RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 NCOA4Q13772 614 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 SIX1Q15475 284 aaPredicted RBP9.07□□□□□ -0.96
LSM5-208ENST00000450169 SYCP2LQ5T4T6 812 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 C11orf63Q6NUN7 778 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 BORAQ6PGQ7 559 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 RNF207Q6ZRF8 634 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 TTC7BQ86TV6 843 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 SAPCD2Q86UD0 394 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 DAGLBQ8NCG7 672 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 RBM15BQ8NDT2 890 aaKnown RBP9.07□□□□□ -0.96
LSM5-208ENST00000450169 OLIG1Q8TAK6 271 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 SDR42E1Q8WUS8 393 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 RAD54LQ92698 747 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 C9orf72Q96LT7 481 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 PWWP2AQ96N64 755 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 PNMA5Q96PV4 448 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 BTBD9Q96Q07 612 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 TMEM120AQ9BXJ8 343 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 MRPL1Q9BYD6 325 aaKnown RBP9.07□□□□□ -0.96
LSM5-208ENST00000450169 LRRC19Q9H756 370 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 PLGRKTQ9HBL7 147 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 KIAA1586Q9HCI6 787 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 S100A14Q9HCY8 104 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 PLK2Q9NYY3 685 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 GSTTP1A0A1W2PQM5 241 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 FAM170AA1A519 330 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.07□□□□□ -0.96
LSM5-208ENST00000450169 FCHO1O14526 889 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 ZBED1O96006 694 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 ATP6V1B1P15313 513 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 CDH2P19022 906 aaPredicted RBP9.07□□□□□ -0.96
LSM5-208ENST00000450169 PEX2P28328 305 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 RXRGP48443 463 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 NEK2P51955 445 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 ARHGAP4P98171 946 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 FOLH1Q04609 750 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 PKN2Q16513 984 aaKnown RBP9.07□□□□□ -0.96
LSM5-208ENST00000450169 RHOT2Q8IXI1 618 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 VGLL2Q8N8G2 317 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 FBXO27Q8NI29 283 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 GDPD5Q8WTR4 605 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 PPP1R10Q96QC0 940 aaKnown RBP9.07□□□□□ -0.96
LSM5-208ENST00000450169 THTPAQ9BU02 230 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 FGFBP2Q9BYJ0 223 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 DNAJC18Q9H819 358 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 CNNM1Q9NRU3 951 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 ARMCX1Q9P291 453 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 UVRAGQ9P2Y5 699 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 ANAPC5Q9UJX4 755 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 PLA2G4CQ9UP65 541 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 LHX6Q9UPM6 363 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 TRIM17Q9Y577 477 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 NR2E3Q9Y5X4 410 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 AK5Q9Y6K8 562 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 DLEC1Q9Y238 1755 aa9.07□□□□□ -0.96
LSM5-208ENST00000450169 ANKRD62A6NC57 917 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 TYROBPO43914 113 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 ADAM23O75077 832 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 CAMTA2O94983 1202 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 LDHAP00338 332 aaKnown RBP9.06□□□□□ -0.96
LSM5-208ENST00000450169 DLATP10515 647 aaKnown RBP9.06□□□□□ -0.96
LSM5-208ENST00000450169 ATF2P15336 505 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 IVDP26440 423 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 GCAP28676 217 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 RAB15P59190 212 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 KRT81Q14533 505 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 RASA2Q15283 850 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 INAQ16352 499 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 CCDC153Q494R4 210 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 DNAL1Q4LDG9 190 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 FAM91A1Q658Y4 838 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 CYP4F22Q6NT55 531 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 GJB7Q6PEY0 223 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 TMC7Q7Z402 723 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 NLRX1Q86UT6 975 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 ZNF410Q86VK4 478 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 ERI1Q8IV48 349 aaKnown RBP9.06□□□□□ -0.96
LSM5-208ENST00000450169 MARVELD2Q8N4S9 558 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 ICA1LQ8NDH6 482 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 PYDC1Q8WXC3 89 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 ITPKCQ96DU7 683 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 OXNAD1Q96HP4 312 aaPredicted RBP9.06□□□□□ -0.96
LSM5-208ENST00000450169 COX4I2Q96KJ9 171 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 ZMAT2Q96NC0 199 aaKnown RBP9.06□□□□□ -0.96
LSM5-208ENST00000450169 CCT7Q99832 543 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 TRPC7Q9HCX4 862 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 SIX2Q9NPC8 291 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 METRNQ9UJH8 293 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 DOLKQ9UPQ8 538 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 PLCH1Q4KWH8 1693 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 DOCK2Q92608 1830 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 CCDC162PA2VCL2 907 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 FUOMA2VDF0 154 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 WDR91A4D1P6 747 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 SORBS3O60504 671 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 NMT2O60551 498 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 PDE8BO95263 885 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 OXSR1O95747 527 aaPredicted RBP9.06□□□□□ -0.96
LSM5-208ENST00000450169 ABHD2P08910 425 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 XRCC5P13010 732 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms