RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 GABRR2P28476 465 aa16.7■□□□□ 0.26
SEC13-213ENST00000445064 PTPAQ15257 358 aa16.7■□□□□ 0.26
SEC13-213ENST00000445064 MGAT5BQ3V5L5 792 aa16.7■□□□□ 0.26
SEC13-213ENST00000445064 GPR158Q5T848 1215 aa16.7■□□□□ 0.26
SEC13-213ENST00000445064 FAM173BQ6P4H8 233 aa16.7■□□□□ 0.26
SEC13-213ENST00000445064 LRRTM3Q86VH5 581 aa16.7■□□□□ 0.26
SEC13-213ENST00000445064 METTL23Q86XA0 190 aa16.7■□□□□ 0.26
SEC13-213ENST00000445064 TTC8Q8TAM2 541 aa16.7■□□□□ 0.26
SEC13-213ENST00000445064 FAM200AQ8TCP9 573 aa16.7■□□□□ 0.26
SEC13-213ENST00000445064 POMGNT1Q8WZA1 660 aa16.7■□□□□ 0.26
SEC13-213ENST00000445064 CLIC6Q96NY7 704 aa16.7■□□□□ 0.26
SEC13-213ENST00000445064 LRRC3BQ96PB8 259 aa16.7■□□□□ 0.26
SEC13-213ENST00000445064 SEPT5Q99719 369 aaPredicted RBP16.7■□□□□ 0.26
SEC13-213ENST00000445064 LPIN3Q9BQK8 851 aa16.7■□□□□ 0.26
SEC13-213ENST00000445064 ZCWPW1Q9H0M4 648 aa16.7■□□□□ 0.26
SEC13-213ENST00000445064 TBC1D7Q9P0N9 293 aa16.7■□□□□ 0.26
SEC13-213ENST00000445064 CCDC39Q9UFE4 941 aa16.7■□□□□ 0.26
SEC13-213ENST00000445064 SLC38A8A6NNN8 435 aa16.69■□□□□ 0.26
SEC13-213ENST00000445064 DPYSL4O14531 572 aa16.69■□□□□ 0.26
SEC13-213ENST00000445064 ADSSP30520 456 aa16.69■□□□□ 0.26
SEC13-213ENST00000445064 SOX9P48436 509 aa16.69■□□□□ 0.26
SEC13-213ENST00000445064 TUFMP49411 452 aaKnown RBP16.69■□□□□ 0.26
SEC13-213ENST00000445064 TAF6P49848 677 aa16.69■□□□□ 0.26
SEC13-213ENST00000445064 KPNA1P52294 538 aaPredicted RBP16.69■□□□□ 0.26
SEC13-213ENST00000445064 CEBPZQ03701 1054 aaKnown RBP16.69■□□□□ 0.26
SEC13-213ENST00000445064 KCNA1Q09470 495 aa16.69■□□□□ 0.26
SEC13-213ENST00000445064 FCHO2Q0JRZ9 810 aa16.69■□□□□ 0.26
SEC13-213ENST00000445064 CUL4AQ13619 759 aa16.69■□□□□ 0.26
SEC13-213ENST00000445064 WSCD1Q658N2 575 aa16.69■□□□□ 0.26
SEC13-213ENST00000445064 ITIH5Q86UX2 942 aa16.69■□□□□ 0.26
SEC13-213ENST00000445064 THEM5Q8N1Q8 247 aa16.69■□□□□ 0.26
SEC13-213ENST00000445064 GIPC2Q8TF65 315 aa16.69■□□□□ 0.26
SEC13-213ENST00000445064 ZFYVE19Q96K21 471 aa16.69■□□□□ 0.26
SEC13-213ENST00000445064 HSFX1Q9UBD0 423 aa16.69■□□□□ 0.26
SEC13-213ENST00000445064 FBXO2Q9UK22 296 aaPredicted RBP16.69■□□□□ 0.26
SEC13-213ENST00000445064 DSEQ9UL01 958 aa16.69■□□□□ 0.26
SEC13-213ENST00000445064 C2CD2Q9Y426 696 aa16.69■□□□□ 0.26
SEC13-213ENST00000445064 SPTBN4Q9H254 2564 aa16.68■□□□□ 0.26
SEC13-213ENST00000445064 MYMKA6NI61 221 aa16.68■□□□□ 0.26
SEC13-213ENST00000445064 FGF19O95750 216 aa16.68■□□□□ 0.26
SEC13-213ENST00000445064 TDGF1P13385 188 aa16.68■□□□□ 0.26
SEC13-213ENST00000445064 ATF6P18850 670 aa16.68■□□□□ 0.26
SEC13-213ENST00000445064 MLLT6P55198 1093 aaPredicted RBP16.68■□□□□ 0.26
SEC13-213ENST00000445064 CYP4F8P98187 520 aa16.68■□□□□ 0.26
SEC13-213ENST00000445064 GAS6Q14393 721 aa16.68■□□□□ 0.26
SEC13-213ENST00000445064 POSTNQ15063 836 aa16.68■□□□□ 0.26
SEC13-213ENST00000445064 ARHGAP15Q53QZ3 475 aa16.68■□□□□ 0.26
SEC13-213ENST00000445064 RRAGBQ5VZM2 374 aa16.68■□□□□ 0.26
SEC13-213ENST00000445064 MAMSTRQ6ZN01 415 aa16.68■□□□□ 0.26
SEC13-213ENST00000445064 SV2BQ7L1I2 683 aa16.68■□□□□ 0.26
SEC13-213ENST00000445064 EFCAB13Q8IY85 973 aa16.68■□□□□ 0.26
SEC13-213ENST00000445064 ZSWIM2Q8NEG5 633 aa16.68■□□□□ 0.26
SEC13-213ENST00000445064 DNAJC19Q96DA6 116 aa16.68■□□□□ 0.26
SEC13-213ENST00000445064 STRA6Q9BX79 667 aa16.68■□□□□ 0.26
SEC13-213ENST00000445064 FAM126AQ9BYI3 521 aaPredicted RBP16.68■□□□□ 0.26
SEC13-213ENST00000445064 PANK2Q9BZ23 570 aa16.68■□□□□ 0.26
SEC13-213ENST00000445064 EPC1Q9H2F5 836 aa16.68■□□□□ 0.26
SEC13-213ENST00000445064 MRPL44Q9H9J2 332 aaKnown RBP16.68■□□□□ 0.26
SEC13-213ENST00000445064 RBM12Q9NTZ6 932 aaKnown RBP16.68■□□□□ 0.26
SEC13-213ENST00000445064 STK17AQ9UEE5 414 aa16.68■□□□□ 0.26
SEC13-213ENST00000445064 SMG5Q9UPR3 1016 aaKnown RBP16.68■□□□□ 0.26
SEC13-213ENST00000445064 SRPRBQ9Y5M8 271 aaKnown RBP16.68■□□□□ 0.26
SEC13-213ENST00000445064 SCN1AP35498 2009 aa16.67■□□□□ 0.26
SEC13-213ENST00000445064 KPNA7A9QM74 516 aa16.67■□□□□ 0.26
SEC13-213ENST00000445064 PPP1R37O75864 691 aa16.67■□□□□ 0.26
SEC13-213ENST00000445064 CXCL12P48061 93 aa16.67■□□□□ 0.26
SEC13-213ENST00000445064 NRLP54845 237 aa16.67■□□□□ 0.26
SEC13-213ENST00000445064 WNT7BP56706 349 aa16.67■□□□□ 0.26
SEC13-213ENST00000445064 PUM1Q14671 1186 aaKnown RBP eCLIP16.67■□□□□ 0.26
SEC13-213ENST00000445064 VEPH1Q14D04 833 aa16.67■□□□□ 0.26
SEC13-213ENST00000445064 DGLUCYQ7Z3D6 616 aa16.67■□□□□ 0.26
SEC13-213ENST00000445064 HVCN1Q96D96 273 aa16.67■□□□□ 0.26
SEC13-213ENST00000445064 FAM213AQ9BRX8 229 aa16.67■□□□□ 0.26
SEC13-213ENST00000445064 TASP1Q9H6P5 420 aa16.67■□□□□ 0.26
SEC13-213ENST00000445064 C8orf33Q9H7E9 229 aaPredicted RBP16.67■□□□□ 0.26
SEC13-213ENST00000445064 IL21Q9HBE4 155 aa16.67■□□□□ 0.26
SEC13-213ENST00000445064 GTSE1Q9NYZ3 720 aa16.67■□□□□ 0.26
SEC13-213ENST00000445064 SPECC1L-ADORA2AF8WAN1 911 aa16.66■□□□□ 0.26
SEC13-213ENST00000445064 IL18RAPO95256 599 aa16.66■□□□□ 0.26
SEC13-213ENST00000445064 PRAMEF12O95522 483 aa16.66■□□□□ 0.26
SEC13-213ENST00000445064 HAPLN1P10915 354 aaPredicted RBP16.66■□□□□ 0.26
SEC13-213ENST00000445064 PDCP20941 246 aa16.66■□□□□ 0.26
SEC13-213ENST00000445064 CCR3P51677 355 aa16.66■□□□□ 0.26
SEC13-213ENST00000445064 SATB1Q01826 763 aa16.66■□□□□ 0.26
SEC13-213ENST00000445064 POU5F1Q01860 360 aaKnown RBP16.66■□□□□ 0.26
SEC13-213ENST00000445064 PPP2R5DQ14738 602 aa16.66■□□□□ 0.26
SEC13-213ENST00000445064 TAF12Q16514 161 aa16.66■□□□□ 0.26
SEC13-213ENST00000445064 RSPO4Q2I0M5 234 aaPredicted RBP16.66■□□□□ 0.26
SEC13-213ENST00000445064 SV2CQ496J9 727 aa16.66■□□□□ 0.26
SEC13-213ENST00000445064 ARHGAP29Q52LW3 1261 aa16.66■□□□□ 0.26
SEC13-213ENST00000445064 WDR44Q5JSH3 913 aa16.66■□□□□ 0.26
SEC13-213ENST00000445064 SCARA3Q6AZY7 606 aa16.66■□□□□ 0.26
SEC13-213ENST00000445064 TXNDC11Q6PKC3 985 aa16.66■□□□□ 0.26
SEC13-213ENST00000445064 SECISBP2LQ93073 1101 aaKnown RBP16.66■□□□□ 0.26
SEC13-213ENST00000445064 SAAL1Q96ER3 474 aa16.66■□□□□ 0.26
SEC13-213ENST00000445064 ACCSQ96QU6 501 aa16.66■□□□□ 0.26
SEC13-213ENST00000445064 IER2Q9BTL4 223 aa16.66■□□□□ 0.26
SEC13-213ENST00000445064 SLC46A2Q9BY10 475 aa16.66■□□□□ 0.26
SEC13-213ENST00000445064 SMG9Q9H0W8 520 aaKnown RBP16.66■□□□□ 0.26
SEC13-213ENST00000445064 TMLHEQ9NVH6 421 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms