RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 ZNF707Q96C28 371 aaPredicted RBP15.43■□□□□ 0.06
COL3A1-203ENST00000450867 MED15Q96RN5 788 aa15.43■□□□□ 0.06
COL3A1-203ENST00000450867 METTL14Q9HCE5 456 aaKnown RBP15.43■□□□□ 0.06
COL3A1-203ENST00000450867 PRKAG3Q9UGI9 489 aa15.43■□□□□ 0.06
COL3A1-203ENST00000450867 AFF4Q9UHB7 1163 aaKnown RBP15.43■□□□□ 0.06
COL3A1-203ENST00000450867 CTNND2Q9UQB3 1225 aa15.43■□□□□ 0.06
COL3A1-203ENST00000450867 R3HCC1Q9Y3T6 440 aaKnown RBP15.43■□□□□ 0.06
COL3A1-203ENST00000450867 STX10O60499 249 aa15.42■□□□□ 0.06
COL3A1-203ENST00000450867 TACC1O75410 805 aa15.42■□□□□ 0.06
COL3A1-203ENST00000450867 VNN2O95498 520 aa15.42■□□□□ 0.06
COL3A1-203ENST00000450867 ASS1P00966 412 aaKnown RBP15.42■□□□□ 0.06
COL3A1-203ENST00000450867 TRIM49P0CI25 452 aa15.42■□□□□ 0.06
COL3A1-203ENST00000450867 TRIM49CP0CI26 452 aa15.42■□□□□ 0.06
COL3A1-203ENST00000450867 NLRP12P59046 1061 aa15.42■□□□□ 0.06
COL3A1-203ENST00000450867 MYL6P60660 151 aa15.42■□□□□ 0.06
COL3A1-203ENST00000450867 NCOA4Q13772 614 aa15.42■□□□□ 0.06
COL3A1-203ENST00000450867 METTL23Q86XA0 190 aa15.42■□□□□ 0.06
COL3A1-203ENST00000450867 OR10T2Q8NGX3 314 aa15.42■□□□□ 0.06
COL3A1-203ENST00000450867 KBTBD7Q8WVZ9 684 aa15.42■□□□□ 0.06
COL3A1-203ENST00000450867 SLC35C1Q96A29 364 aa15.42■□□□□ 0.06
COL3A1-203ENST00000450867 EEF2KMTQ96G04 330 aa15.42■□□□□ 0.06
COL3A1-203ENST00000450867 NECTIN4Q96NY8 510 aa15.42■□□□□ 0.06
COL3A1-203ENST00000450867 ZCWPW1Q9H0M4 648 aa15.42■□□□□ 0.06
COL3A1-203ENST00000450867 TMEM8AQ9HCN3 771 aa15.42■□□□□ 0.06
COL3A1-203ENST00000450867 HSFX1Q9UBD0 423 aa15.42■□□□□ 0.06
COL3A1-203ENST00000450867 ARMCX3Q9UH62 379 aaPredicted RBP15.42■□□□□ 0.06
COL3A1-203ENST00000450867 SNX9Q9Y5X1 595 aa15.42■□□□□ 0.06
COL3A1-203ENST00000450867 GREB1Q4ZG55 1949 aa15.41■□□□□ 0.06
COL3A1-203ENST00000450867 DENND4CQ5VZ89 1909 aa15.41■□□□□ 0.06
COL3A1-203ENST00000450867 PMM2O15305 246 aa15.41■□□□□ 0.06
COL3A1-203ENST00000450867 SPATA31D3P0C874 917 aa15.41■□□□□ 0.06
COL3A1-203ENST00000450867 IL9P15248 144 aa15.41■□□□□ 0.06
COL3A1-203ENST00000450867 ERCC5P28715 1186 aaPredicted RBP15.41■□□□□ 0.06
COL3A1-203ENST00000450867 MTHFRP42898 656 aa15.41■□□□□ 0.06
COL3A1-203ENST00000450867 LHX1P48742 406 aa15.41■□□□□ 0.06
COL3A1-203ENST00000450867 SMARCB1Q12824 385 aa15.41■□□□□ 0.06
COL3A1-203ENST00000450867 BIRC3Q13489 604 aa15.41■□□□□ 0.06
COL3A1-203ENST00000450867 TRPC3Q13507 836 aa15.41■□□□□ 0.06
COL3A1-203ENST00000450867 CBX2Q14781 532 aaPredicted RBP15.41■□□□□ 0.06
COL3A1-203ENST00000450867 SGSM1Q2NKQ1 1148 aa15.41■□□□□ 0.06
COL3A1-203ENST00000450867 DPCR1Q3MIW9 517 aa15.41■□□□□ 0.06
COL3A1-203ENST00000450867 RARS2Q5T160 578 aaKnown RBP15.41■□□□□ 0.06
COL3A1-203ENST00000450867 LIN9Q5TKA1 542 aa15.41■□□□□ 0.06
COL3A1-203ENST00000450867 KRT39Q6A163 491 aa15.41■□□□□ 0.06
COL3A1-203ENST00000450867 CES5AQ6NT32 575 aa15.41■□□□□ 0.06
COL3A1-203ENST00000450867 SPATA31D4Q6ZUB0 917 aa15.41■□□□□ 0.06
COL3A1-203ENST00000450867 CCDC149Q6ZUS6 474 aa15.41■□□□□ 0.06
COL3A1-203ENST00000450867 ADGRF2Q8IZF7 708 aa15.41■□□□□ 0.06
COL3A1-203ENST00000450867 THEM5Q8N1Q8 247 aa15.41■□□□□ 0.06
COL3A1-203ENST00000450867 C12orf76Q8N812 135 aaPredicted RBP15.41■□□□□ 0.06
COL3A1-203ENST00000450867 RIPOR3Q96MK2 946 aa15.41■□□□□ 0.06
COL3A1-203ENST00000450867 PKMYT1Q99640 499 aa15.41■□□□□ 0.06
COL3A1-203ENST00000450867 ACBD6Q9BR61 282 aa15.41■□□□□ 0.06
COL3A1-203ENST00000450867 PRKD2Q9BZL6 878 aa15.41■□□□□ 0.06
COL3A1-203ENST00000450867 COQ4Q9Y3A0 265 aa15.41■□□□□ 0.06
COL3A1-203ENST00000450867 CCDC195A0A1B0GUA6 201 aa15.4■□□□□ 0.06
COL3A1-203ENST00000450867 PHACTR2O75167 634 aa15.4■□□□□ 0.06
COL3A1-203ENST00000450867 RFPL2O75678 378 aa15.4■□□□□ 0.06
COL3A1-203ENST00000450867 GNA14O95837 355 aa15.4■□□□□ 0.06
COL3A1-203ENST00000450867 HLA-DRAP01903 254 aa15.4■□□□□ 0.06
COL3A1-203ENST00000450867 C8AP07357 584 aa15.4■□□□□ 0.06
COL3A1-203ENST00000450867 CPB1P15086 417 aa15.4■□□□□ 0.06
COL3A1-203ENST00000450867 WARSP23381 471 aaKnown RBP15.4■□□□□ 0.06
COL3A1-203ENST00000450867 GCLMP48507 274 aa15.4■□□□□ 0.06
COL3A1-203ENST00000450867 ZNF699Q32M78 642 aa15.4■□□□□ 0.06
COL3A1-203ENST00000450867 WDR72Q3MJ13 1102 aa15.4■□□□□ 0.06
COL3A1-203ENST00000450867 CCDC183Q5T5S1 534 aa15.4■□□□□ 0.06
COL3A1-203ENST00000450867 RNF19BQ6ZMZ0 732 aa15.4■□□□□ 0.06
COL3A1-203ENST00000450867 OSTM1Q86WC4 334 aa15.4■□□□□ 0.06
COL3A1-203ENST00000450867 TRIM59Q8IWR1 403 aa15.4■□□□□ 0.06
COL3A1-203ENST00000450867 FAXDC2Q96IV6 333 aa15.4■□□□□ 0.06
COL3A1-203ENST00000450867 DACH1Q9UI36 760 aa15.4■□□□□ 0.06
COL3A1-203ENST00000450867 MTMR11A4FU01 709 aa15.39■□□□□ 0.05
COL3A1-203ENST00000450867 C19orf67A6NJJ6 358 aa15.39■□□□□ 0.05
COL3A1-203ENST00000450867 SEC24AO95486 1093 aa15.39■□□□□ 0.05
COL3A1-203ENST00000450867 PCSK1P29120 753 aa15.39■□□□□ 0.05
COL3A1-203ENST00000450867 MXI1P50539 228 aa15.39■□□□□ 0.05
COL3A1-203ENST00000450867 STX17P56962 302 aa15.39■□□□□ 0.05
COL3A1-203ENST00000450867 MYL7Q01449 175 aa15.39■□□□□ 0.05
COL3A1-203ENST00000450867 ZP2Q05996 745 aa15.39■□□□□ 0.05
COL3A1-203ENST00000450867 ZNF667Q5HYK9 610 aa15.39■□□□□ 0.05
COL3A1-203ENST00000450867 ATAT1Q5SQI0 421 aa15.39■□□□□ 0.05
COL3A1-203ENST00000450867 TMC5Q6UXY8 1006 aa15.39■□□□□ 0.05
COL3A1-203ENST00000450867 ADHFE1Q8IWW8 467 aa15.39■□□□□ 0.05
COL3A1-203ENST00000450867 SLC7A14Q8TBB6 771 aa15.39■□□□□ 0.05
COL3A1-203ENST00000450867 FEZF2Q8TBJ5 459 aa15.39■□□□□ 0.05
COL3A1-203ENST00000450867 TAS1R2Q8TE23 839 aa15.39■□□□□ 0.05
COL3A1-203ENST00000450867 ADAMTS19Q8TE59 1207 aa15.39■□□□□ 0.05
COL3A1-203ENST00000450867 C2orf15Q8WU43 125 aaKnown RBP15.39■□□□□ 0.05
COL3A1-203ENST00000450867 TMEM209Q96SK2 561 aa15.39■□□□□ 0.05
COL3A1-203ENST00000450867 PHF7Q9BWX1 381 aaPredicted RBP15.39■□□□□ 0.05
COL3A1-203ENST00000450867 OBSL1O75147 1896 aa15.39■□□□□ 0.05
COL3A1-203ENST00000450867 MUC3AQ02505 3323 aa15.39■□□□□ 0.05
COL3A1-203ENST00000450867 MYO10Q9HD67 2058 aa15.39■□□□□ 0.05
COL3A1-203ENST00000450867 TULP1O00294 542 aaPredicted RBP15.38■□□□□ 0.05
COL3A1-203ENST00000450867 FGFR1OPO95684 399 aaKnown RBP15.38■□□□□ 0.05
COL3A1-203ENST00000450867 OR4Q2P0C623 313 aa15.38■□□□□ 0.05
COL3A1-203ENST00000450867 PTMSP20962 102 aa15.38■□□□□ 0.05
COL3A1-203ENST00000450867 PIK3CAP42336 1068 aa15.38■□□□□ 0.05
COL3A1-203ENST00000450867 ARPP19P56211 112 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms