RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 TIPINQ9BVW5 301 aa19.57■□□□□ 0.72
CHCHD3-203ENST00000448878 SMG9Q9H0W8 520 aaKnown RBP19.57■□□□□ 0.72
CHCHD3-203ENST00000448878 TASP1Q9H6P5 420 aa19.57■□□□□ 0.72
CHCHD3-203ENST00000448878 GKN1Q9NS71 199 aa19.57■□□□□ 0.72
CHCHD3-203ENST00000448878 RXFP3Q9NSD7 469 aa19.57■□□□□ 0.72
CHCHD3-203ENST00000448878 OBP2AQ9NY56 170 aa19.57■□□□□ 0.72
CHCHD3-203ENST00000448878 PCDHB6Q9Y5E3 794 aa19.57■□□□□ 0.72
CHCHD3-203ENST00000448878 TTC26A0AVF1 554 aa19.56■□□□□ 0.72
CHCHD3-203ENST00000448878 PRAMEF12O95522 483 aa19.56■□□□□ 0.72
CHCHD3-203ENST00000448878 MAPTP10636 758 aaKnown RBP19.56■□□□□ 0.72
CHCHD3-203ENST00000448878 ODC1P11926 461 aa19.56■□□□□ 0.72
CHCHD3-203ENST00000448878 CYP3A5P20815 502 aa19.56■□□□□ 0.72
CHCHD3-203ENST00000448878 GRSF1Q12849 480 aaKnown RBP eCLIP19.56■□□□□ 0.72
CHCHD3-203ENST00000448878 STPG1Q5TH74 334 aa19.56■□□□□ 0.72
CHCHD3-203ENST00000448878 PKN3Q6P5Z2 889 aa19.56■□□□□ 0.72
CHCHD3-203ENST00000448878 DTHD1Q6ZMT9 781 aa19.56■□□□□ 0.72
CHCHD3-203ENST00000448878 FBXO18Q8NFZ0 1043 aa19.56■□□□□ 0.72
CHCHD3-203ENST00000448878 GIPC2Q8TF65 315 aa19.56■□□□□ 0.72
CHCHD3-203ENST00000448878 SPIRE2Q8WWL2 714 aa19.56■□□□□ 0.72
CHCHD3-203ENST00000448878 SMOC1Q9H4F8 434 aa19.56■□□□□ 0.72
CHCHD3-203ENST00000448878 RPF1Q9H9Y2 349 aaKnown RBP19.56■□□□□ 0.72
CHCHD3-203ENST00000448878 TULP1O00294 542 aaPredicted RBP19.55■□□□□ 0.72
CHCHD3-203ENST00000448878 ATG13O75143 517 aa19.55■□□□□ 0.72
CHCHD3-203ENST00000448878 GUCY2CP25092 1073 aa19.55■□□□□ 0.72
CHCHD3-203ENST00000448878 HOXA6P31267 233 aa19.55■□□□□ 0.72
CHCHD3-203ENST00000448878 TUFMP49411 452 aaKnown RBP19.55■□□□□ 0.72
CHCHD3-203ENST00000448878 MCM2P49736 904 aa19.55■□□□□ 0.72
CHCHD3-203ENST00000448878 LIG4P49917 911 aa19.55■□□□□ 0.72
CHCHD3-203ENST00000448878 CACNB1Q02641 598 aaPredicted RBP19.55■□□□□ 0.72
CHCHD3-203ENST00000448878 ZBTB6Q15916 424 aa19.55■□□□□ 0.72
CHCHD3-203ENST00000448878 SLC39A12Q504Y0 691 aa19.55■□□□□ 0.72
CHCHD3-203ENST00000448878 LOXL4Q96JB6 756 aa19.55■□□□□ 0.72
CHCHD3-203ENST00000448878 SENP8Q96LD8 212 aa19.55■□□□□ 0.72
CHCHD3-203ENST00000448878 HAPLN2Q9GZV7 340 aa19.55■□□□□ 0.72
CHCHD3-203ENST00000448878 LIMCH1Q9UPQ0 1083 aa19.55■□□□□ 0.72
CHCHD3-203ENST00000448878 PPEF2O14830 753 aa19.54■□□□□ 0.72
CHCHD3-203ENST00000448878 EPN2O95208 641 aa19.54■□□□□ 0.72
CHCHD3-203ENST00000448878 TYMPP19971 482 aa19.54■□□□□ 0.72
CHCHD3-203ENST00000448878 CDC25CP30307 473 aa19.54■□□□□ 0.72
CHCHD3-203ENST00000448878 AARSP49588 968 aaKnown RBP eCLIP19.54■□□□□ 0.724e-6■■■■■ 30.7
CHCHD3-203ENST00000448878 LIMK1P53667 647 aa19.54■□□□□ 0.72
CHCHD3-203ENST00000448878 CDK5RAP3Q96JB5 506 aa19.54■□□□□ 0.72
CHCHD3-203ENST00000448878 RALYQ9UKM9 306 aaKnown RBP19.54■□□□□ 0.72
CHCHD3-203ENST00000448878 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.54■□□□□ 0.72
CHCHD3-203ENST00000448878 KIF26AQ9ULI4 1882 aaPredicted RBP19.54■□□□□ 0.72
CHCHD3-203ENST00000448878 NPHP3-ACAD11A0A0J9YXS1 232 aa19.53■□□□□ 0.72
CHCHD3-203ENST00000448878 PMLP29590 882 aa19.53■□□□□ 0.72
CHCHD3-203ENST00000448878 AVPR1AP37288 418 aa19.53■□□□□ 0.72
CHCHD3-203ENST00000448878 LILRA4P59901 499 aa19.53■□□□□ 0.72
CHCHD3-203ENST00000448878 BFSP1Q12934 665 aa19.53■□□□□ 0.72
CHCHD3-203ENST00000448878 RUNX3Q13761 415 aa19.53■□□□□ 0.72
CHCHD3-203ENST00000448878 IL17AQ16552 155 aa19.53■□□□□ 0.72
CHCHD3-203ENST00000448878 TRIM68Q6AZZ1 485 aa19.53■□□□□ 0.72
CHCHD3-203ENST00000448878 METTL23Q86XA0 190 aa19.53■□□□□ 0.72
CHCHD3-203ENST00000448878 TTC16Q8NEE8 873 aa19.53■□□□□ 0.72
CHCHD3-203ENST00000448878 LLPHQ9BRT6 129 aaKnown RBP19.53■□□□□ 0.72
CHCHD3-203ENST00000448878 MMTAG2Q9BU76 263 aaKnown RBP19.53■□□□□ 0.72
CHCHD3-203ENST00000448878 SLC46A2Q9BY10 475 aa19.53■□□□□ 0.72
CHCHD3-203ENST00000448878 EBF3Q9H4W6 596 aa19.53■□□□□ 0.72
CHCHD3-203ENST00000448878 LARSQ9P2J5 1176 aaKnown RBP19.53■□□□□ 0.72
CHCHD3-203ENST00000448878 H0YCG3 227 aa19.52■□□□□ 0.72
CHCHD3-203ENST00000448878 LAD1O00515 517 aa19.52■□□□□ 0.72
CHCHD3-203ENST00000448878 HNRNPDLO14979 420 aaKnown RBP19.52■□□□□ 0.72
CHCHD3-203ENST00000448878 MPLP40238 635 aa19.52■□□□□ 0.72
CHCHD3-203ENST00000448878 RAP1GAPP47736 663 aa19.52■□□□□ 0.72
CHCHD3-203ENST00000448878 TOB1P50616 345 aaPredicted RBP19.52■□□□□ 0.72
CHCHD3-203ENST00000448878 HMGN5P82970 282 aaKnown RBP19.52■□□□□ 0.72
CHCHD3-203ENST00000448878 ENOX2Q16206 610 aaKnown RBP19.52■□□□□ 0.72
CHCHD3-203ENST00000448878 KYAT1Q16773 422 aa19.52■□□□□ 0.72
CHCHD3-203ENST00000448878 SPATA1Q5VX52 437 aa19.52■□□□□ 0.72
CHCHD3-203ENST00000448878 RNF43Q68DV7 783 aa19.52■□□□□ 0.72
CHCHD3-203ENST00000448878 JADE1Q6IE81 842 aa19.52■□□□□ 0.72
CHCHD3-203ENST00000448878 CC2D1AQ6P1N0 951 aaPredicted RBP19.52■□□□□ 0.72
CHCHD3-203ENST00000448878 CMTM8Q8IZV2 173 aa19.52■□□□□ 0.72
CHCHD3-203ENST00000448878 THEM5Q8N1Q8 247 aa19.52■□□□□ 0.72
CHCHD3-203ENST00000448878 MAB21L3Q8N8X9 362 aa19.52■□□□□ 0.72
CHCHD3-203ENST00000448878 SYT2Q8N9I0 419 aaPredicted RBP19.52■□□□□ 0.72
CHCHD3-203ENST00000448878 OR10T2Q8NGX3 314 aa19.52■□□□□ 0.72
CHCHD3-203ENST00000448878 POLR3BQ9NW08 1133 aaPredicted RBP19.52■□□□□ 0.72
CHCHD3-203ENST00000448878 NUP210Q8TEM1 1887 aaPredicted RBP19.52■□□□□ 0.71
CHCHD3-203ENST00000448878 TM4SF5O14894 197 aa19.51■□□□□ 0.71
CHCHD3-203ENST00000448878 OGTO15294 1046 aa19.51■□□□□ 0.71
CHCHD3-203ENST00000448878 RNF40O75150 1001 aa19.51■□□□□ 0.71
CHCHD3-203ENST00000448878 ATF6P18850 670 aa19.51■□□□□ 0.71
CHCHD3-203ENST00000448878 AMPD2Q01433 879 aa19.51■□□□□ 0.71
CHCHD3-203ENST00000448878 FSTL4Q6MZW2 842 aa19.51■□□□□ 0.71
CHCHD3-203ENST00000448878 HHIPQ96QV1 700 aa19.51■□□□□ 0.71
CHCHD3-203ENST00000448878 MSTO1Q9BUK6 570 aa19.51■□□□□ 0.71
CHCHD3-203ENST00000448878 ABI2Q9NYB9 513 aaPredicted RBP19.51■□□□□ 0.71
CHCHD3-203ENST00000448878 HSFX1Q9UBD0 423 aa19.51■□□□□ 0.71
CHCHD3-203ENST00000448878 GREB1Q4ZG55 1949 aa19.51■□□□□ 0.71
CHCHD3-203ENST00000448878 MAP1BP46821 2468 aaKnown RBP19.5■□□□□ 0.71
CHCHD3-203ENST00000448878 MYH11P35749 1972 aa19.5■□□□□ 0.71
CHCHD3-203ENST00000448878 CCDC163A0A0D9SF12 145 aa19.5■□□□□ 0.71
CHCHD3-203ENST00000448878 KCNK5O95279 499 aa19.5■□□□□ 0.71
CHCHD3-203ENST00000448878 EGFP01133 1207 aa19.5■□□□□ 0.71
CHCHD3-203ENST00000448878 PLA2G4BP0C869 781 aa19.5■□□□□ 0.71
CHCHD3-203ENST00000448878 WEE1P30291 646 aa19.5■□□□□ 0.71
CHCHD3-203ENST00000448878 NMT1P30419 496 aaKnown RBP19.5■□□□□ 0.71
CHCHD3-203ENST00000448878 PRPHP41219 470 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms