RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 KIF19Q2TAC6 998 aa23.51■■□□□ 1.35
CTDSPL-206ENST00000443503 CGRRF1Q99675 332 aa23.51■■□□□ 1.35
CTDSPL-206ENST00000443503 RPS6KA5O75582 802 aa23.5■■□□□ 1.35
CTDSPL-206ENST00000443503 TRPA1O75762 1119 aa23.5■■□□□ 1.35
CTDSPL-206ENST00000443503 FAM107AO95990 144 aa23.5■■□□□ 1.35
CTDSPL-206ENST00000443503 YWHAHQ04917 246 aaPredicted RBP23.5■■□□□ 1.35
CTDSPL-206ENST00000443503 PTGISQ16647 500 aa23.5■■□□□ 1.35
CTDSPL-206ENST00000443503 DDX27Q96GQ7 796 aaKnown RBP23.5■■□□□ 1.35
CTDSPL-206ENST00000443503 CYP4F11Q9HBI6 524 aa23.5■■□□□ 1.35
CTDSPL-206ENST00000443503 ABCF3Q9NUQ8 709 aa23.5■■□□□ 1.35
CTDSPL-206ENST00000443503 AMHR2Q16671 573 aa23.5■■□□□ 1.35
CTDSPL-206ENST00000443503 FASTKD1Q53R41 847 aaKnown RBP23.5■■□□□ 1.35
CTDSPL-206ENST00000443503 USP33Q8TEY7 942 aa23.5■■□□□ 1.35
CTDSPL-206ENST00000443503 KLK14Q9P0G3 267 aa23.5■■□□□ 1.35
CTDSPL-206ENST00000443503 CFAP73A6NFT4 308 aa23.5■■□□□ 1.35
CTDSPL-206ENST00000443503 CETPP11597 493 aa23.5■■□□□ 1.35
CTDSPL-206ENST00000443503 MPZL3Q6UWV2 235 aa23.5■■□□□ 1.35
CTDSPL-206ENST00000443503 KCNMB3Q9NPA1 279 aa23.5■■□□□ 1.35
CTDSPL-206ENST00000443503 SCOCQ9UIL1 159 aa23.5■■□□□ 1.35
CTDSPL-206ENST00000443503 ANKRD26Q9UPS8 1709 aa23.5■■□□□ 1.35
CTDSPL-206ENST00000443503 NOTUMQ6P988 496 aa23.5■■□□□ 1.35
CTDSPL-206ENST00000443503 STOML1Q9UBI4 398 aa23.5■■□□□ 1.35
CTDSPL-206ENST00000443503 USH1CQ9Y6N9 552 aa23.5■■□□□ 1.35
CTDSPL-206ENST00000443503 ATRNO75882 1429 aa23.49■■□□□ 1.35
CTDSPL-206ENST00000443503 GNL1P36915 607 aaPredicted RBP23.49■■□□□ 1.35
CTDSPL-206ENST00000443503 GRIK1P39086 918 aa23.49■■□□□ 1.35
CTDSPL-206ENST00000443503 IL1RL1Q01638 556 aa23.49■■□□□ 1.35
CTDSPL-206ENST00000443503 GNASQ5JWF2 1037 aa23.49■■□□□ 1.35
CTDSPL-206ENST00000443503 DNAJC19Q96DA6 116 aa23.49■■□□□ 1.35
CTDSPL-206ENST00000443503 NPHS2Q9NP85 383 aa23.49■■□□□ 1.35
CTDSPL-206ENST00000443503 MARCOQ9UEW3 520 aaPredicted RBP23.49■■□□□ 1.35
CTDSPL-206ENST00000443503 TISP43B9A030 160 aa23.49■■□□□ 1.35
CTDSPL-206ENST00000443503 DSG3P32926 999 aa23.49■■□□□ 1.35
CTDSPL-206ENST00000443503 PTK7Q13308 1070 aa23.49■■□□□ 1.35
CTDSPL-206ENST00000443503 BOLA3Q53S33 107 aa23.49■■□□□ 1.35
CTDSPL-206ENST00000443503 TMTC4Q5T4D3 741 aa23.49■■□□□ 1.35
CTDSPL-206ENST00000443503 ICE2Q659A1 982 aa23.49■■□□□ 1.35
CTDSPL-206ENST00000443503 CISHQ9NSE2 258 aa23.49■■□□□ 1.35
CTDSPL-206ENST00000443503 KLC4Q9NSK0 619 aa23.49■■□□□ 1.35
CTDSPL-206ENST00000443503 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.49■■□□□ 1.351e-7■■□□□ 14.4
CTDSPL-206ENST00000443503 ZWINTO95229 277 aa23.49■■□□□ 1.35
CTDSPL-206ENST00000443503 NSUN2Q08J23 767 aaKnown RBP eCLIP23.49■■□□□ 1.352e-8■■■■■ 36.9
CTDSPL-206ENST00000443503 FAXCQ5TGI0 409 aa23.49■■□□□ 1.35
CTDSPL-206ENST00000443503 FBXW10Q5XX13 1052 aa23.49■■□□□ 1.35
CTDSPL-206ENST00000443503 LRRC55Q6ZSA7 311 aa23.49■■□□□ 1.35
CTDSPL-206ENST00000443503 KATNAL1Q9BW62 490 aa23.49■■□□□ 1.35
CTDSPL-206ENST00000443503 EPHB6O15197 1021 aa23.48■■□□□ 1.35
CTDSPL-206ENST00000443503 PSTPIP1O43586 416 aa23.48■■□□□ 1.35
CTDSPL-206ENST00000443503 HABP4Q5JVS0 413 aaKnown RBP23.48■■□□□ 1.35
CTDSPL-206ENST00000443503 ARHGEF19Q8IW93 802 aa23.48■■□□□ 1.35
CTDSPL-206ENST00000443503 ALKBH8Q96BT7 664 aaKnown RBP23.48■■□□□ 1.35
CTDSPL-206ENST00000443503 DPP3Q9NY33 737 aa23.48■■□□□ 1.35
CTDSPL-206ENST00000443503 ZNF157P51786 506 aaPredicted RBP23.48■■□□□ 1.35
CTDSPL-206ENST00000443503 SPATA2LQ8IUW3 424 aaPredicted RBP23.48■■□□□ 1.35
CTDSPL-206ENST00000443503 PARP9Q8IXQ6 854 aa23.48■■□□□ 1.35
CTDSPL-206ENST00000443503 TRIM62Q9BVG3 475 aa23.48■■□□□ 1.35
CTDSPL-206ENST00000443503 UPF3AQ9H1J1 476 aaKnown RBP23.48■■□□□ 1.35
CTDSPL-206ENST00000443503 SARS2Q9NP81 518 aaKnown RBP23.48■■□□□ 1.35
CTDSPL-206ENST00000443503 RRN3P2A6NIE6 340 aa23.48■■□□□ 1.35
CTDSPL-206ENST00000443503 C3orf70A6NLC5 250 aaPredicted RBP23.48■■□□□ 1.35
CTDSPL-206ENST00000443503 TGFB2P61812 414 aa23.48■■□□□ 1.35
CTDSPL-206ENST00000443503 KIZQ2M2Z5 673 aa23.48■■□□□ 1.35
CTDSPL-206ENST00000443503 ANKRD20A4Q4UJ75 823 aa23.48■■□□□ 1.35
CTDSPL-206ENST00000443503 CBWD6Q4V339 395 aa23.48■■□□□ 1.35
CTDSPL-206ENST00000443503 ANKRD20A8PQ5CZ79 823 aa23.48■■□□□ 1.35
CTDSPL-206ENST00000443503 CBWD3Q5JTY5 395 aa23.48■■□□□ 1.35
CTDSPL-206ENST00000443503 CBWD5Q5RIA9 395 aa23.48■■□□□ 1.35
CTDSPL-206ENST00000443503 ANKRD20A2Q5SQ80 823 aa23.48■■□□□ 1.35
CTDSPL-206ENST00000443503 ANKRD20A1Q5TYW2 823 aa23.48■■□□□ 1.35
CTDSPL-206ENST00000443503 EPS8L3Q8TE67 593 aaKnown RBP23.48■■□□□ 1.35
CTDSPL-206ENST00000443503 GTF3C2Q8WUA4 911 aaPredicted RBP23.48■■□□□ 1.35
CTDSPL-206ENST00000443503 TSSK1BQ9BXA7 367 aa23.48■■□□□ 1.35
CTDSPL-206ENST00000443503 WWP1Q9H0M0 922 aa23.48■■□□□ 1.35
CTDSPL-206ENST00000443503 RAB21Q9UL25 225 aa23.48■■□□□ 1.35
CTDSPL-206ENST00000443503 SMIM24O75264 130 aa23.48■■□□□ 1.35
CTDSPL-206ENST00000443503 ERFP50548 548 aa23.48■■□□□ 1.35
CTDSPL-206ENST00000443503 DRP2Q13474 957 aa23.48■■□□□ 1.35
CTDSPL-206ENST00000443503 CDC26Q8NHZ8 85 aa23.48■■□□□ 1.35
CTDSPL-206ENST00000443503 SPATC1LQ9H0A9 340 aa23.48■■□□□ 1.35
CTDSPL-206ENST00000443503 PROSCO94903 275 aa23.47■■□□□ 1.35
CTDSPL-206ENST00000443503 PPARGP37231 505 aaPredicted RBP23.47■■□□□ 1.35
CTDSPL-206ENST00000443503 HUNKP57058 714 aa23.47■■□□□ 1.35
CTDSPL-206ENST00000443503 METTL7BQ6UX53 244 aa23.47■■□□□ 1.35
CTDSPL-206ENST00000443503 SLC7A14Q8TBB6 771 aa23.47■■□□□ 1.35
CTDSPL-206ENST00000443503 GNGT2O14610 69 aa23.47■■□□□ 1.35
CTDSPL-206ENST00000443503 ZBTB24O43167 697 aaPredicted RBP23.47■■□□□ 1.35
CTDSPL-206ENST00000443503 ACOT1Q86TX2 421 aa23.47■■□□□ 1.35
CTDSPL-206ENST00000443503 FGD4Q96M96 766 aa23.47■■□□□ 1.35
CTDSPL-206ENST00000443503 PCMTD2Q9NV79 361 aa23.47■■□□□ 1.35
CTDSPL-206ENST00000443503 SUN2Q9UH99 717 aa23.47■■□□□ 1.35
CTDSPL-206ENST00000443503 EEF2KO00418 725 aaKnown RBP23.47■■□□□ 1.35
CTDSPL-206ENST00000443503 VTNP04004 478 aa23.47■■□□□ 1.35
CTDSPL-206ENST00000443503 CYP3A4P08684 503 aa23.47■■□□□ 1.35
CTDSPL-206ENST00000443503 FGRP09769 529 aa23.47■■□□□ 1.35
CTDSPL-206ENST00000443503 RFX8Q6ZV50 586 aa23.47■■□□□ 1.35
CTDSPL-206ENST00000443503 PPIL6Q8IXY8 311 aa23.47■■□□□ 1.35
CTDSPL-206ENST00000443503 PARD3BQ8TEW8 1205 aa23.47■■□□□ 1.35
CTDSPL-206ENST00000443503 GCNAQ96QF7 691 aa23.47■■□□□ 1.35
CTDSPL-206ENST00000443503 PPFIA2O75334 1257 aa23.47■■□□□ 1.35
CTDSPL-206ENST00000443503 ACADSBP45954 432 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms