RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 TXLNAP40222 546 aa29.32■■■□□ 2.28
USP42-204ENST00000451154 RPS9P46781 194 aaKnown RBP29.32■■■□□ 2.28
USP42-204ENST00000451154 TAF6P49848 677 aa29.32■■■□□ 2.28
USP42-204ENST00000451154 GAREM2Q75VX8 874 aa29.32■■■□□ 2.28
USP42-204ENST00000451154 METTL23Q86XA0 190 aa29.32■■■□□ 2.28
USP42-204ENST00000451154 ZNF687Q8N1G0 1237 aa29.32■■■□□ 2.28
USP42-204ENST00000451154 ZSWIM2Q8NEG5 633 aa29.32■■■□□ 2.28
USP42-204ENST00000451154 PSMG2Q969U7 264 aa29.32■■■□□ 2.28
USP42-204ENST00000451154 ACCSQ96QU6 501 aa29.32■■■□□ 2.28
USP42-204ENST00000451154 ZCWPW1Q9H0M4 648 aa29.32■■■□□ 2.28
USP42-204ENST00000451154 SEL1LQ9UBV2 794 aa29.32■■■□□ 2.28
USP42-204ENST00000451154 DSEQ9UL01 958 aa29.32■■■□□ 2.28
USP42-204ENST00000451154 TCHHQ07283 1943 aa29.32■■■□□ 2.28
USP42-204ENST00000451154 GAP43P17677 238 aa29.31■■■□□ 2.28
USP42-204ENST00000451154 POU5F1Q01860 360 aaKnown RBP29.31■■■□□ 2.28
USP42-204ENST00000451154 WSCD1Q658N2 575 aa29.31■■■□□ 2.28
USP42-204ENST00000451154 BORCS6Q96GS4 357 aa29.31■■■□□ 2.28
USP42-204ENST00000451154 USP28Q96RU2 1077 aa29.31■■■□□ 2.28
USP42-204ENST00000451154 FAM213AQ9BRX8 229 aa29.31■■■□□ 2.28
USP42-204ENST00000451154 TRPV5Q9NQA5 729 aa29.31■■■□□ 2.28
USP42-204ENST00000451154 IDEP14735 1019 aa29.3■■■□□ 2.28
USP42-204ENST00000451154 L1TD1Q5T7N2 865 aaKnown RBP29.3■■■□□ 2.28
USP42-204ENST00000451154 TSSK4Q6SA08 328 aa29.3■■■□□ 2.28
USP42-204ENST00000451154 CCDC73Q6ZRK6 1079 aa29.3■■■□□ 2.28
USP42-204ENST00000451154 LRRTM3Q86VH5 581 aa29.3■■■□□ 2.28
USP42-204ENST00000451154 ARID3BQ8IVW6 561 aaPredicted RBP29.3■■■□□ 2.28
USP42-204ENST00000451154 THEM5Q8N1Q8 247 aa29.3■■■□□ 2.28
USP42-204ENST00000451154 FAM3CQ92520 227 aa29.3■■■□□ 2.28
USP42-204ENST00000451154 SEPT5Q99719 369 aaPredicted RBP29.3■■■□□ 2.28
USP42-204ENST00000451154 LPIN3Q9BQK8 851 aa29.3■■■□□ 2.28
USP42-204ENST00000451154 ATXN3LQ9H3M9 355 aa29.3■■■□□ 2.28
USP42-204ENST00000451154 EXOC7Q9UPT5 735 aa29.3■■■□□ 2.28
USP42-204ENST00000451154 MTMR6Q9Y217 621 aa29.3■■■□□ 2.28
USP42-204ENST00000451154 PIAS3Q9Y6X2 628 aa29.3■■■□□ 2.28
USP42-204ENST00000451154 TSC2P49815 1807 aa29.29■■■□□ 2.28
USP42-204ENST00000451154 A0A087X0B3 334 aa29.29■■■□□ 2.28
USP42-204ENST00000451154 KINO60870 393 aaKnown RBP29.29■■■□□ 2.28
USP42-204ENST00000451154 IL18RAPO95256 599 aa29.29■■■□□ 2.28
USP42-204ENST00000451154 GCNT3O95395 438 aa29.29■■■□□ 2.28
USP42-204ENST00000451154 TUFMP49411 452 aaKnown RBP29.29■■■□□ 2.28
USP42-204ENST00000451154 CASP5P51878 434 aa29.29■■■□□ 2.28
USP42-204ENST00000451154 WNT7BP56706 349 aa29.29■■■□□ 2.28
USP42-204ENST00000451154 MTAPQ13126 283 aa29.29■■■□□ 2.28
USP42-204ENST00000451154 SLC39A14Q15043 492 aa29.29■■■□□ 2.28
USP42-204ENST00000451154 MGAT5BQ3V5L5 792 aa29.29■■■□□ 2.28
USP42-204ENST00000451154 YAF2Q8IY57 180 aa29.29■■■□□ 2.28
USP42-204ENST00000451154 FAM200AQ8TCP9 573 aa29.29■■■□□ 2.28
USP42-204ENST00000451154 E2F7Q96AV8 911 aa29.29■■■□□ 2.28
USP42-204ENST00000451154 SAAL1Q96ER3 474 aa29.29■■■□□ 2.28
USP42-204ENST00000451154 HINFPQ9BQA5 517 aa29.29■■■□□ 2.28
USP42-204ENST00000451154 HSFX1Q9UBD0 423 aa29.29■■■□□ 2.28
USP42-204ENST00000451154 KPNA7A9QM74 516 aa29.28■■■□□ 2.28
USP42-204ENST00000451154 GABRR2P28476 465 aa29.28■■■□□ 2.28
USP42-204ENST00000451154 STAT6P42226 847 aa29.28■■■□□ 2.28
USP42-204ENST00000451154 ITIH5Q86UX2 942 aa29.28■■■□□ 2.28
USP42-204ENST00000451154 KIAA2013Q8IYS2 634 aa29.28■■■□□ 2.28
USP42-204ENST00000451154 DCLK2Q8N568 766 aa29.28■■■□□ 2.28
USP42-204ENST00000451154 SUMF1Q8NBK3 374 aa29.28■■■□□ 2.28
USP42-204ENST00000451154 ATRIPQ8WXE1 791 aa29.28■■■□□ 2.28
USP42-204ENST00000451154 INTS4Q96HW7 963 aaKnown RBP29.28■■■□□ 2.28
USP42-204ENST00000451154 LRRC3BQ96PB8 259 aa29.28■■■□□ 2.28
USP42-204ENST00000451154 MKNK1Q9BUB5 465 aa29.28■■■□□ 2.28
USP42-204ENST00000451154 FGFBP2Q9BYJ0 223 aa29.28■■■□□ 2.28
USP42-204ENST00000451154 LMAN1LQ9HAT1 526 aa29.28■■■□□ 2.28
USP42-204ENST00000451154 PCDHB13Q9Y5F0 798 aa29.28■■■□□ 2.28
USP42-204ENST00000451154 ARNTLO00327 626 aa29.27■■■□□ 2.28
USP42-204ENST00000451154 CCNE1P24864 410 aa29.27■■■□□ 2.28
USP42-204ENST00000451154 ID4P47928 161 aa29.27■■■□□ 2.28
USP42-204ENST00000451154 TFAMQ00059 246 aaKnown RBP29.27■■■□□ 2.28
USP42-204ENST00000451154 GPR158Q5T848 1215 aa29.27■■■□□ 2.28
USP42-204ENST00000451154 SYCP3Q8IZU3 236 aa29.27■■■□□ 2.28
USP42-204ENST00000451154 GIPC2Q8TF65 315 aa29.27■■■□□ 2.28
USP42-204ENST00000451154 COL4A2P08572 1712 aa29.26■■■□□ 2.27
USP42-204ENST00000451154 GOLGA8IPA6NC78 632 aa29.26■■■□□ 2.27
USP42-204ENST00000451154 GOLGA8JA6NMD2 632 aa29.26■■■□□ 2.27
USP42-204ENST00000451154 FGF19O95750 216 aa29.26■■■□□ 2.27
USP42-204ENST00000451154 ATF6P18850 670 aa29.26■■■□□ 2.27
USP42-204ENST00000451154 SV2CQ496J9 727 aa29.26■■■□□ 2.27
USP42-204ENST00000451154 SCARA3Q6AZY7 606 aa29.26■■■□□ 2.27
USP42-204ENST00000451154 PDILTQ8N807 584 aa29.26■■■□□ 2.27
USP42-204ENST00000451154 CSGALNACT1Q8TDX6 532 aa29.26■■■□□ 2.27
USP42-204ENST00000451154 RUBCNQ92622 972 aa29.26■■■□□ 2.27
USP42-204ENST00000451154 PANK4Q9NVE7 773 aa29.26■■■□□ 2.27
USP42-204ENST00000451154 ZSCAN32Q9NX65 697 aa29.26■■■□□ 2.27
USP42-204ENST00000451154 PCDHGA2Q9Y5H1 932 aa29.26■■■□□ 2.27
USP42-204ENST00000451154 CHADO15335 359 aa29.25■■■□□ 2.27
USP42-204ENST00000451154 VEPH1Q14D04 833 aa29.25■■■□□ 2.27
USP42-204ENST00000451154 NT5DC4Q86YG4 428 aa29.25■■■□□ 2.27
USP42-204ENST00000451154 FAM84AQ96KN4 292 aa29.25■■■□□ 2.27
USP42-204ENST00000451154 CHRDQ9H2X0 955 aa29.25■■■□□ 2.27
USP42-204ENST00000451154 PCIF1Q9H4Z3 704 aa29.25■■■□□ 2.27
USP42-204ENST00000451154 PRMT8Q9NR22 394 aaPredicted RBP29.25■■■□□ 2.27
USP42-204ENST00000451154 OLFML3Q9NRN5 406 aa29.25■■■□□ 2.27
USP42-204ENST00000451154 AGAP1Q9UPQ3 857 aa29.25■■■□□ 2.27
USP42-204ENST00000451154 FRMD3A2A2Y4 597 aa29.24■■■□□ 2.27
USP42-204ENST00000451154 DPYSL4O14531 572 aa29.24■■■□□ 2.27
USP42-204ENST00000451154 STX6O43752 255 aa29.24■■■□□ 2.27
USP42-204ENST00000451154 HAPLN1P10915 354 aaPredicted RBP29.24■■■□□ 2.27
USP42-204ENST00000451154 GARTP22102 1010 aa29.24■■■□□ 2.27
USP42-204ENST00000451154 CYP4F8P98187 520 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms