RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 LIASO43766 372 aa11.96□□□□□ -0.5
SYVN1-204ENST00000449943 ACO1P21399 889 aaKnown RBP11.96□□□□□ -0.5
SYVN1-204ENST00000449943 CCNA1P78396 465 aa11.96□□□□□ -0.5
SYVN1-204ENST00000449943 MKRN3Q13064 507 aaKnown RBP11.96□□□□□ -0.5
SYVN1-204ENST00000449943 PSMD6Q15008 389 aa11.96□□□□□ -0.5
SYVN1-204ENST00000449943 SETDB1Q15047 1291 aa11.96□□□□□ -0.5
SYVN1-204ENST00000449943 TXNRD3NBQ6F5E7 133 aa11.96□□□□□ -0.5
SYVN1-204ENST00000449943 ERICH1Q86X53 443 aa11.96□□□□□ -0.5
SYVN1-204ENST00000449943 SMC6Q96SB8 1091 aa11.96□□□□□ -0.5
SYVN1-204ENST00000449943 PLCD4Q9BRC7 762 aa11.96□□□□□ -0.5
SYVN1-204ENST00000449943 NTPCRQ9BSD7 190 aaKnown RBP11.96□□□□□ -0.5
SYVN1-204ENST00000449943 TMEM121Q9BTD3 319 aa11.96□□□□□ -0.5
SYVN1-204ENST00000449943 KIAA1586Q9HCI6 787 aa11.96□□□□□ -0.5
SYVN1-204ENST00000449943 PARVAQ9NVD7 372 aa11.96□□□□□ -0.5
SYVN1-204ENST00000449943 SAE1Q9UBE0 346 aaPredicted RBP11.96□□□□□ -0.5
SYVN1-204ENST00000449943 PHTF1Q9UMS5 762 aa11.96□□□□□ -0.5
SYVN1-204ENST00000449943 WNT10BO00744 389 aa11.95□□□□□ -0.5
SYVN1-204ENST00000449943 ATP11AP98196 1134 aa11.95□□□□□ -0.5
SYVN1-204ENST00000449943 PDIA2Q13087 525 aaKnown RBP11.95□□□□□ -0.5
SYVN1-204ENST00000449943 SNRNP48Q6IEG0 339 aaKnown RBP11.95□□□□□ -0.5
SYVN1-204ENST00000449943 LPAR1Q92633 364 aa11.95□□□□□ -0.5
SYVN1-204ENST00000449943 GMLQ99445 158 aa11.95□□□□□ -0.5
SYVN1-204ENST00000449943 FERMT1Q9BQL6 677 aa11.95□□□□□ -0.5
SYVN1-204ENST00000449943 PRKAG3Q9UGI9 489 aa11.95□□□□□ -0.5
SYVN1-204ENST00000449943 RPA3P35244 121 aaPredicted RBP11.95□□□□□ -0.5
SYVN1-204ENST00000449943 EMC2Q15006 297 aa11.95□□□□□ -0.5
SYVN1-204ENST00000449943 SCARA5Q6ZMJ2 495 aa11.95□□□□□ -0.5
SYVN1-204ENST00000449943 C15orf39Q6ZRI6 1047 aa11.95□□□□□ -0.5
SYVN1-204ENST00000449943 APOBEC3FQ8IUX4 373 aaKnown RBP11.95□□□□□ -0.5
SYVN1-204ENST00000449943 NOP53Q9NZM5 478 aaKnown RBP11.95□□□□□ -0.5
SYVN1-204ENST00000449943 DNALI1O14645 258 aaPredicted RBP11.95□□□□□ -0.5
SYVN1-204ENST00000449943 TCEA3O75764 348 aa11.95□□□□□ -0.5
SYVN1-204ENST00000449943 BRD2P25440 801 aaKnown RBP11.95□□□□□ -0.5
SYVN1-204ENST00000449943 ACTR2P61160 394 aa11.95□□□□□ -0.5
SYVN1-204ENST00000449943 CYP4A22Q5TCH4 519 aa11.95□□□□□ -0.5
SYVN1-204ENST00000449943 HHATQ5VTY9 493 aa11.95□□□□□ -0.5
SYVN1-204ENST00000449943 DNAJC24Q6P3W2 148 aa11.95□□□□□ -0.5
SYVN1-204ENST00000449943 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.95□□□□□ -0.5
SYVN1-204ENST00000449943 ZBTB33Q86T24 672 aa11.95□□□□□ -0.5
SYVN1-204ENST00000449943 ZBTB8OSQ8IWT0 167 aa11.95□□□□□ -0.5
SYVN1-204ENST00000449943 LRRC8CQ8TDW0 803 aa11.95□□□□□ -0.5
SYVN1-204ENST00000449943 SLITRK1Q96PX8 696 aa11.95□□□□□ -0.5
SYVN1-204ENST00000449943 HAPLN2Q9GZV7 340 aa11.95□□□□□ -0.5
SYVN1-204ENST00000449943 C17orf75Q9HAS0 396 aa11.95□□□□□ -0.5
SYVN1-204ENST00000449943 FBXO40Q9UH90 709 aa11.95□□□□□ -0.5
SYVN1-204ENST00000449943 IP6K2Q9UHH9 426 aa11.95□□□□□ -0.5
SYVN1-204ENST00000449943 EIF4E1BA6NMX2 242 aaKnown RBP11.94□□□□□ -0.5
SYVN1-204ENST00000449943 K7ERI5 159 aa11.94□□□□□ -0.5
SYVN1-204ENST00000449943 TJP3O95049 919 aa11.94□□□□□ -0.5
SYVN1-204ENST00000449943 RIPK1Q13546 671 aa11.94□□□□□ -0.5
SYVN1-204ENST00000449943 FAM182AQ5T1J6 154 aa11.94□□□□□ -0.5
SYVN1-204ENST00000449943 FAM160B1Q5W0V3 765 aa11.94□□□□□ -0.5
SYVN1-204ENST00000449943 TRABD2AQ86V40 505 aa11.94□□□□□ -0.5
SYVN1-204ENST00000449943 VSIG10LQ86VR7 867 aa11.94□□□□□ -0.5
SYVN1-204ENST00000449943 ASAP3Q8TDY4 903 aa11.94□□□□□ -0.5
SYVN1-204ENST00000449943 MAML1Q92585 1016 aa11.94□□□□□ -0.5
SYVN1-204ENST00000449943 ARHGAP28Q9P2N2 729 aa11.94□□□□□ -0.5
SYVN1-204ENST00000449943 SLC9A2Q9UBY0 812 aa11.94□□□□□ -0.5
SYVN1-204ENST00000449943 HAO1Q9UJM8 370 aa11.94□□□□□ -0.5
SYVN1-204ENST00000449943 C15orf41Q9Y2V0 281 aa11.94□□□□□ -0.5
SYVN1-204ENST00000449943 ZNFX1Q9P2E3 1918 aaKnown RBP11.94□□□□□ -0.5
SYVN1-204ENST00000449943 A0A1W2PPM1 405 aa11.94□□□□□ -0.5
SYVN1-204ENST00000449943 SPARCL1Q14515 664 aa11.94□□□□□ -0.5
SYVN1-204ENST00000449943 EFTUD2Q15029 972 aaKnown RBP eCLIP11.94□□□□□ -0.54e-7■■■■□ 25.5
SYVN1-204ENST00000449943 SMTNL2Q2TAL5 461 aa11.94□□□□□ -0.5
SYVN1-204ENST00000449943 PLEKHA7Q6IQ23 1121 aa11.94□□□□□ -0.5
SYVN1-204ENST00000449943 CRELD2Q6UXH1 353 aaPredicted RBP11.94□□□□□ -0.5
SYVN1-204ENST00000449943 ANKLE1Q8NAG6 615 aa11.94□□□□□ -0.5
SYVN1-204ENST00000449943 RBM41Q96IZ5 413 aaKnown RBP11.94□□□□□ -0.5
SYVN1-204ENST00000449943 ZWILCHQ9H900 591 aa11.94□□□□□ -0.5
SYVN1-204ENST00000449943 ARHGEF3Q9NR81 526 aa11.94□□□□□ -0.5
SYVN1-204ENST00000449943 SUFUQ9UMX1 484 aa11.94□□□□□ -0.5
SYVN1-204ENST00000449943 FZD1Q9UP38 647 aa11.94□□□□□ -0.5
SYVN1-204ENST00000449943 AGTPBP1Q9UPW5 1226 aa11.94□□□□□ -0.5
SYVN1-204ENST00000449943 LOXHD1Q8IVV2 1947 aa11.94□□□□□ -0.5
SYVN1-204ENST00000449943 A0A1B0GUA9 196 aa11.94□□□□□ -0.5
SYVN1-204ENST00000449943 KCNA2P16389 499 aa11.94□□□□□ -0.5
SYVN1-204ENST00000449943 OSBPP22059 807 aa11.94□□□□□ -0.5
SYVN1-204ENST00000449943 GCAP28676 217 aa11.94□□□□□ -0.5
SYVN1-204ENST00000449943 LMNB2Q03252 620 aa11.94□□□□□ -0.5
SYVN1-204ENST00000449943 PTP4A2Q12974 167 aa11.94□□□□□ -0.5
SYVN1-204ENST00000449943 NCOA4Q13772 614 aa11.94□□□□□ -0.5
SYVN1-204ENST00000449943 TRIM72Q6ZMU5 477 aa11.94□□□□□ -0.5
SYVN1-204ENST00000449943 FAM83AQ86UY5 434 aa11.94□□□□□ -0.5
SYVN1-204ENST00000449943 CCHCR1Q8TD31 782 aa11.94□□□□□ -0.5
SYVN1-204ENST00000449943 KIAA1683Q9H0B3 1180 aa11.94□□□□□ -0.5
SYVN1-204ENST00000449943 GOLGA8RI6L899 631 aa11.94□□□□□ -0.5
SYVN1-204ENST00000449943 VWA5AO00534 786 aa11.94□□□□□ -0.5
SYVN1-204ENST00000449943 GAD2Q05329 585 aa11.94□□□□□ -0.5
SYVN1-204ENST00000449943 RNASELQ05823 741 aaKnown RBP11.94□□□□□ -0.5
SYVN1-204ENST00000449943 SPOCD1Q6ZMY3 1216 aa11.94□□□□□ -0.5
SYVN1-204ENST00000449943 RCOR2Q8IZ40 523 aa11.94□□□□□ -0.5
SYVN1-204ENST00000449943 ZNF606Q8WXB4 792 aa11.94□□□□□ -0.5
SYVN1-204ENST00000449943 WRNIP1Q96S55 665 aa11.94□□□□□ -0.5
SYVN1-204ENST00000449943 KLF6Q99612 283 aaPredicted RBP11.94□□□□□ -0.5
SYVN1-204ENST00000449943 GRID1Q9ULK0 1009 aa11.94□□□□□ -0.5
SYVN1-204ENST00000449943 STBD1O95210 358 aa11.93□□□□□ -0.5
SYVN1-204ENST00000449943 RNF43Q68DV7 783 aa11.93□□□□□ -0.5
SYVN1-204ENST00000449943 TLDC1Q6P9B6 456 aa11.93□□□□□ -0.5
SYVN1-204ENST00000449943 L3MBTL3Q96JM7 780 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms