RNA–Protein interactions for RNA: ENST00000442653.1

TOP3B-209, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-209ENST00000442653 SPATA1Q5VX52 437 aa9.05□□□□□ -0.96
TOP3B-209ENST00000442653 LAIR1Q6GTX8 287 aa9.05□□□□□ -0.96
TOP3B-209ENST00000442653 JADE1Q6IE81 842 aa9.05□□□□□ -0.96
TOP3B-209ENST00000442653 DSTYKQ6XUX3 929 aa9.05□□□□□ -0.96
TOP3B-209ENST00000442653 PRR23BQ6ZRT6 265 aa9.05□□□□□ -0.96
TOP3B-209ENST00000442653 DNAJB7Q7Z6W7 309 aaPredicted RBP9.05□□□□□ -0.96
TOP3B-209ENST00000442653 GPBP1Q86WP2 473 aa9.05□□□□□ -0.96
TOP3B-209ENST00000442653 SPEM1Q8N4L4 309 aa9.05□□□□□ -0.96
TOP3B-209ENST00000442653 CELF5Q8N6W0 485 aaKnown RBP9.05□□□□□ -0.96
TOP3B-209ENST00000442653 CSGALNACT1Q8TDX6 532 aa9.05□□□□□ -0.96
TOP3B-209ENST00000442653 PSMG2Q969U7 264 aa9.05□□□□□ -0.96
TOP3B-209ENST00000442653 CDK5RAP3Q96JB5 506 aa9.05□□□□□ -0.96
TOP3B-209ENST00000442653 SENP8Q96LD8 212 aa9.05□□□□□ -0.96
TOP3B-209ENST00000442653 CNTNAP3BQ96NU0 1288 aa9.05□□□□□ -0.96
TOP3B-209ENST00000442653 MSTO1Q9BUK6 570 aa9.05□□□□□ -0.96
TOP3B-209ENST00000442653 OXCT2Q9BYC2 517 aaPredicted RBP9.05□□□□□ -0.96
TOP3B-209ENST00000442653 CNTNAP3Q9BZ76 1288 aa9.05□□□□□ -0.96
TOP3B-209ENST00000442653 GPR88Q9GZN0 384 aa9.05□□□□□ -0.96
TOP3B-209ENST00000442653 LARSQ9P2J5 1176 aaKnown RBP9.05□□□□□ -0.96
TOP3B-209ENST00000442653 KCNG1Q9UIX4 513 aa9.05□□□□□ -0.96
TOP3B-209ENST00000442653 GMEB2Q9UKD1 530 aa9.05□□□□□ -0.96
TOP3B-209ENST00000442653 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.05□□□□□ -0.96
TOP3B-209ENST00000442653 SCN1AP35498 2009 aa9.04□□□□□ -0.96
TOP3B-209ENST00000442653 MYBPHLA2RUH7 354 aa9.04□□□□□ -0.96
TOP3B-209ENST00000442653 H0YCG3 227 aa9.04□□□□□ -0.96
TOP3B-209ENST00000442653 K7ENM7 598 aa9.04□□□□□ -0.96
TOP3B-209ENST00000442653 PIRO00625 290 aa9.04□□□□□ -0.96
TOP3B-209ENST00000442653 OGTO15294 1046 aa9.04□□□□□ -0.96
TOP3B-209ENST00000442653 MAP3K13O43283 966 aa9.04□□□□□ -0.96
TOP3B-209ENST00000442653 CD2BP2O95400 341 aaKnown RBP9.04□□□□□ -0.96
TOP3B-209ENST00000442653 ODC1P11926 461 aa9.04□□□□□ -0.96
TOP3B-209ENST00000442653 ATF6P18850 670 aa9.04□□□□□ -0.96
TOP3B-209ENST00000442653 GABRR2P28476 465 aa9.04□□□□□ -0.96
TOP3B-209ENST00000442653 KPNA1P52294 538 aaPredicted RBP9.04□□□□□ -0.96
TOP3B-209ENST00000442653 GRIN1Q05586 938 aa9.04□□□□□ -0.96
TOP3B-209ENST00000442653 CCINQ13939 588 aa9.04□□□□□ -0.96
TOP3B-209ENST00000442653 SIM2Q14190 667 aaPredicted RBP9.04□□□□□ -0.96
TOP3B-209ENST00000442653 MYBPC2Q14324 1141 aa9.04□□□□□ -0.96
TOP3B-209ENST00000442653 DHX8Q14562 1220 aaKnown RBP9.04□□□□□ -0.96
TOP3B-209ENST00000442653 PPP2R5DQ14738 602 aa9.04□□□□□ -0.96
TOP3B-209ENST00000442653 KYAT1Q16773 422 aa9.04□□□□□ -0.96
TOP3B-209ENST00000442653 GPR158Q5T848 1215 aa9.04□□□□□ -0.96
TOP3B-209ENST00000442653 C9orf57Q5W0N0 161 aa9.04□□□□□ -0.96
TOP3B-209ENST00000442653 ARL6IP4Q66PJ3 421 aaKnown RBP9.04□□□□□ -0.96
TOP3B-209ENST00000442653 HEATR6Q6AI08 1181 aaKnown RBP9.04□□□□□ -0.96
TOP3B-209ENST00000442653 YAF2Q8IY57 180 aa9.04□□□□□ -0.96
TOP3B-209ENST00000442653 KCTD17Q8N5Z5 321 aa9.04□□□□□ -0.96
TOP3B-209ENST00000442653 E2F7Q96AV8 911 aa9.04□□□□□ -0.96
TOP3B-209ENST00000442653 FIZ1Q96SL8 496 aa9.04□□□□□ -0.96
TOP3B-209ENST00000442653 LPIN3Q9BQK8 851 aa9.04□□□□□ -0.96
TOP3B-209ENST00000442653 SMG9Q9H0W8 520 aaKnown RBP9.04□□□□□ -0.96
TOP3B-209ENST00000442653 IKZF4Q9H2S9 585 aa9.04□□□□□ -0.96
TOP3B-209ENST00000442653 ATXN3LQ9H3M9 355 aa9.04□□□□□ -0.96
TOP3B-209ENST00000442653 RPF1Q9H9Y2 349 aaKnown RBP9.04□□□□□ -0.96
TOP3B-209ENST00000442653 IL21Q9HBE4 155 aa9.04□□□□□ -0.96
TOP3B-209ENST00000442653 BLOC1S4Q9NUP1 217 aa9.04□□□□□ -0.96
TOP3B-209ENST00000442653 CPSF3Q9UKF6 684 aaKnown RBP9.04□□□□□ -0.96
TOP3B-209ENST00000442653 ODF2LQ9ULJ1 636 aa9.04□□□□□ -0.96
TOP3B-209ENST00000442653 ASB3Q9Y575 518 aa9.04□□□□□ -0.96
TOP3B-209ENST00000442653 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.04□□□□□ -0.96
TOP3B-209ENST00000442653 NUP210Q8TEM1 1887 aaPredicted RBP9.04□□□□□ -0.96
TOP3B-209ENST00000442653 ANO9A1A5B4 782 aa9.03□□□□□ -0.96
TOP3B-209ENST00000442653 ANKRD63C9JTQ0 380 aa9.03□□□□□ -0.96
TOP3B-209ENST00000442653 RIOK3O14730 519 aaKnown RBP9.03□□□□□ -0.96
TOP3B-209ENST00000442653 XPOTO43592 962 aaKnown RBP9.03□□□□□ -0.96
TOP3B-209ENST00000442653 FAM13AO94988 1023 aa9.03□□□□□ -0.96
TOP3B-209ENST00000442653 PAPSS2O95340 614 aaPredicted RBP9.03□□□□□ -0.96
TOP3B-209ENST00000442653 RETP07949 1114 aa9.03□□□□□ -0.96
TOP3B-209ENST00000442653 PLCG1P19174 1290 aa9.03□□□□□ -0.96
TOP3B-209ENST00000442653 SDHBP21912 280 aa9.03□□□□□ -0.96
TOP3B-209ENST00000442653 NMT1P30419 496 aaKnown RBP9.03□□□□□ -0.96
TOP3B-209ENST00000442653 ACOT2P49753 483 aa9.03□□□□□ -0.96
TOP3B-209ENST00000442653 CYP4F8P98187 520 aa9.03□□□□□ -0.96
TOP3B-209ENST00000442653 LRRC32Q14392 662 aa9.03□□□□□ -0.96
TOP3B-209ENST00000442653 MCM6Q14566 821 aa9.03□□□□□ -0.96
TOP3B-209ENST00000442653 TMEM132DQ14C87 1099 aa9.03□□□□□ -0.96
TOP3B-209ENST00000442653 PON2Q15165 354 aa9.03□□□□□ -0.96
TOP3B-209ENST00000442653 C8orf34Q49A92 452 aa9.03□□□□□ -0.96
TOP3B-209ENST00000442653 SLC39A12Q504Y0 691 aa9.03□□□□□ -0.96
TOP3B-209ENST00000442653 ZC2HC1CQ53FD0 456 aaPredicted RBP9.03□□□□□ -0.96
TOP3B-209ENST00000442653 ARMCX5Q6P1M9 558 aa9.03□□□□□ -0.96
TOP3B-209ENST00000442653 PKN3Q6P5Z2 889 aa9.03□□□□□ -0.96
TOP3B-209ENST00000442653 LRRTM3Q86VH5 581 aa9.03□□□□□ -0.96
TOP3B-209ENST00000442653 RALGPS2Q86X27 583 aaPredicted RBP9.03□□□□□ -0.96
TOP3B-209ENST00000442653 MYCT1Q8N699 235 aa9.03□□□□□ -0.96
TOP3B-209ENST00000442653 CHFRQ96EP1 664 aa9.03□□□□□ -0.96
TOP3B-209ENST00000442653 MSANTD3Q96H12 275 aa9.03□□□□□ -0.96
TOP3B-209ENST00000442653 TMX3Q96JJ7 454 aa9.03□□□□□ -0.96
TOP3B-209ENST00000442653 TSPAN18Q96SJ8 248 aa9.03□□□□□ -0.96
TOP3B-209ENST00000442653 SEPT5Q99719 369 aaPredicted RBP9.03□□□□□ -0.96
TOP3B-209ENST00000442653 RTKNQ9BST9 563 aa9.03□□□□□ -0.96
TOP3B-209ENST00000442653 SLC46A2Q9BY10 475 aa9.03□□□□□ -0.96
TOP3B-209ENST00000442653 ZCWPW1Q9H0M4 648 aa9.03□□□□□ -0.96
TOP3B-209ENST00000442653 TASP1Q9H6P5 420 aa9.03□□□□□ -0.96
TOP3B-209ENST00000442653 C8orf33Q9H7E9 229 aaPredicted RBP9.03□□□□□ -0.96
TOP3B-209ENST00000442653 PARVGQ9HBI0 331 aa9.03□□□□□ -0.96
TOP3B-209ENST00000442653 SEMA4GQ9NTN9 838 aa9.03□□□□□ -0.96
TOP3B-209ENST00000442653 HSFX1Q9UBD0 423 aa9.03□□□□□ -0.96
TOP3B-209ENST00000442653 RAB23Q9ULC3 237 aa9.03□□□□□ -0.96
TOP3B-209ENST00000442653 ASPMQ8IZT6 3477 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms