950 HAPLN2Q9GZV7 340 aa7.39□□□□□ -1.23
CSTF1-204ENST00000452950 MLXIPQ9HAP2 919 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms