RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 TMEM88BA6NKF7 163 aa17.11■□□□□ 0.33
AP000253.1-201ENST00000449339 KIF3CO14782 793 aa17.11■□□□□ 0.33
AP000253.1-201ENST00000449339 C6orf222P0C671 652 aaPredicted RBP17.11■□□□□ 0.33
AP000253.1-201ENST00000449339 TRIM32Q13049 653 aa17.11■□□□□ 0.33
AP000253.1-201ENST00000449339 MAMLD1Q13495 774 aa17.11■□□□□ 0.33
AP000253.1-201ENST00000449339 PPP1R2P3Q6NXS1 205 aa17.11■□□□□ 0.33
AP000253.1-201ENST00000449339 MMS22LQ6ZRQ5 1243 aa17.11■□□□□ 0.33
AP000253.1-201ENST00000449339 JAMLQ86YT9 394 aa17.11■□□□□ 0.33
AP000253.1-201ENST00000449339 LRRC45Q96CN5 670 aa17.11■□□□□ 0.33
AP000253.1-201ENST00000449339 EIF2AQ9BY44 585 aaKnown RBP17.11■□□□□ 0.33
AP000253.1-201ENST00000449339 MRPL47Q9HD33 250 aaKnown RBP17.11■□□□□ 0.33
AP000253.1-201ENST00000449339 MTUS1Q9ULD2 1270 aa17.11■□□□□ 0.33
AP000253.1-201ENST00000449339 AOC2O75106 756 aa17.1■□□□□ 0.33
AP000253.1-201ENST00000449339 AKR1A1P14550 325 aa17.1■□□□□ 0.33
AP000253.1-201ENST00000449339 BRD2P25440 801 aaKnown RBP17.1■□□□□ 0.33
AP000253.1-201ENST00000449339 PURAQ00577 322 aaKnown RBP17.1■□□□□ 0.33
AP000253.1-201ENST00000449339 C1QBPQ07021 282 aaKnown RBP17.1■□□□□ 0.33
AP000253.1-201ENST00000449339 DUPD1Q68J44 220 aa17.1■□□□□ 0.33
AP000253.1-201ENST00000449339 FAM76AQ8TAV0 307 aa17.1■□□□□ 0.33
AP000253.1-201ENST00000449339 CXorf38Q8TB03 319 aa17.1■□□□□ 0.33
AP000253.1-201ENST00000449339 TMEM40Q8WWA1 233 aa17.1■□□□□ 0.33
AP000253.1-201ENST00000449339 ACAP3Q96P50 834 aa17.1■□□□□ 0.33
AP000253.1-201ENST00000449339 ADPGKQ9BRR6 497 aa17.1■□□□□ 0.33
AP000253.1-201ENST00000449339 PCYOX1Q9UHG3 505 aa17.1■□□□□ 0.33
AP000253.1-201ENST00000449339 FLT3P36888 993 aa17.09■□□□□ 0.33
AP000253.1-201ENST00000449339 FLT3LGP49771 235 aa17.09■□□□□ 0.33
AP000253.1-201ENST00000449339 CDH8P55286 799 aa17.09■□□□□ 0.33
AP000253.1-201ENST00000449339 FCGRTP55899 365 aa17.09■□□□□ 0.33
AP000253.1-201ENST00000449339 PTP4A2Q12974 167 aa17.09■□□□□ 0.33
AP000253.1-201ENST00000449339 PLEKHA7Q6IQ23 1121 aa17.09■□□□□ 0.33
AP000253.1-201ENST00000449339 CCDC137Q6PK04 289 aaKnown RBP17.09■□□□□ 0.33
AP000253.1-201ENST00000449339 ARL8AQ96BM9 186 aa17.09■□□□□ 0.33
AP000253.1-201ENST00000449339 RNF19AQ9NV58 838 aa17.09■□□□□ 0.33
AP000253.1-201ENST00000449339 RASAL2Q9UJF2 1139 aa17.09■□□□□ 0.33
AP000253.1-201ENST00000449339 Q9Y3F1 56 aa17.09■□□□□ 0.33
AP000253.1-201ENST00000449339 HES2Q9Y543 173 aa17.09■□□□□ 0.33
AP000253.1-201ENST00000449339 PROSCO94903 275 aa17.09■□□□□ 0.33
AP000253.1-201ENST00000449339 PGK1P00558 417 aa17.09■□□□□ 0.33
AP000253.1-201ENST00000449339 RARAP10276 462 aa17.09■□□□□ 0.33
AP000253.1-201ENST00000449339 DARSP14868 501 aaKnown RBP17.09■□□□□ 0.33
AP000253.1-201ENST00000449339 CAPN2P17655 700 aa17.09■□□□□ 0.33
AP000253.1-201ENST00000449339 MMP8P22894 467 aa17.09■□□□□ 0.33
AP000253.1-201ENST00000449339 HSD17B3P37058 310 aa17.09■□□□□ 0.33
AP000253.1-201ENST00000449339 LACTBP83111 547 aaPredicted RBP17.09■□□□□ 0.33
AP000253.1-201ENST00000449339 ORC1Q13415 861 aa17.09■□□□□ 0.33
AP000253.1-201ENST00000449339 TMEM132DQ14C87 1099 aa17.09■□□□□ 0.33
AP000253.1-201ENST00000449339 CYP1B1Q16678 543 aa17.09■□□□□ 0.33
AP000253.1-201ENST00000449339 WDR72Q3MJ13 1102 aa17.09■□□□□ 0.33
AP000253.1-201ENST00000449339 TTC27Q6P3X3 843 aa17.09■□□□□ 0.33
AP000253.1-201ENST00000449339 SDCBP2Q9H190 292 aa17.09■□□□□ 0.33
AP000253.1-201ENST00000449339 SNTG2Q9NY99 539 aa17.09■□□□□ 0.33
AP000253.1-201ENST00000449339 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.09■□□□□ 0.33
AP000253.1-201ENST00000449339 SCINQ9Y6U3 715 aa17.09■□□□□ 0.33
AP000253.1-201ENST00000449339 CYBAP13498 195 aa17.08■□□□□ 0.33
AP000253.1-201ENST00000449339 POLR2BP30876 1174 aaKnown RBP17.08■□□□□ 0.33
AP000253.1-201ENST00000449339 PTGIRP43119 386 aa17.08■□□□□ 0.33
AP000253.1-201ENST00000449339 PRKCZQ05513 592 aa17.08■□□□□ 0.33
AP000253.1-201ENST00000449339 SIX1Q15475 284 aaPredicted RBP17.08■□□□□ 0.33
AP000253.1-201ENST00000449339 TTMPQ5BVD1 217 aa17.08■□□□□ 0.33
AP000253.1-201ENST00000449339 CD302Q8IX05 232 aa17.08■□□□□ 0.33
AP000253.1-201ENST00000449339 SMC1BQ8NDV3 1235 aa17.08■□□□□ 0.33
AP000253.1-201ENST00000449339 ASB7Q9H672 318 aa17.08■□□□□ 0.33
AP000253.1-201ENST00000449339 SMYD3Q9H7B4 428 aa17.08■□□□□ 0.33
AP000253.1-201ENST00000449339 PARVAQ9NVD7 372 aa17.08■□□□□ 0.33
AP000253.1-201ENST00000449339 C17orf102A2RUQ5 167 aa17.08■□□□□ 0.32
AP000253.1-201ENST00000449339 PODXLO00592 558 aa17.08■□□□□ 0.32
AP000253.1-201ENST00000449339 TLR3O15455 904 aaKnown RBP17.08■□□□□ 0.32
AP000253.1-201ENST00000449339 LLGL1Q15334 1064 aa17.08■□□□□ 0.32
AP000253.1-201ENST00000449339 ZNF667Q5HYK9 610 aa17.08■□□□□ 0.32
AP000253.1-201ENST00000449339 GNASQ5JWF2 1037 aa17.08■□□□□ 0.32
AP000253.1-201ENST00000449339 DAB2IPQ5VWQ8 1189 aa17.08■□□□□ 0.32
AP000253.1-201ENST00000449339 TMC3Q7Z5M5 1100 aa17.08■□□□□ 0.32
AP000253.1-201ENST00000449339 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.08■□□□□ 0.32
AP000253.1-201ENST00000449339 TFAP2BQ92481 460 aa17.08■□□□□ 0.32
AP000253.1-201ENST00000449339 FMO2Q99518 471 aa17.08■□□□□ 0.32
AP000253.1-201ENST00000449339 PLAAQ9Y263 795 aa17.08■□□□□ 0.32
AP000253.1-201ENST00000449339 DUSP11O75319 330 aaKnown RBP17.07■□□□□ 0.32
AP000253.1-201ENST00000449339 LSM8O95777 96 aaKnown RBP17.07■□□□□ 0.32
AP000253.1-201ENST00000449339 EIF4BP23588 611 aaKnown RBP17.07■□□□□ 0.32
AP000253.1-201ENST00000449339 GRM5P41594 1212 aa17.07■□□□□ 0.32
AP000253.1-201ENST00000449339 DRG2P55039 364 aaKnown RBP17.07■□□□□ 0.32
AP000253.1-201ENST00000449339 SNX17Q15036 470 aa17.07■□□□□ 0.32
AP000253.1-201ENST00000449339 UAP1Q16222 522 aaPredicted RBP17.07■□□□□ 0.32
AP000253.1-201ENST00000449339 CCDC105Q8IYK2 499 aa17.07■□□□□ 0.32
AP000253.1-201ENST00000449339 C7orf31Q8N865 590 aa17.07■□□□□ 0.32
AP000253.1-201ENST00000449339 KIF12Q96FN5 646 aa17.07■□□□□ 0.32
AP000253.1-201ENST00000449339 AGAP1Q9UPQ3 857 aa17.07■□□□□ 0.32
AP000253.1-201ENST00000449339 FSCN2O14926 492 aa17.06■□□□□ 0.32
AP000253.1-201ENST00000449339 GJB6O95452 261 aa17.06■□□□□ 0.32
AP000253.1-201ENST00000449339 COILP38432 576 aaPredicted RBP17.06■□□□□ 0.32
AP000253.1-201ENST00000449339 DCAF4L1Q3SXM0 396 aa17.06■□□□□ 0.32
AP000253.1-201ENST00000449339 CXCL17Q6UXB2 119 aa17.06■□□□□ 0.32
AP000253.1-201ENST00000449339 C12orf50Q8NA57 414 aaPredicted RBP17.06■□□□□ 0.32
AP000253.1-201ENST00000449339 C1orf131Q8NDD1 294 aaKnown RBP17.06■□□□□ 0.32
AP000253.1-201ENST00000449339 DDX27Q96GQ7 796 aaKnown RBP17.06■□□□□ 0.32
AP000253.1-201ENST00000449339 RUNDC3BQ96NL0 473 aa17.06■□□□□ 0.32
AP000253.1-201ENST00000449339 APOL6Q9BWW8 343 aa17.06■□□□□ 0.32
AP000253.1-201ENST00000449339 ZDHHC18Q9NUE0 388 aa17.06■□□□□ 0.32
AP000253.1-201ENST00000449339 DPP3Q9NY33 737 aa17.06■□□□□ 0.32
AP000253.1-201ENST00000449339 HMGXB4Q9UGU5 601 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms