RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 NCOA4Q13772 614 aa12.8□□□□□ -0.36
RFC4-208ENST00000447345 ZNF699Q32M78 642 aa12.8□□□□□ -0.36
RFC4-208ENST00000447345 DPCR1Q3MIW9 517 aa12.8□□□□□ -0.36
RFC4-208ENST00000447345 CCDC40Q4G0X9 1142 aa12.8□□□□□ -0.36
RFC4-208ENST00000447345 TTI2Q6NXR4 508 aa12.8□□□□□ -0.36
RFC4-208ENST00000447345 RNF19BQ6ZMZ0 732 aa12.8□□□□□ -0.36
RFC4-208ENST00000447345 OSTM1Q86WC4 334 aa12.8□□□□□ -0.36
RFC4-208ENST00000447345 ADGRF2Q8IZF7 708 aa12.8□□□□□ -0.36
RFC4-208ENST00000447345 THEM5Q8N1Q8 247 aa12.8□□□□□ -0.36
RFC4-208ENST00000447345 SUSD6Q92537 303 aa12.8□□□□□ -0.36
RFC4-208ENST00000447345 SMG7Q92540 1137 aaKnown RBP12.8□□□□□ -0.36
RFC4-208ENST00000447345 DUSP9Q99956 384 aaKnown RBP12.8□□□□□ -0.36
RFC4-208ENST00000447345 RTP3Q9BQQ7 232 aa12.8□□□□□ -0.36
RFC4-208ENST00000447345 MKNK1Q9BUB5 465 aa12.8□□□□□ -0.36
RFC4-208ENST00000447345 COL25A1Q9BXS0 654 aaPredicted RBP12.8□□□□□ -0.36
RFC4-208ENST00000447345 PLEKHA4Q9H4M7 779 aa12.8□□□□□ -0.36
RFC4-208ENST00000447345 POMKQ9H5K3 350 aa12.8□□□□□ -0.36
RFC4-208ENST00000447345 CYP4F11Q9HBI6 524 aa12.8□□□□□ -0.36
RFC4-208ENST00000447345 NXF1Q9UBU9 619 aaKnown RBP12.8□□□□□ -0.36
RFC4-208ENST00000447345 CUL9Q8IWT3 2517 aa12.79□□□□□ -0.36
RFC4-208ENST00000447345 BICDL2A1A5D9 508 aa12.79□□□□□ -0.36
RFC4-208ENST00000447345 SEC24AO95486 1093 aa12.79□□□□□ -0.36
RFC4-208ENST00000447345 MBD3O95983 291 aa12.79□□□□□ -0.36
RFC4-208ENST00000447345 C4BPAP04003 597 aaKnown RBP12.79□□□□□ -0.36
RFC4-208ENST00000447345 SSTR3P32745 418 aaPredicted RBP12.79□□□□□ -0.36
RFC4-208ENST00000447345 MTHFRP42898 656 aa12.79□□□□□ -0.36
RFC4-208ENST00000447345 RAP1GAPP47736 663 aa12.79□□□□□ -0.36
RFC4-208ENST00000447345 AP3M2P53677 418 aa12.79□□□□□ -0.36
RFC4-208ENST00000447345 ADCY1Q08828 1119 aa12.79□□□□□ -0.36
RFC4-208ENST00000447345 SOWAHAQ2M3V2 549 aa12.79□□□□□ -0.36
RFC4-208ENST00000447345 WDR72Q3MJ13 1102 aa12.79□□□□□ -0.36
RFC4-208ENST00000447345 ZACNQ401N2 412 aa12.79□□□□□ -0.36
RFC4-208ENST00000447345 SLC39A12Q504Y0 691 aa12.79□□□□□ -0.36
RFC4-208ENST00000447345 ATAT1Q5SQI0 421 aa12.79□□□□□ -0.36
RFC4-208ENST00000447345 SV2AQ7L0J3 742 aa12.79□□□□□ -0.36
RFC4-208ENST00000447345 GPR149Q86SP6 731 aa12.79□□□□□ -0.36
RFC4-208ENST00000447345 ZC3H3Q8IXZ2 948 aaKnown RBP12.79□□□□□ -0.36
RFC4-208ENST00000447345 TOP6BLQ8N6T0 577 aa12.79□□□□□ -0.36
RFC4-208ENST00000447345 ZNF461Q8TAF7 563 aa12.79□□□□□ -0.36
RFC4-208ENST00000447345 HDAC7Q8WUI4 952 aa12.79□□□□□ -0.36
RFC4-208ENST00000447345 SYAP1Q96A49 352 aaPredicted RBP12.79□□□□□ -0.36
RFC4-208ENST00000447345 ZNF707Q96C28 371 aaPredicted RBP12.79□□□□□ -0.36
RFC4-208ENST00000447345 RPGRIP1Q96KN7 1286 aa12.79□□□□□ -0.36
RFC4-208ENST00000447345 RIPOR3Q96MK2 946 aa12.79□□□□□ -0.36
RFC4-208ENST00000447345 PI4K2AQ9BTU6 479 aa12.79□□□□□ -0.36
RFC4-208ENST00000447345 ZDHHC7Q9NXF8 308 aa12.79□□□□□ -0.36
RFC4-208ENST00000447345 GDAP2Q9NXN4 497 aa12.79□□□□□ -0.36
RFC4-208ENST00000447345 DDX43Q9NXZ2 648 aaKnown RBP12.79□□□□□ -0.36
RFC4-208ENST00000447345 GREB1Q4ZG55 1949 aa12.78□□□□□ -0.36
RFC4-208ENST00000447345 DENND4CQ5VZ89 1909 aa12.78□□□□□ -0.36
RFC4-208ENST00000447345 MYO10Q9HD67 2058 aa12.78□□□□□ -0.36
RFC4-208ENST00000447345 MTMR11A4FU01 709 aa12.78□□□□□ -0.36
RFC4-208ENST00000447345 ABLIM3O94929 683 aa12.78□□□□□ -0.36
RFC4-208ENST00000447345 HLA-DRAP01903 254 aa12.78□□□□□ -0.36
RFC4-208ENST00000447345 LRG1P02750 347 aa12.78□□□□□ -0.36
RFC4-208ENST00000447345 ATF2P15336 505 aa12.78□□□□□ -0.36
RFC4-208ENST00000447345 MXI1P50539 228 aa12.78□□□□□ -0.36
RFC4-208ENST00000447345 PSMC1P62191 440 aaKnown RBP12.78□□□□□ -0.36
RFC4-208ENST00000447345 NTHL1P78549 312 aa12.78□□□□□ -0.36
RFC4-208ENST00000447345 MYL7Q01449 175 aa12.78□□□□□ -0.36
RFC4-208ENST00000447345 ZP2Q05996 745 aa12.78□□□□□ -0.36
RFC4-208ENST00000447345 CCDC142Q17RM4 750 aa12.78□□□□□ -0.36
RFC4-208ENST00000447345 TPGS2Q68CL5 300 aa12.78□□□□□ -0.36
RFC4-208ENST00000447345 SPOPLQ6IQ16 392 aa12.78□□□□□ -0.36
RFC4-208ENST00000447345 C15orf39Q6ZRI6 1047 aa12.78□□□□□ -0.36
RFC4-208ENST00000447345 CCDC149Q6ZUS6 474 aa12.78□□□□□ -0.36
RFC4-208ENST00000447345 TMEM86AQ8N2M4 240 aa12.78□□□□□ -0.36
RFC4-208ENST00000447345 TTC9BQ8N6N2 239 aa12.78□□□□□ -0.36
RFC4-208ENST00000447345 TAS1R2Q8TE23 839 aa12.78□□□□□ -0.36
RFC4-208ENST00000447345 KBTBD7Q8WVZ9 684 aa12.78□□□□□ -0.36
RFC4-208ENST00000447345 MRPL45Q9BRJ2 306 aaKnown RBP12.78□□□□□ -0.36
RFC4-208ENST00000447345 OXCT2Q9BYC2 517 aaPredicted RBP12.78□□□□□ -0.36
RFC4-208ENST00000447345 PRKD2Q9BZL6 878 aa12.78□□□□□ -0.36
RFC4-208ENST00000447345 ZCWPW1Q9H0M4 648 aa12.78□□□□□ -0.36
RFC4-208ENST00000447345 XYLT2Q9H1B5 865 aa12.78□□□□□ -0.36
RFC4-208ENST00000447345 CRISPLD1Q9H336 500 aa12.78□□□□□ -0.36
RFC4-208ENST00000447345 SMYD3Q9H7B4 428 aa12.78□□□□□ -0.36
RFC4-208ENST00000447345 ABI2Q9NYB9 513 aaPredicted RBP12.78□□□□□ -0.36
RFC4-208ENST00000447345 ARMCX3Q9UH62 379 aaPredicted RBP12.78□□□□□ -0.36
RFC4-208ENST00000447345 AFF4Q9UHB7 1163 aaKnown RBP12.78□□□□□ -0.36
RFC4-208ENST00000447345 INSL5Q9Y5Q6 135 aa12.78□□□□□ -0.36
RFC4-208ENST00000447345 MYO16Q9Y6X6 1858 aa12.78□□□□□ -0.36
RFC4-208ENST00000447345 ZNF638Q14966 1978 aaKnown RBP12.78□□□□□ -0.36
RFC4-208ENST00000447345 IKBKBO14920 756 aa12.77□□□□□ -0.37
RFC4-208ENST00000447345 SOAT2O75908 522 aa12.77□□□□□ -0.37
RFC4-208ENST00000447345 VNN2O95498 520 aa12.77□□□□□ -0.37
RFC4-208ENST00000447345 C1RP00736 705 aa12.77□□□□□ -0.37
RFC4-208ENST00000447345 ATICP31939 592 aa12.77□□□□□ -0.37
RFC4-208ENST00000447345 NLRP12P59046 1061 aa12.77□□□□□ -0.37
RFC4-208ENST00000447345 TSPY1Q01534 308 aa12.77□□□□□ -0.37
RFC4-208ENST00000447345 TWF1Q12792 350 aa12.77□□□□□ -0.37
RFC4-208ENST00000447345 DUSP4Q13115 394 aa12.77□□□□□ -0.37
RFC4-208ENST00000447345 GPR17Q13304 367 aa12.77□□□□□ -0.37
RFC4-208ENST00000447345 ZNF667Q5HYK9 610 aa12.77□□□□□ -0.37
RFC4-208ENST00000447345 GET4Q7L5D6 327 aaPredicted RBP12.77□□□□□ -0.37
RFC4-208ENST00000447345 GRASPQ7Z6J2 395 aaPredicted RBP12.77□□□□□ -0.37
RFC4-208ENST00000447345 CREBRFQ8IUR6 639 aa12.77□□□□□ -0.37
RFC4-208ENST00000447345 ADHFE1Q8IWW8 467 aa12.77□□□□□ -0.37
RFC4-208ENST00000447345 ATAD1Q8NBU5 361 aa12.77□□□□□ -0.37
RFC4-208ENST00000447345 CMASQ8NFW8 434 aaPredicted RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms