RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 KDELC2Q7Z4H8 507 aa8.13□□□□□ -1.11
NEDD9-204ENST00000448183 P3H2Q8IVL5 708 aa8.13□□□□□ -1.11
NEDD9-204ENST00000448183 SHCBP1Q8NEM2 672 aa8.13□□□□□ -1.11
NEDD9-204ENST00000448183 SH3TC2Q8TF17 1288 aa8.13□□□□□ -1.11
NEDD9-204ENST00000448183 SH3KBP1Q96B97 665 aa8.13□□□□□ -1.11
NEDD9-204ENST00000448183 HIST1H2AHQ96KK5 128 aa8.13□□□□□ -1.11
NEDD9-204ENST00000448183 CNDP1Q96KN2 507 aa8.13□□□□□ -1.11
NEDD9-204ENST00000448183 MED15Q96RN5 788 aa8.13□□□□□ -1.11
NEDD9-204ENST00000448183 HIST1H2AJQ99878 128 aa8.13□□□□□ -1.11
NEDD9-204ENST00000448183 ZSWIM1Q9BR11 485 aa8.13□□□□□ -1.11
NEDD9-204ENST00000448183 H2AFJQ9BTM1 129 aa8.13□□□□□ -1.11
NEDD9-204ENST00000448183 PLA2G12BQ9BX93 195 aa8.13□□□□□ -1.11
NEDD9-204ENST00000448183 EXOSC4Q9NPD3 245 aaKnown RBP8.13□□□□□ -1.11
NEDD9-204ENST00000448183 HEY2Q9UBP5 337 aa8.13□□□□□ -1.11
NEDD9-204ENST00000448183 SNX9Q9Y5X1 595 aa8.13□□□□□ -1.11
NEDD9-204ENST00000448183 A2ML1A8K2U0 1454 aa8.13□□□□□ -1.11
NEDD9-204ENST00000448183 A0A087X0T9 212 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 O00370 1275 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 ECE2O60344 883 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 SERPINI2O75830 405 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 KRT75O95678 551 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 ALBP02768 609 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 FAM228BP0C875 321 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 RARGP13631 454 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 FXR2P51116 673 aaKnown RBP eCLIP8.12□□□□□ -1.119e-8■■□□□ 11.8
NEDD9-204ENST00000448183 BLVRAP53004 296 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 PLOD1Q02809 727 aaPredicted RBP8.12□□□□□ -1.11
NEDD9-204ENST00000448183 STX5Q13190 355 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 DCAF4L1Q3SXM0 396 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 SPDYAQ5MJ70 313 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 ELMSAN1Q6PJG2 1045 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 FEZF2Q8TBJ5 459 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 SH2D3AQ9BRG2 576 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 DCLRE1BQ9H816 532 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 TMBIM4Q9HC24 238 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 TJP2Q9UDY2 1190 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 COPG1Q9Y678 874 aaKnown RBP8.12□□□□□ -1.11
NEDD9-204ENST00000448183 PNPLA6Q8IY17 1366 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 CCDC78A2IDD5 438 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 MYO1GB0I1T2 1018 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 FKBP9O95302 570 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 UBE3AQ05086 875 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 ADRM1Q16186 407 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 ZC2HC1CQ53FD0 456 aaPredicted RBP8.12□□□□□ -1.11
NEDD9-204ENST00000448183 FIGNQ5HY92 759 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 MROH9Q5TGP6 573 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 FKBP9P1Q75LS8 142 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 EFL1Q7Z2Z2 1120 aaKnown RBP8.12□□□□□ -1.11
NEDD9-204ENST00000448183 LRRC6Q86X45 466 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 ZNF512BQ96KM6 892 aaPredicted RBP8.12□□□□□ -1.11
NEDD9-204ENST00000448183 PPP1R2P1Q96PQ5 205 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 POLIQ9UNA4 740 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 FARP1Q9Y4F1 1045 aaPredicted RBP8.12□□□□□ -1.11
NEDD9-204ENST00000448183 CNTNAP5Q8WYK1 1306 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 RSPH10B2B2RC85 870 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 NBPF26B4DH59 902 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 C21orf2O43822 256 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 NDUFS3O75489 264 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 DGKIO75912 1065 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 PLEKP08567 350 aaPredicted RBP8.12□□□□□ -1.11
NEDD9-204ENST00000448183 RSPH10BP0C881 870 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 STIP1P31948 543 aaKnown RBP8.12□□□□□ -1.11
NEDD9-204ENST00000448183 NUP107P57740 925 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 KCNK10P57789 538 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 GRIN1Q05586 938 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 OVGP1Q12889 678 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 MTM1Q13496 603 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 ATPAF2Q8N5M1 289 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 NBPF15Q8N660 670 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 MAGEB18Q96M61 343 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 FAM111AQ96PZ2 611 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 QTRT2Q9H974 415 aaKnown RBP8.12□□□□□ -1.11
NEDD9-204ENST00000448183 AP4S1Q9Y587 144 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 TRPC5OSA6NMA1 111 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 C5orf58C9J3I9 102 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 CSPG5O95196 566 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 KCNV1Q6PIU1 500 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 DDHD1Q8NEL9 900 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 URGCPQ8TCY9 931 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 EPS8L3Q8TE67 593 aaKnown RBP8.12□□□□□ -1.11
NEDD9-204ENST00000448183 ARHGEF1Q92888 912 aaKnown RBP8.12□□□□□ -1.11
NEDD9-204ENST00000448183 ZNF669Q96BR6 464 aaPredicted RBP8.12□□□□□ -1.11
NEDD9-204ENST00000448183 MAP3K14Q99558 947 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 RIC8BQ9NVN3 520 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 HAO1Q9UJM8 370 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 CAPN6Q9Y6Q1 641 aa8.12□□□□□ -1.11
NEDD9-204ENST00000448183 ARHGEF40Q8TER5 1519 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 A0A1B0GW55 424 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 MTSS1O43312 755 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 APOA4P06727 396 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 DUX4L2P0CJ85 424 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 DUX4L3P0CJ86 424 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 DUX4L4P0CJ87 422 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 DUX4L5P0CJ88 424 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 DUX4L6P0CJ89 424 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 DUX4L7P0CJ90 424 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 NUDT2P50583 147 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 MTFR1Q15390 333 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 KIZQ2M2Z5 673 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 TRIM16LQ309B1 348 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms