RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 EXOC4Q96A65 974 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 EAF2Q96CJ1 260 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 MTFMTQ96DP5 389 aaKnown RBP4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 TMEM237Q96Q45 408 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 ALPK1Q96QP1 1244 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 ANO3Q9BYT9 981 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 CD244Q9BZW8 370 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 ZCWPW1Q9H0M4 648 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 DUSP15Q9H1R2 295 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 IPPKQ9H8X2 491 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 TM7SF3Q9NS93 570 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 SEPT11Q9NVA2 429 aaKnown RBP4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 GPATCH2Q9NW75 528 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 MCM9Q9NXL9 1143 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 LIMCH1Q9UPQ0 1083 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 CTNND2Q9UQB3 1225 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 MAN2B2Q9Y2E5 1009 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 DTNAQ9Y4J8 743 aa4.83□□□□□ -1.64
HMGB3P21-201ENST00000452483 IRS2Q9Y4H2 1338 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 WASH4PA8MWX3 477 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 H0YC42 278 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 TAF4O00268 1085 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 UBE2CO00762 179 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 HTRA2O43464 458 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 MSCO60682 206 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 FMO6PO60774 539 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 KERAO60938 352 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 PPFIA2O75334 1257 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 USP2O75604 605 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 MLYCDO95822 493 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 ESR1P03372 595 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 CLEC2LP0C7M8 214 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 MSL3P1P0C860 447 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 HSPA1AP0DMV8 641 aaKnown RBP4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 HSPA1BP0DMV9 641 aaKnown RBP4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 NR2F1P10589 423 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 KITP10721 976 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 SRFP11831 508 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 RXRAP19793 462 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 FGFR4P22455 802 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 ACSL1P33121 698 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 PSMC4P43686 418 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 KIF11P52732 1056 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 IRF9Q00978 393 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 STK4Q13043 487 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 COASYQ13057 564 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 NAA25Q14CX7 972 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 SEC23AQ15436 765 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 NBPF12Q5TAG4 269 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 MAP3K21Q5TCX8 1036 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 THEMIS2Q5TEJ8 643 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 TIGD7Q6NT04 549 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 KLHL17Q6TDP4 642 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 CEP68Q76N32 757 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 C16orf59Q7L2K0 433 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 SZRD1Q7Z422 152 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 C17orf53Q8N3J3 647 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 FIBCD1Q8N539 461 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 UHMK1Q8TAS1 419 aaKnown RBP4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 KCNG4Q8TDN1 519 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 OTUD7AQ8TE49 926 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 PIGOQ8TEQ8 1089 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 TBC1D22AQ8WUA7 517 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 FAM168AQ92567 244 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 KRT35Q92764 455 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 CUL5Q93034 780 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 IQCDQ96DY2 449 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 FAM120BQ96EK7 910 aaKnown RBP4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 RNF125Q96EQ8 232 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 VPS39Q96JC1 886 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 CABS1Q96KC9 395 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 GSDMAQ96QA5 445 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 PTPN18Q99952 460 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 TNMDQ9H2S6 317 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 EPS8L2Q9H6S3 715 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 ZMAT4Q9H898 229 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 ERVMER34-1Q9H9K5 563 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 COQ3Q9NZJ6 369 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 C6orf203Q9P0P8 240 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 SLAMF8Q9P0V8 285 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 DUSP13Q9UII6 198 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 MSRAQ9UJ68 235 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 CBLCQ9ULV8 474 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 TBX20Q9UMR3 447 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 CLCA2Q9UQC9 943 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 KIF3AQ9Y496 699 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 FHOD1Q9Y613 1164 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 AP1M2Q9Y6Q5 423 aa4.82□□□□□ -1.64
HMGB3P21-201ENST00000452483 SHISA3A0PJX4 238 aa4.81□□□□□ -1.64
HMGB3P21-201ENST00000452483 ARHGAP10A1A4S6 786 aa4.81□□□□□ -1.64
HMGB3P21-201ENST00000452483 FAM47E-STBD1D6RA91 191 aa4.81□□□□□ -1.64
HMGB3P21-201ENST00000452483 PTGES3LE9PB15 166 aa4.81□□□□□ -1.64
HMGB3P21-201ENST00000452483 H3BUI4 141 aa4.81□□□□□ -1.64
HMGB3P21-201ENST00000452483 CASQ2O14958 399 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P21-201ENST00000452483 ZBTB14O43829 449 aa4.81□□□□□ -1.64
HMGB3P21-201ENST00000452483 SOCS5O75159 536 aa4.81□□□□□ -1.64
HMGB3P21-201ENST00000452483 FAM155BO75949 473 aa4.81□□□□□ -1.64
HMGB3P21-201ENST00000452483 PDHA1P08559 390 aa4.81□□□□□ -1.64
HMGB3P21-201ENST00000452483 SNRNP70P08621 437 aaKnown RBP4.81□□□□□ -1.64
HMGB3P21-201ENST00000452483 KRT15P19012 456 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms