RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 HDAC7Q8WUI4 952 aa15.71■□□□□ 0.11
USP39-206ENST00000448971 ERCC4Q92889 916 aaPredicted RBP15.71■□□□□ 0.11
USP39-206ENST00000448971 NXPE3Q969Y0 559 aa15.71■□□□□ 0.11
USP39-206ENST00000448971 FAM84AQ96KN4 292 aa15.71■□□□□ 0.11
USP39-206ENST00000448971 PLEKHA4Q9H4M7 779 aa15.71■□□□□ 0.11
USP39-206ENST00000448971 FBXW11Q9UKB1 542 aa15.71■□□□□ 0.11
USP39-206ENST00000448971 TIMM13Q9Y5L4 95 aaPredicted RBP15.71■□□□□ 0.11
USP39-206ENST00000448971 BACE2Q9Y5Z0 518 aa15.71■□□□□ 0.11
USP39-206ENST00000448971 CLUHO75153 1309 aa15.7■□□□□ 0.1
USP39-206ENST00000448971 ANO9A1A5B4 782 aa15.7■□□□□ 0.1
USP39-206ENST00000448971 M0QZQ0 153 aa15.7■□□□□ 0.1
USP39-206ENST00000448971 PIRO00625 290 aa15.7■□□□□ 0.1
USP39-206ENST00000448971 PDXKO00764 312 aa15.7■□□□□ 0.1
USP39-206ENST00000448971 ADAM12O43184 909 aa15.7■□□□□ 0.1
USP39-206ENST00000448971 CLSTN1O94985 981 aa15.7■□□□□ 0.1
USP39-206ENST00000448971 NR3C1P04150 777 aa15.7■□□□□ 0.1
USP39-206ENST00000448971 CPB1P15086 417 aa15.7■□□□□ 0.1
USP39-206ENST00000448971 TNNI1P19237 187 aa15.7■□□□□ 0.1
USP39-206ENST00000448971 GBP2P32456 591 aaPredicted RBP15.7■□□□□ 0.1
USP39-206ENST00000448971 PNPLA4P41247 253 aa15.7■□□□□ 0.1
USP39-206ENST00000448971 AARSP49588 968 aaKnown RBP eCLIP15.7■□□□□ 0.1
USP39-206ENST00000448971 LILRA4P59901 499 aa15.7■□□□□ 0.1
USP39-206ENST00000448971 UBE2HP62256 183 aa15.7■□□□□ 0.1
USP39-206ENST00000448971 ROR1Q01973 937 aa15.7■□□□□ 0.1
USP39-206ENST00000448971 CYP24A1Q07973 514 aa15.7■□□□□ 0.1
USP39-206ENST00000448971 LILRA6Q6PI73 481 aa15.7■□□□□ 0.1
USP39-206ENST00000448971 WDR49Q8IV35 697 aa15.7■□□□□ 0.1
USP39-206ENST00000448971 SMYD4Q8IYR2 804 aaPredicted RBP15.7■□□□□ 0.1
USP39-206ENST00000448971 C1orf127Q8N9H9 656 aa15.7■□□□□ 0.1
USP39-206ENST00000448971 SMG7Q92540 1137 aaKnown RBP15.7■□□□□ 0.1
USP39-206ENST00000448971 CCDC127Q96BQ5 260 aa15.7■□□□□ 0.1
USP39-206ENST00000448971 SENP8Q96LD8 212 aa15.7■□□□□ 0.1
USP39-206ENST00000448971 CGRRF1Q99675 332 aa15.7■□□□□ 0.1
USP39-206ENST00000448971 KCTD10Q9H3F6 313 aa15.7■□□□□ 0.1
USP39-206ENST00000448971 SEMA4AQ9H3S1 761 aa15.7■□□□□ 0.1
USP39-206ENST00000448971 DLGAP2Q9P1A6 1054 aa15.7■□□□□ 0.1
USP39-206ENST00000448971 ITGA11Q9UKX5 1188 aa15.7■□□□□ 0.1
USP39-206ENST00000448971 FANCMQ8IYD8 2048 aa15.7■□□□□ 0.1
USP39-206ENST00000448971 PTPRJQ12913 1337 aa15.69■□□□□ 0.1
USP39-206ENST00000448971 TSC2P49815 1807 aa15.69■□□□□ 0.1
USP39-206ENST00000448971 ANHXE9PGG2 379 aa15.69■□□□□ 0.1
USP39-206ENST00000448971 SPTLC1O15269 473 aa15.69■□□□□ 0.1
USP39-206ENST00000448971 PRPF40AO75400 957 aaKnown RBP15.69■□□□□ 0.1
USP39-206ENST00000448971 C8AP07357 584 aa15.69■□□□□ 0.1
USP39-206ENST00000448971 SRFP11831 508 aa15.69■□□□□ 0.1
USP39-206ENST00000448971 LAMP2P13473 410 aa15.69■□□□□ 0.1
USP39-206ENST00000448971 PAX3P23760 479 aa15.69■□□□□ 0.1
USP39-206ENST00000448971 BFSP1Q12934 665 aa15.69■□□□□ 0.1
USP39-206ENST00000448971 RAB33AQ14088 237 aa15.69■□□□□ 0.1
USP39-206ENST00000448971 PSMD6Q15008 389 aa15.69■□□□□ 0.1
USP39-206ENST00000448971 CEP135Q66GS9 1140 aa15.69■□□□□ 0.1
USP39-206ENST00000448971 OVOS1Q6IE37 1185 aa15.69■□□□□ 0.1
USP39-206ENST00000448971 GUF1Q8N442 669 aaKnown RBP15.69■□□□□ 0.1
USP39-206ENST00000448971 CSGALNACT2Q8N6G5 542 aa15.69■□□□□ 0.1
USP39-206ENST00000448971 GSDMAQ96QA5 445 aa15.69■□□□□ 0.1
USP39-206ENST00000448971 PIDD1Q9HB75 910 aa15.69■□□□□ 0.1
USP39-206ENST00000448971 INTS13Q9NVM9 706 aa15.69■□□□□ 0.1
USP39-206ENST00000448971 FBXL5Q9UKA1 691 aa15.69■□□□□ 0.1
USP39-206ENST00000448971 AGAP1Q9UPQ3 857 aa15.69■□□□□ 0.1
USP39-206ENST00000448971 PCDHA5Q9Y5H7 936 aa15.69■□□□□ 0.1
USP39-206ENST00000448971 NCOR2Q9Y618 2525 aa15.69■□□□□ 0.1
USP39-206ENST00000448971 LMNAP02545 664 aaKnown RBP15.68■□□□□ 0.1
USP39-206ENST00000448971 TYMPP19971 482 aa15.68■□□□□ 0.1
USP39-206ENST00000448971 NR2F2P24468 414 aa15.68■□□□□ 0.1
USP39-206ENST00000448971 PPM1LQ5SGD2 360 aa15.68■□□□□ 0.1
USP39-206ENST00000448971 SLC8B1Q6J4K2 584 aa15.68■□□□□ 0.1
USP39-206ENST00000448971 PHLDB3Q6NSJ2 640 aa15.68■□□□□ 0.1
USP39-206ENST00000448971 RSPO2Q6UXX9 243 aaPredicted RBP15.68■□□□□ 0.1
USP39-206ENST00000448971 METTL23Q86XA0 190 aa15.68■□□□□ 0.1
USP39-206ENST00000448971 OR5B17Q8NGF7 314 aa15.68■□□□□ 0.1
USP39-206ENST00000448971 SLC7A14Q8TBB6 771 aa15.68■□□□□ 0.1
USP39-206ENST00000448971 GPR152Q8TDT2 470 aa15.68■□□□□ 0.1
USP39-206ENST00000448971 IPO9Q96P70 1041 aaKnown RBP15.68■□□□□ 0.1
USP39-206ENST00000448971 PRKD2Q9BZL6 878 aa15.68■□□□□ 0.1
USP39-206ENST00000448971 TBC1D17Q9HA65 648 aa15.68■□□□□ 0.1
USP39-206ENST00000448971 ZDHHC7Q9NXF8 308 aa15.68■□□□□ 0.1
USP39-206ENST00000448971 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.68■□□□□ 0.1
USP39-206ENST00000448971 DSEQ9UL01 958 aa15.68■□□□□ 0.1
USP39-206ENST00000448971 CA14Q9ULX7 337 aa15.68■□□□□ 0.1
USP39-206ENST00000448971 TRAF3IP3Q9Y228 551 aa15.68■□□□□ 0.1
USP39-206ENST00000448971 FRMD4BQ9Y2L6 1034 aa15.68■□□□□ 0.1
USP39-206ENST00000448971 TPRP12270 2363 aaKnown RBP15.68■□□□□ 0.1
USP39-206ENST00000448971 WDR27A2RRH5 827 aa15.67■□□□□ 0.1
USP39-206ENST00000448971 KPNA7A9QM74 516 aa15.67■□□□□ 0.1
USP39-206ENST00000448971 CYB561D2O14569 222 aa15.67■□□□□ 0.1
USP39-206ENST00000448971 ZMYND10O75800 440 aa15.67■□□□□ 0.1
USP39-206ENST00000448971 ELF1P32519 619 aa15.67■□□□□ 0.1
USP39-206ENST00000448971 RBP5P82980 135 aa15.67■□□□□ 0.1
USP39-206ENST00000448971 MRPL58Q14197 206 aaKnown RBP15.67■□□□□ 0.1
USP39-206ENST00000448971 DUOXA2Q1HG44 320 aa15.67■□□□□ 0.1
USP39-206ENST00000448971 ZNF658Q5TYW1 1059 aaPredicted RBP15.67■□□□□ 0.1
USP39-206ENST00000448971 SLC9A9Q8IVB4 645 aa15.67■□□□□ 0.1
USP39-206ENST00000448971 LRRC52Q8N7C0 313 aa15.67■□□□□ 0.1
USP39-206ENST00000448971 SLC2A4RGQ9NR83 387 aa15.67■□□□□ 0.1
USP39-206ENST00000448971 POLIQ9UNA4 740 aa15.67■□□□□ 0.1
USP39-206ENST00000448971 R4GN57 208 aa15.67■□□□□ 0.1
USP39-206ENST00000448971 SPTBN2O15020 2390 aa15.67■□□□□ 0.1
USP39-206ENST00000448971 OR6C75A6NL08 312 aa15.66■□□□□ 0.1
USP39-206ENST00000448971 PRRG1O14668 218 aa15.66■□□□□ 0.1
USP39-206ENST00000448971 DCNP07585 359 aaKnown RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms