RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 POU2F2P09086 479 aa10.43□□□□□ -0.74
USP54-207ENST00000451492 DLATP10515 647 aaKnown RBP10.43□□□□□ -0.74
USP54-207ENST00000451492 ALDH1A3P47895 512 aa10.43□□□□□ -0.74
USP54-207ENST00000451492 EPHB3P54753 998 aa10.43□□□□□ -0.74
USP54-207ENST00000451492 GPR17Q13304 367 aa10.43□□□□□ -0.74
USP54-207ENST00000451492 MYBPC2Q14324 1141 aa10.43□□□□□ -0.74
USP54-207ENST00000451492 GRM2Q14416 872 aa10.43□□□□□ -0.74
USP54-207ENST00000451492 BECN1Q14457 450 aa10.43□□□□□ -0.74
USP54-207ENST00000451492 TEAD2Q15562 447 aa10.43□□□□□ -0.74
USP54-207ENST00000451492 PRSS36Q5K4E3 855 aa10.43□□□□□ -0.74
USP54-207ENST00000451492 CYP4A22Q5TCH4 519 aa10.43□□□□□ -0.74
USP54-207ENST00000451492 ASTLQ6HA08 431 aaPredicted RBP10.43□□□□□ -0.74
USP54-207ENST00000451492 POTEHQ6S545 545 aa10.43□□□□□ -0.74
USP54-207ENST00000451492 EPM2AIP1Q7L775 607 aaPredicted RBP10.43□□□□□ -0.74
USP54-207ENST00000451492 NT5DC4Q86YG4 428 aa10.43□□□□□ -0.74
USP54-207ENST00000451492 GPIHBP1Q8IV16 184 aa10.43□□□□□ -0.74
USP54-207ENST00000451492 THEM5Q8N1Q8 247 aa10.43□□□□□ -0.74
USP54-207ENST00000451492 FSIP1Q8NA03 581 aa10.43□□□□□ -0.74
USP54-207ENST00000451492 OR5B17Q8NGF7 314 aa10.43□□□□□ -0.74
USP54-207ENST00000451492 SCFD1Q8WVM8 642 aa10.43□□□□□ -0.74
USP54-207ENST00000451492 PAGE5Q96GU1 130 aa10.43□□□□□ -0.74
USP54-207ENST00000451492 RTP3Q9BQQ7 232 aa10.43□□□□□ -0.74
USP54-207ENST00000451492 DNAJC25Q9H1X3 360 aa10.43□□□□□ -0.74
USP54-207ENST00000451492 ARHGEF3Q9NR81 526 aa10.43□□□□□ -0.74
USP54-207ENST00000451492 DSEQ9UL01 958 aa10.43□□□□□ -0.74
USP54-207ENST00000451492 L1RE1Q9UN81 338 aa10.43□□□□□ -0.74
USP54-207ENST00000451492 SNX9Q9Y5X1 595 aa10.43□□□□□ -0.74
USP54-207ENST00000451492 ZFP37Q9Y6Q3 630 aaPredicted RBP10.43□□□□□ -0.74
USP54-207ENST00000451492 MYH10P35580 1976 aa10.43□□□□□ -0.74
USP54-207ENST00000451492 HELZP42694 1942 aaKnown RBP10.43□□□□□ -0.74
USP54-207ENST00000451492 GREB1Q4ZG55 1949 aa10.43□□□□□ -0.74
USP54-207ENST00000451492 MYO16Q9Y6X6 1858 aa10.42□□□□□ -0.74
USP54-207ENST00000451492 ZNF197O14709 1029 aa10.42□□□□□ -0.74
USP54-207ENST00000451492 TGFB1I1O43294 461 aa10.42□□□□□ -0.74
USP54-207ENST00000451492 PI15O43692 258 aa10.42□□□□□ -0.74
USP54-207ENST00000451492 KLRC4O43908 158 aa10.42□□□□□ -0.74
USP54-207ENST00000451492 HUS1O60921 280 aa10.42□□□□□ -0.74
USP54-207ENST00000451492 CYP11A1P05108 521 aa10.42□□□□□ -0.74
USP54-207ENST00000451492 SLFN14P0C7P3 912 aa10.42□□□□□ -0.74
USP54-207ENST00000451492 NPR3P17342 541 aa10.42□□□□□ -0.74
USP54-207ENST00000451492 TNNI1P19237 187 aa10.42□□□□□ -0.74
USP54-207ENST00000451492 PNPLA4P41247 253 aa10.42□□□□□ -0.74
USP54-207ENST00000451492 SYKP43405 635 aa10.42□□□□□ -0.74
USP54-207ENST00000451492 NDUFA8P51970 172 aa10.42□□□□□ -0.74
USP54-207ENST00000451492 PTPN5P54829 565 aa10.42□□□□□ -0.74
USP54-207ENST00000451492 GPC5P78333 572 aa10.42□□□□□ -0.74
USP54-207ENST00000451492 TCF15Q12870 199 aa10.42□□□□□ -0.74
USP54-207ENST00000451492 PLD1Q13393 1074 aa10.42□□□□□ -0.74
USP54-207ENST00000451492 SNW1Q13573 536 aaKnown RBP10.42□□□□□ -0.74
USP54-207ENST00000451492 SNRNP35Q16560 246 aaKnown RBP10.42□□□□□ -0.74
USP54-207ENST00000451492 CCDC142Q17RM4 750 aa10.42□□□□□ -0.74
USP54-207ENST00000451492 KMT5BQ4FZB7 885 aa10.42□□□□□ -0.74
USP54-207ENST00000451492 STXBP5Q5T5C0 1151 aa10.42□□□□□ -0.74
USP54-207ENST00000451492 TANGO2Q6ICL3 276 aa10.42□□□□□ -0.74
USP54-207ENST00000451492 CENPPQ6IPU0 288 aa10.42□□□□□ -0.74
USP54-207ENST00000451492 RTL10Q7L3V2 364 aa10.42□□□□□ -0.74
USP54-207ENST00000451492 HS2ST1Q7LGA3 356 aa10.42□□□□□ -0.74
USP54-207ENST00000451492 ALYREFQ86V81 257 aaKnown RBP10.42□□□□□ -0.74
USP54-207ENST00000451492 PDCL2Q8N4E4 241 aa10.42□□□□□ -0.74
USP54-207ENST00000451492 ZNF507Q8TCN5 953 aa10.42□□□□□ -0.74
USP54-207ENST00000451492 GIPC2Q8TF65 315 aa10.42□□□□□ -0.74
USP54-207ENST00000451492 NXPE3Q969Y0 559 aa10.42□□□□□ -0.74
USP54-207ENST00000451492 CCDC127Q96BQ5 260 aa10.42□□□□□ -0.74
USP54-207ENST00000451492 FNBP1Q96RU3 617 aa10.42□□□□□ -0.74
USP54-207ENST00000451492 OXCT2Q9BYC2 517 aaPredicted RBP10.42□□□□□ -0.74
USP54-207ENST00000451492 PLA2G2FQ9BZM2 168 aa10.42□□□□□ -0.74
USP54-207ENST00000451492 ZCWPW1Q9H0M4 648 aa10.42□□□□□ -0.74
USP54-207ENST00000451492 GOLPH3LQ9H4A5 285 aa10.42□□□□□ -0.74
USP54-207ENST00000451492 TBC1D17Q9HA65 648 aa10.42□□□□□ -0.74
USP54-207ENST00000451492 ZNF334Q9HCZ1 680 aaPredicted RBP10.42□□□□□ -0.74
USP54-207ENST00000451492 TMLHEQ9NVH6 421 aa10.42□□□□□ -0.74
USP54-207ENST00000451492 SIX4Q9UIU6 781 aa10.42□□□□□ -0.74
USP54-207ENST00000451492 ITGA11Q9UKX5 1188 aa10.42□□□□□ -0.74
USP54-207ENST00000451492 ATP6V1DQ9Y5K8 247 aa10.42□□□□□ -0.74
USP54-207ENST00000451492 KIAA0391O15091 583 aaKnown RBP10.41□□□□□ -0.74
USP54-207ENST00000451492 EXOC3O60645 756 aa10.41□□□□□ -0.74
USP54-207ENST00000451492 DCNP07585 359 aaKnown RBP10.41□□□□□ -0.74
USP54-207ENST00000451492 ATF6P18850 670 aa10.41□□□□□ -0.74
USP54-207ENST00000451492 AOC1P19801 751 aa10.41□□□□□ -0.74
USP54-207ENST00000451492 CMA1P23946 247 aa10.41□□□□□ -0.74
USP54-207ENST00000451492 CASP4P49662 377 aa10.41□□□□□ -0.74
USP54-207ENST00000451492 GPR15P49685 360 aa10.41□□□□□ -0.74
USP54-207ENST00000451492 RBP5P82980 135 aa10.41□□□□□ -0.74
USP54-207ENST00000451492 CYP4F8P98187 520 aa10.41□□□□□ -0.74
USP54-207ENST00000451492 TSPY1Q01534 308 aa10.41□□□□□ -0.74
USP54-207ENST00000451492 POU5F1Q01860 360 aaKnown RBP10.41□□□□□ -0.74
USP54-207ENST00000451492 CYP24A1Q07973 514 aa10.41□□□□□ -0.74
USP54-207ENST00000451492 EHHADHQ08426 723 aa10.41□□□□□ -0.74
USP54-207ENST00000451492 STK4Q13043 487 aa10.41□□□□□ -0.74
USP54-207ENST00000451492 VEPH1Q14D04 833 aa10.41□□□□□ -0.74
USP54-207ENST00000451492 TAF12Q16514 161 aa10.41□□□□□ -0.74
USP54-207ENST00000451492 FAM78AQ5JUQ0 283 aa10.41□□□□□ -0.74
USP54-207ENST00000451492 SDHAF4Q5VUM1 108 aa10.41□□□□□ -0.74
USP54-207ENST00000451492 CNNM4Q6P4Q7 775 aa10.41□□□□□ -0.74
USP54-207ENST00000451492 LRRTM3Q86VH5 581 aa10.41□□□□□ -0.74
USP54-207ENST00000451492 OSTM1Q86WC4 334 aa10.41□□□□□ -0.74
USP54-207ENST00000451492 TMC8Q8IU68 726 aa10.41□□□□□ -0.74
USP54-207ENST00000451492 ADGRF2Q8IZF7 708 aa10.41□□□□□ -0.74
USP54-207ENST00000451492 LRRC52Q8N7C0 313 aa10.41□□□□□ -0.74
USP54-207ENST00000451492 XXYLT1Q8NBI6 393 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms