RNA–Protein interactions for RNA: ENST00000449413.1

HLA-DRB9-201, Transcript of major histocompatibility complex, class II, DR beta 9 (pseudogene), humanhuman

BASIC

Gene HLA-DRB9, Length 343 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB9-201ENST00000449413 FAM124BQ9H5Z6 455 aaPredicted RBP13.59□□□□□ -0.23
HLA-DRB9-201ENST00000449413 CYP3A43Q9HB55 503 aa13.59□□□□□ -0.23
HLA-DRB9-201ENST00000449413 CISHQ9NSE2 258 aa13.59□□□□□ -0.23
HLA-DRB9-201ENST00000449413 SPTLC3Q9NUV7 552 aa13.59□□□□□ -0.23
HLA-DRB9-201ENST00000449413 RNF216Q9NWF9 866 aaPredicted RBP13.59□□□□□ -0.23
HLA-DRB9-201ENST00000449413 MSRAQ9UJ68 235 aa13.59□□□□□ -0.23
HLA-DRB9-201ENST00000449413 NOCTQ9UK39 431 aaKnown RBP13.59□□□□□ -0.23
HLA-DRB9-201ENST00000449413 LRFN2Q9ULH4 789 aa13.59□□□□□ -0.23
HLA-DRB9-201ENST00000449413 CNTN6Q9UQ52 1028 aa13.59□□□□□ -0.23
HLA-DRB9-201ENST00000449413 PPP2R2CQ9Y2T4 447 aa13.59□□□□□ -0.23
HLA-DRB9-201ENST00000449413 PCDHB7Q9Y5E2 793 aa13.59□□□□□ -0.23
HLA-DRB9-201ENST00000449413 EPN1Q9Y6I3 576 aaPredicted RBP13.59□□□□□ -0.23
HLA-DRB9-201ENST00000449413 CCP110O43303 1012 aa13.58□□□□□ -0.24
HLA-DRB9-201ENST00000449413 CSF2RAP15509 400 aa13.58□□□□□ -0.24
HLA-DRB9-201ENST00000449413 CYP11B1P15538 503 aa13.58□□□□□ -0.24
HLA-DRB9-201ENST00000449413 CLCN1P35523 988 aa13.58□□□□□ -0.24
HLA-DRB9-201ENST00000449413 CLCNKBP51801 687 aa13.58□□□□□ -0.24
HLA-DRB9-201ENST00000449413 INCA1Q0VD86 236 aa13.58□□□□□ -0.24
HLA-DRB9-201ENST00000449413 IKBKEQ14164 716 aa13.58□□□□□ -0.24
HLA-DRB9-201ENST00000449413 PSRC1Q6PGN9 363 aaPredicted RBP13.58□□□□□ -0.24
HLA-DRB9-201ENST00000449413 C16orf59Q7L2K0 433 aa13.58□□□□□ -0.24
HLA-DRB9-201ENST00000449413 NOP9Q86U38 636 aaKnown RBP13.58□□□□□ -0.24
HLA-DRB9-201ENST00000449413 SLC47A2Q86VL8 602 aa13.58□□□□□ -0.24
HLA-DRB9-201ENST00000449413 ABI1Q8IZP0 508 aa13.58□□□□□ -0.24
HLA-DRB9-201ENST00000449413 SLC20A1Q8WUM9 679 aa13.58□□□□□ -0.24
HLA-DRB9-201ENST00000449413 RSPH1Q8WYR4 309 aa13.58□□□□□ -0.24
HLA-DRB9-201ENST00000449413 EPHX3Q9H6B9 360 aa13.58□□□□□ -0.24
HLA-DRB9-201ENST00000449413 KCND1Q9NSA2 647 aa13.58□□□□□ -0.24
HLA-DRB9-201ENST00000449413 TBC1D13Q9NVG8 400 aa13.58□□□□□ -0.24
HLA-DRB9-201ENST00000449413 CACNG4Q9UBN1 327 aa13.58□□□□□ -0.24
HLA-DRB9-201ENST00000449413 SNX9Q9Y5X1 595 aa13.58□□□□□ -0.24
HLA-DRB9-201ENST00000449413 ADGRG1Q9Y653 693 aa13.58□□□□□ -0.24
HLA-DRB9-201ENST00000449413 USP27XA6NNY8 438 aa13.57□□□□□ -0.24
HLA-DRB9-201ENST00000449413 KPNA7A9QM74 516 aa13.57□□□□□ -0.24
HLA-DRB9-201ENST00000449413 SPTLC1O15269 473 aa13.57□□□□□ -0.24
HLA-DRB9-201ENST00000449413 EFCAB14O75071 495 aa13.57□□□□□ -0.24
HLA-DRB9-201ENST00000449413 CILPO75339 1184 aa13.57□□□□□ -0.24
HLA-DRB9-201ENST00000449413 LCA5LO95447 670 aa13.57□□□□□ -0.24
HLA-DRB9-201ENST00000449413 WEE2P0C1S8 567 aa13.57□□□□□ -0.24
HLA-DRB9-201ENST00000449413 GNA15P30679 374 aa13.57□□□□□ -0.24
HLA-DRB9-201ENST00000449413 RPL9P32969 192 aaKnown RBP13.57□□□□□ -0.24
HLA-DRB9-201ENST00000449413 GATMP50440 423 aa13.57□□□□□ -0.24
HLA-DRB9-201ENST00000449413 GFPT1Q06210 699 aaPredicted RBP13.57□□□□□ -0.24
HLA-DRB9-201ENST00000449413 DSC1Q08554 894 aa13.57□□□□□ -0.24
HLA-DRB9-201ENST00000449413 BMS1Q14692 1282 aaKnown RBP13.57□□□□□ -0.24
HLA-DRB9-201ENST00000449413 SLC18A3Q16572 532 aa13.57□□□□□ -0.24
HLA-DRB9-201ENST00000449413 CCAR2Q8N163 923 aaKnown RBP13.57□□□□□ -0.24
HLA-DRB9-201ENST00000449413 CRIPAKQ8N1N5 446 aa13.57□□□□□ -0.24
HLA-DRB9-201ENST00000449413 TTC39CQ8N584 583 aa13.57□□□□□ -0.24
HLA-DRB9-201ENST00000449413 C3orf58Q8NDZ4 430 aa13.57□□□□□ -0.24
HLA-DRB9-201ENST00000449413 LNX1Q8TBB1 728 aaPredicted RBP13.57□□□□□ -0.24
HLA-DRB9-201ENST00000449413 PPP1R13BQ96KQ4 1090 aa13.57□□□□□ -0.24
HLA-DRB9-201ENST00000449413 MMS19Q96T76 1030 aa13.57□□□□□ -0.24
HLA-DRB9-201ENST00000449413 MRPL9Q9BYD2 267 aaKnown RBP13.57□□□□□ -0.24
HLA-DRB9-201ENST00000449413 SLC28A3Q9HAS3 691 aa13.57□□□□□ -0.24
HLA-DRB9-201ENST00000449413 ACP6Q9NPH0 428 aa13.57□□□□□ -0.24
HLA-DRB9-201ENST00000449413 GDAP2Q9NXN4 497 aa13.57□□□□□ -0.24
HLA-DRB9-201ENST00000449413 HMGXB4Q9UGU5 601 aa13.57□□□□□ -0.24
HLA-DRB9-201ENST00000449413 NENFQ9UMX5 172 aa13.57□□□□□ -0.24
HLA-DRB9-201ENST00000449413 REXO2Q9Y3B8 237 aaKnown RBP13.57□□□□□ -0.24
HLA-DRB9-201ENST00000449413 ATP8B3O60423 1300 aa13.57□□□□□ -0.24
HLA-DRB9-201ENST00000449413 VWA8A3KMH1 1905 aa13.56□□□□□ -0.24
HLA-DRB9-201ENST00000449413 A0A087X0T9 212 aa13.56□□□□□ -0.24
HLA-DRB9-201ENST00000449413 ABHD14A-ACY1A0A1B0GW23 586 aa13.56□□□□□ -0.24
HLA-DRB9-201ENST00000449413 ZNF263O14978 683 aa13.56□□□□□ -0.24
HLA-DRB9-201ENST00000449413 ZSCAN12O43309 604 aa13.56□□□□□ -0.24
HLA-DRB9-201ENST00000449413 B4GALT3O60512 393 aa13.56□□□□□ -0.24
HLA-DRB9-201ENST00000449413 GPR37L1O60883 481 aa13.56□□□□□ -0.24
HLA-DRB9-201ENST00000449413 BAIAP3O94812 1187 aa13.56□□□□□ -0.24
HLA-DRB9-201ENST00000449413 FAM228BP0C875 321 aa13.56□□□□□ -0.24
HLA-DRB9-201ENST00000449413 CDH8P55286 799 aa13.56□□□□□ -0.24
HLA-DRB9-201ENST00000449413 BPIFB4P59827 614 aa13.56□□□□□ -0.24
HLA-DRB9-201ENST00000449413 LILRA4P59901 499 aa13.56□□□□□ -0.24
HLA-DRB9-201ENST00000449413 KRT83P78385 493 aa13.56□□□□□ -0.24
HLA-DRB9-201ENST00000449413 CDR2Q01850 454 aa13.56□□□□□ -0.24
HLA-DRB9-201ENST00000449413 TFF2Q03403 129 aa13.56□□□□□ -0.24
HLA-DRB9-201ENST00000449413 SPA17Q15506 151 aa13.56□□□□□ -0.24
HLA-DRB9-201ENST00000449413 UPP1Q16831 310 aa13.56□□□□□ -0.24
HLA-DRB9-201ENST00000449413 TAF3Q5VWG9 929 aa13.56□□□□□ -0.24
HLA-DRB9-201ENST00000449413 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.56□□□□□ -0.24
HLA-DRB9-201ENST00000449413 ZNF677Q86XU0 584 aa13.56□□□□□ -0.24
HLA-DRB9-201ENST00000449413 GLYCTKQ8IVS8 523 aa13.56□□□□□ -0.24
HLA-DRB9-201ENST00000449413 RPUSD2Q8IZ73 545 aaKnown RBP13.56□□□□□ -0.24
HLA-DRB9-201ENST00000449413 LRRC43Q8N309 656 aa13.56□□□□□ -0.24
HLA-DRB9-201ENST00000449413 HERVK_113Q902F9 699 aa13.56□□□□□ -0.24
HLA-DRB9-201ENST00000449413 DDX27Q96GQ7 796 aaKnown RBP13.56□□□□□ -0.24
HLA-DRB9-201ENST00000449413 CASD1Q96PB1 797 aa13.56□□□□□ -0.24
HLA-DRB9-201ENST00000449413 AGPAT1Q99943 283 aa13.56□□□□□ -0.24
HLA-DRB9-201ENST00000449413 PAAF1Q9BRP4 392 aa13.56□□□□□ -0.24
HLA-DRB9-201ENST00000449413 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.56□□□□□ -0.24
HLA-DRB9-201ENST00000449413 IL23AQ9NPF7 189 aa13.56□□□□□ -0.24
HLA-DRB9-201ENST00000449413 KANSL3Q9P2N6 904 aa13.56□□□□□ -0.24
HLA-DRB9-201ENST00000449413 BARX2Q9UMQ3 279 aaPredicted RBP13.56□□□□□ -0.24
HLA-DRB9-201ENST00000449413 L1RE1Q9UN81 338 aa13.56□□□□□ -0.24
HLA-DRB9-201ENST00000449413 PATJQ8NI35 1801 aa13.55□□□□□ -0.24
HLA-DRB9-201ENST00000449413 NLRC5Q86WI3 1866 aa13.55□□□□□ -0.24
HLA-DRB9-201ENST00000449413 GOLGA6L9A6NEM1 432 aa13.55□□□□□ -0.24
HLA-DRB9-201ENST00000449413 DDX3XO00571 662 aaKnown RBP eCLIP13.55□□□□□ -0.24
HLA-DRB9-201ENST00000449413 TACC1O75410 805 aa13.55□□□□□ -0.24
HLA-DRB9-201ENST00000449413 KIF4AO95239 1232 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms