RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 PCMTD2Q9NV79 361 aa10.91□□□□□ -0.66
CTC1-202ENST00000449476 C3orf70A6NLC5 250 aaPredicted RBP10.91□□□□□ -0.66
CTC1-202ENST00000449476 PSTPIP1O43586 416 aa10.91□□□□□ -0.66
CTC1-202ENST00000449476 ITGA4P13612 1032 aa10.91□□□□□ -0.66
CTC1-202ENST00000449476 SERPINB9P50453 376 aa10.91□□□□□ -0.66
CTC1-202ENST00000449476 AGGF1Q8N302 714 aaeCLIP10.91□□□□□ -0.66
CTC1-202ENST00000449476 CENPKQ9BS16 269 aa10.91□□□□□ -0.66
CTC1-202ENST00000449476 TRIM62Q9BVG3 475 aa10.91□□□□□ -0.66
CTC1-202ENST00000449476 ANLNQ9NQW6 1124 aa10.91□□□□□ -0.66
CTC1-202ENST00000449476 ABCF3Q9NUQ8 709 aa10.91□□□□□ -0.66
CTC1-202ENST00000449476 CCDC78A2IDD5 438 aa10.9□□□□□ -0.66
CTC1-202ENST00000449476 SLITRK3O94933 977 aa10.9□□□□□ -0.66
CTC1-202ENST00000449476 NAMPTP43490 491 aa10.9□□□□□ -0.66
CTC1-202ENST00000449476 RARRES1P49788 294 aa10.9□□□□□ -0.66
CTC1-202ENST00000449476 SLC15A2Q16348 729 aa10.9□□□□□ -0.66
CTC1-202ENST00000449476 KDELC2Q7Z4H8 507 aa10.9□□□□□ -0.66
CTC1-202ENST00000449476 KIF2BQ8N4N8 673 aa10.9□□□□□ -0.66
CTC1-202ENST00000449476 CAVIN3Q969G5 261 aa10.9□□□□□ -0.66
CTC1-202ENST00000449476 MTMR12Q9C0I1 747 aa10.9□□□□□ -0.66
CTC1-202ENST00000449476 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.9□□□□□ -0.66
CTC1-202ENST00000449476 RIC1Q4ADV7 1423 aa10.9□□□□□ -0.66
CTC1-202ENST00000449476 RGL2O15211 777 aa10.9□□□□□ -0.66
CTC1-202ENST00000449476 GAS2O43903 313 aaKnown RBP10.9□□□□□ -0.66
CTC1-202ENST00000449476 CAND2O75155 1236 aa10.9□□□□□ -0.66
CTC1-202ENST00000449476 BACE1P56817 501 aa10.9□□□□□ -0.66
CTC1-202ENST00000449476 CUL3Q13618 768 aa10.9□□□□□ -0.66
CTC1-202ENST00000449476 BOLA3Q53S33 107 aa10.9□□□□□ -0.66
CTC1-202ENST00000449476 MDH1BQ5I0G3 518 aa10.9□□□□□ -0.66
CTC1-202ENST00000449476 FRA10AC1Q70Z53 315 aa10.9□□□□□ -0.66
CTC1-202ENST00000449476 PRPF31Q8WWY3 499 aaKnown RBP10.9□□□□□ -0.66
CTC1-202ENST00000449476 MTMR9Q96QG7 549 aa10.9□□□□□ -0.66
CTC1-202ENST00000449476 ZBTB18Q99592 522 aa10.9□□□□□ -0.66
CTC1-202ENST00000449476 LBHD1Q9BQE6 289 aaPredicted RBP10.9□□□□□ -0.66
CTC1-202ENST00000449476 SARS2Q9NP81 518 aaKnown RBP10.9□□□□□ -0.66
CTC1-202ENST00000449476 L3MBTL1Q9Y468 752 aa10.9□□□□□ -0.66
CTC1-202ENST00000449476 SUPT20HL2P0C7V6 817 aa10.9□□□□□ -0.66
CTC1-202ENST00000449476 CACNB2Q08289 660 aaPredicted RBP10.9□□□□□ -0.66
CTC1-202ENST00000449476 HIC1Q14526 733 aa10.9□□□□□ -0.66
CTC1-202ENST00000449476 EFTUD2Q15029 972 aaKnown RBP eCLIP10.9□□□□□ -0.662e-6■■■■□ 19.6
CTC1-202ENST00000449476 PCNX4Q63HM2 1172 aa10.9□□□□□ -0.66
CTC1-202ENST00000449476 OTOP1Q7RTM1 612 aa10.9□□□□□ -0.66
CTC1-202ENST00000449476 OSBPL1AQ9BXW6 950 aa10.9□□□□□ -0.66
CTC1-202ENST00000449476 MRPL46Q9H2W6 279 aaKnown RBP10.9□□□□□ -0.66
CTC1-202ENST00000449476 KCND1Q9NSA2 647 aa10.9□□□□□ -0.66
CTC1-202ENST00000449476 ZBTB24O43167 697 aaPredicted RBP10.9□□□□□ -0.67
CTC1-202ENST00000449476 ZNF189O75820 626 aaPredicted RBP10.9□□□□□ -0.67
CTC1-202ENST00000449476 SASH3O75995 380 aa10.9□□□□□ -0.67
CTC1-202ENST00000449476 CD4P01730 458 aa10.9□□□□□ -0.67
CTC1-202ENST00000449476 NLRP11P59045 1033 aaKnown RBP10.9□□□□□ -0.67
CTC1-202ENST00000449476 PHEXP78562 749 aa10.9□□□□□ -0.67
CTC1-202ENST00000449476 NDUFAF2Q8N183 169 aa10.9□□□□□ -0.67
CTC1-202ENST00000449476 DTX3LQ8TDB6 740 aa10.9□□□□□ -0.67
CTC1-202ENST00000449476 GIPC2Q8TF65 315 aa10.9□□□□□ -0.67
CTC1-202ENST00000449476 TRIM15Q9C019 465 aa10.9□□□□□ -0.67
CTC1-202ENST00000449476 TRPV6Q9H1D0 765 aa10.9□□□□□ -0.67
CTC1-202ENST00000449476 AGO4Q9HCK5 861 aaKnown RBP10.9□□□□□ -0.67
CTC1-202ENST00000449476 MRPL40Q9NQ50 206 aaKnown RBP10.9□□□□□ -0.67
CTC1-202ENST00000449476 UBA6A0AVT1 1052 aaPredicted RBP10.89□□□□□ -0.67
CTC1-202ENST00000449476 CYP2C9P11712 490 aa10.89□□□□□ -0.67
CTC1-202ENST00000449476 STIP1P31948 543 aaKnown RBP10.89□□□□□ -0.67
CTC1-202ENST00000449476 CTCFP49711 727 aaPredicted RBP10.89□□□□□ -0.67
CTC1-202ENST00000449476 CYP24A1Q07973 514 aa10.89□□□□□ -0.67
CTC1-202ENST00000449476 DCAF6Q58WW2 860 aa10.89□□□□□ -0.67
CTC1-202ENST00000449476 LONP2Q86WA8 852 aa10.89□□□□□ -0.67
CTC1-202ENST00000449476 URGCPQ8TCY9 931 aa10.89□□□□□ -0.67
CTC1-202ENST00000449476 YIPF3Q9GZM5 350 aa10.89□□□□□ -0.67
CTC1-202ENST00000449476 VCAM1P19320 739 aa10.89□□□□□ -0.67
CTC1-202ENST00000449476 GEMIN4P57678 1058 aaKnown RBP10.89□□□□□ -0.67
CTC1-202ENST00000449476 GRIK5Q16478 980 aa10.89□□□□□ -0.67
CTC1-202ENST00000449476 GOLGA7BQ2TAP0 167 aa10.89□□□□□ -0.67
CTC1-202ENST00000449476 KCNT1Q5JUK3 1230 aa10.89□□□□□ -0.67
CTC1-202ENST00000449476 APOBEC3HQ6NTF7 200 aaKnown RBP10.89□□□□□ -0.67
CTC1-202ENST00000449476 ANO5Q75V66 913 aa10.89□□□□□ -0.67
CTC1-202ENST00000449476 SAMD3Q8N6K7 520 aa10.89□□□□□ -0.67
CTC1-202ENST00000449476 CDC42EP4Q9H3Q1 356 aaKnown RBP10.89□□□□□ -0.67
CTC1-202ENST00000449476 KRT82Q9NSB4 513 aa10.89□□□□□ -0.67
CTC1-202ENST00000449476 EML1O00423 815 aa10.89□□□□□ -0.67
CTC1-202ENST00000449476 DDX3XO00571 662 aaKnown RBP eCLIP10.89□□□□□ -0.67
CTC1-202ENST00000449476 TNPO2O14787 897 aaKnown RBP10.89□□□□□ -0.67
CTC1-202ENST00000449476 PFDN1O60925 122 aa10.89□□□□□ -0.67
CTC1-202ENST00000449476 PROSCO94903 275 aa10.89□□□□□ -0.67
CTC1-202ENST00000449476 PTENP60484 403 aa10.89□□□□□ -0.67
CTC1-202ENST00000449476 SNAPC2Q13487 334 aa10.89□□□□□ -0.67
CTC1-202ENST00000449476 CREG2Q8IUH2 290 aa10.89□□□□□ -0.67
CTC1-202ENST00000449476 GLIS3Q8NEA6 775 aa10.89□□□□□ -0.67
CTC1-202ENST00000449476 USP33Q8TEY7 942 aa10.89□□□□□ -0.67
CTC1-202ENST00000449476 SIK3Q9Y2K2 1263 aa10.89□□□□□ -0.67
CTC1-202ENST00000449476 RNF103-CHMP3A0A140T963 221 aa10.89□□□□□ -0.67
CTC1-202ENST00000449476 EEF2KO00418 725 aaKnown RBP10.89□□□□□ -0.67
CTC1-202ENST00000449476 PJA2O43164 708 aa10.89□□□□□ -0.67
CTC1-202ENST00000449476 KLRC4O43908 158 aa10.89□□□□□ -0.67
CTC1-202ENST00000449476 CTSHP09668 335 aa10.89□□□□□ -0.67
CTC1-202ENST00000449476 CPB1P15086 417 aa10.89□□□□□ -0.67
CTC1-202ENST00000449476 ACADSBP45954 432 aa10.89□□□□□ -0.67
CTC1-202ENST00000449476 ORC1Q13415 861 aa10.89□□□□□ -0.67
CTC1-202ENST00000449476 ZNF235Q14590 738 aa10.89□□□□□ -0.67
CTC1-202ENST00000449476 SLC40A1Q9NP59 571 aa10.89□□□□□ -0.67
CTC1-202ENST00000449476 PXMP2Q9NR77 195 aa10.89□□□□□ -0.67
CTC1-202ENST00000449476 WHRNQ9P202 907 aa10.89□□□□□ -0.67
CTC1-202ENST00000449476 A0A0U1RQJ8 604 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms