RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 SCAMP4Q969E2 229 aa5.88□□□□□ -1.47
VPS50-206ENST00000443443 PGBD1Q96JS3 809 aa5.88□□□□□ -1.47
VPS50-206ENST00000443443 ASPSCR1Q9BZE9 553 aa5.88□□□□□ -1.47
VPS50-206ENST00000443443 KLK15Q9H2R5 256 aa5.88□□□□□ -1.47
VPS50-206ENST00000443443 HOMER2Q9NSB8 354 aa5.88□□□□□ -1.47
VPS50-206ENST00000443443 SEMA4GQ9NTN9 838 aa5.88□□□□□ -1.47
VPS50-206ENST00000443443 SIDT1Q9NXL6 827 aaKnown RBP5.88□□□□□ -1.47
VPS50-206ENST00000443443 CCDC151A5D8V7 595 aa5.87□□□□□ -1.47
VPS50-206ENST00000443443 VPS4BO75351 444 aa5.87□□□□□ -1.47
VPS50-206ENST00000443443 IL33O95760 270 aa5.87□□□□□ -1.47
VPS50-206ENST00000443443 S100BP04271 92 aaPredicted RBP5.87□□□□□ -1.47
VPS50-206ENST00000443443 POU6F2P78424 691 aaPredicted RBP5.87□□□□□ -1.47
VPS50-206ENST00000443443 HLXQ14774 488 aaPredicted RBP5.87□□□□□ -1.47
VPS50-206ENST00000443443 CCDC157Q569K6 752 aa5.87□□□□□ -1.47
VPS50-206ENST00000443443 THEMIS2Q5TEJ8 643 aa5.87□□□□□ -1.47
VPS50-206ENST00000443443 GRASPQ7Z6J2 395 aaPredicted RBP5.87□□□□□ -1.47
VPS50-206ENST00000443443 PEG10Q86TG7 708 aaKnown RBP5.87□□□□□ -1.47
VPS50-206ENST00000443443 PDSS2Q86YH6 399 aa5.87□□□□□ -1.47
VPS50-206ENST00000443443 CCDC146Q8IYE0 955 aa5.87□□□□□ -1.47
VPS50-206ENST00000443443 SH2D3CQ8N5H7 860 aa5.87□□□□□ -1.47
VPS50-206ENST00000443443 TNPO1Q92973 898 aaKnown RBP5.87□□□□□ -1.47
VPS50-206ENST00000443443 C1orf43Q9BWL3 253 aa5.87□□□□□ -1.47
VPS50-206ENST00000443443 CPNE5Q9HCH3 593 aa5.87□□□□□ -1.47
VPS50-206ENST00000443443 CFAP97Q9P2B7 532 aa5.87□□□□□ -1.47
VPS50-206ENST00000443443 LAS1LQ9Y4W2 734 aaKnown RBP5.87□□□□□ -1.47
VPS50-206ENST00000443443 LRRC3CA6NJW4 275 aa5.86□□□□□ -1.47
VPS50-206ENST00000443443 E9PLN8 166 aa5.86□□□□□ -1.47
VPS50-206ENST00000443443 SH3BP5O60239 455 aa5.86□□□□□ -1.47
VPS50-206ENST00000443443 ZRANB2O95218 330 aaKnown RBP eCLIP5.86□□□□□ -1.47
VPS50-206ENST00000443443 ARIH2O95376 493 aa5.86□□□□□ -1.47
VPS50-206ENST00000443443 MATN4O95460 622 aa5.86□□□□□ -1.47
VPS50-206ENST00000443443 PPP3CBP16298 524 aa5.86□□□□□ -1.47
VPS50-206ENST00000443443 NPTX2P47972 431 aa5.86□□□□□ -1.47
VPS50-206ENST00000443443 ZNF135P52742 658 aaPredicted RBP5.86□□□□□ -1.47
VPS50-206ENST00000443443 MAPK10P53779 464 aa5.86□□□□□ -1.47
VPS50-206ENST00000443443 PLEKHG6Q3KR16 790 aa5.86□□□□□ -1.47
VPS50-206ENST00000443443 TSTD2Q5T7W7 516 aa5.86□□□□□ -1.47
VPS50-206ENST00000443443 MYCBPAPQ8TBZ2 947 aa5.86□□□□□ -1.47
VPS50-206ENST00000443443 VKORC1Q9BQB6 163 aa5.86□□□□□ -1.47
VPS50-206ENST00000443443 GABBR1Q9UBS5 961 aa5.86□□□□□ -1.47
VPS50-206ENST00000443443 ABCF2Q9UG63 623 aa5.86□□□□□ -1.47
VPS50-206ENST00000443443 ST3GAL5Q9UNP4 418 aa5.86□□□□□ -1.47
VPS50-206ENST00000443443 LUC7L2Q9Y383 392 aaKnown RBP5.86□□□□□ -1.47
VPS50-206ENST00000443443 A0A0B4J269 797 aa5.85□□□□□ -1.47
VPS50-206ENST00000443443 NT5C1B-RDH14C9J2C7 533 aa5.85□□□□□ -1.47
VPS50-206ENST00000443443 ADM5C9JUS6 153 aa5.85□□□□□ -1.47
VPS50-206ENST00000443443 E7ENX8 843 aa5.85□□□□□ -1.47
VPS50-206ENST00000443443 PROM1O43490 865 aa5.85□□□□□ -1.47
VPS50-206ENST00000443443 TRIAP1O43715 76 aa5.85□□□□□ -1.47
VPS50-206ENST00000443443 DTNBO60941 627 aa5.85□□□□□ -1.47
VPS50-206ENST00000443443 GRIA3P42263 894 aa5.85□□□□□ -1.47
VPS50-206ENST00000443443 IL12RB1P42701 662 aa5.85□□□□□ -1.47
VPS50-206ENST00000443443 PIK3CGP48736 1102 aa5.85□□□□□ -1.47
VPS50-206ENST00000443443 HNRNPMP52272 730 aaKnown RBP eCLIP5.85□□□□□ -1.47
VPS50-206ENST00000443443 TAP2Q03519 686 aa5.85□□□□□ -1.47
VPS50-206ENST00000443443 ITIH3Q06033 890 aa5.85□□□□□ -1.47
VPS50-206ENST00000443443 TUBB3Q13509 450 aa5.85□□□□□ -1.47
VPS50-206ENST00000443443 HABP2Q14520 560 aaPredicted RBP5.85□□□□□ -1.47
VPS50-206ENST00000443443 PTPRRQ15256 657 aa5.85□□□□□ -1.47
VPS50-206ENST00000443443 NBPF8Q3BBV2 869 aa5.85□□□□□ -1.47
VPS50-206ENST00000443443 KIAA0895LQ68EN5 471 aa5.85□□□□□ -1.47
VPS50-206ENST00000443443 HEATR3Q7Z4Q2 680 aa5.85□□□□□ -1.47
VPS50-206ENST00000443443 TPSD1Q9BZJ3 242 aa5.85□□□□□ -1.47
VPS50-206ENST00000443443 G3BP2Q9UN86 482 aaKnown RBP5.85□□□□□ -1.47
VPS50-206ENST00000443443 FTLP02792 175 aaPredicted RBP5.84□□□□□ -1.47
VPS50-206ENST00000443443 CHRM3P20309 590 aa5.84□□□□□ -1.47
VPS50-206ENST00000443443 LMO1P25800 156 aa5.84□□□□□ -1.47
VPS50-206ENST00000443443 PRDX5P30044 214 aa5.84□□□□□ -1.47
VPS50-206ENST00000443443 NDUFV1P49821 464 aa5.84□□□□□ -1.47
VPS50-206ENST00000443443 NXPH1P58417 271 aa5.84□□□□□ -1.47
VPS50-206ENST00000443443 FAM153CQ494X1 144 aa5.84□□□□□ -1.47
VPS50-206ENST00000443443 LONRF3Q496Y0 759 aa5.84□□□□□ -1.47
VPS50-206ENST00000443443 USP45Q70EL2 814 aa5.84□□□□□ -1.47
VPS50-206ENST00000443443 ZBTB46Q86UZ6 589 aa5.84□□□□□ -1.47
VPS50-206ENST00000443443 GPATCH11Q8N954 259 aa5.84□□□□□ -1.47
VPS50-206ENST00000443443 POC1BQ8TC44 478 aa5.84□□□□□ -1.47
VPS50-206ENST00000443443 RGMAQ96B86 450 aa5.84□□□□□ -1.47
VPS50-206ENST00000443443 UROC1Q96N76 676 aa5.84□□□□□ -1.47
VPS50-206ENST00000443443 CNPPD1Q9BV87 410 aa5.84□□□□□ -1.47
VPS50-206ENST00000443443 SIK2Q9H0K1 926 aa5.84□□□□□ -1.47
VPS50-206ENST00000443443 SMOC2Q9H3U7 446 aa5.84□□□□□ -1.47
VPS50-206ENST00000443443 RLIMQ9NVW2 624 aa5.84□□□□□ -1.47
VPS50-206ENST00000443443 PRSS29PA6NIE9 313 aa5.83□□□□□ -1.48
VPS50-206ENST00000443443 SLC16A6O15403 523 aa5.83□□□□□ -1.48
VPS50-206ENST00000443443 KIF20AO95235 890 aa5.83□□□□□ -1.48
VPS50-206ENST00000443443 CHEK2O96017 543 aa5.83□□□□□ -1.48
VPS50-206ENST00000443443 GNAI2P04899 355 aa5.83□□□□□ -1.48
VPS50-206ENST00000443443 FTH1P19P0C7X4 201 aa5.83□□□□□ -1.48
VPS50-206ENST00000443443 RARBP10826 455 aa5.83□□□□□ -1.48
VPS50-206ENST00000443443 GPD1P21695 349 aa5.83□□□□□ -1.48
VPS50-206ENST00000443443 LPOP22079 712 aaPredicted RBP5.83□□□□□ -1.48
VPS50-206ENST00000443443 NOGQ13253 232 aa5.83□□□□□ -1.48
VPS50-206ENST00000443443 BIRC2Q13490 618 aa5.83□□□□□ -1.48
VPS50-206ENST00000443443 BRDTQ58F21 947 aaPredicted RBP5.83□□□□□ -1.48
VPS50-206ENST00000443443 ZKSCAN2Q63HK3 967 aa5.83□□□□□ -1.48
VPS50-206ENST00000443443 TAF2Q6P1X5 1199 aa5.83□□□□□ -1.48
VPS50-206ENST00000443443 USP37Q86T82 979 aa5.83□□□□□ -1.48
VPS50-206ENST00000443443 CPA6Q8N4T0 437 aa5.83□□□□□ -1.48
VPS50-206ENST00000443443 PSD4Q8NDX1 1056 aa5.83□□□□□ -1.48
VPS50-206ENST00000443443 HSPBAP1Q96EW2 488 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms