RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 IFRD2Q12894 506 aaPredicted RBP10.78□□□□□ -0.68
LIN54-202ENST00000442461 DEPDC1Q5TB30 811 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 TTC39BQ5VTQ0 682 aaPredicted RBP10.78□□□□□ -0.68
LIN54-202ENST00000442461 ITPRIPL1Q6GPH6 555 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 CCDC60Q8IWA6 550 aaPredicted RBP10.78□□□□□ -0.68
LIN54-202ENST00000442461 SCFD1Q8WVM8 642 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 RSPH1Q8WYR4 309 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 SYT15Q9BQS2 421 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 SLC52A2Q9HAB3 445 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 ZC3H7BQ9UGR2 993 aaKnown RBP10.78□□□□□ -0.68
LIN54-202ENST00000442461 IP6K2Q9UHH9 426 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 FADS3Q9Y5Q0 445 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 ACTL7BQ9Y614 415 aa10.78□□□□□ -0.68
LIN54-202ENST00000442461 H0YCG3 227 aa10.77□□□□□ -0.68
LIN54-202ENST00000442461 PDLIM1O00151 329 aa10.77□□□□□ -0.68
LIN54-202ENST00000442461 MAP3K13O43283 966 aa10.77□□□□□ -0.68
LIN54-202ENST00000442461 ABL1P00519 1130 aa10.77□□□□□ -0.68
LIN54-202ENST00000442461 PAEPP09466 180 aa10.77□□□□□ -0.68
LIN54-202ENST00000442461 RPL21P46778 160 aaKnown RBP10.77□□□□□ -0.68
LIN54-202ENST00000442461 DLG4P78352 724 aa10.77□□□□□ -0.68
LIN54-202ENST00000442461 ADAM17P78536 824 aa10.77□□□□□ -0.68
LIN54-202ENST00000442461 DGUOKQ16854 277 aa10.77□□□□□ -0.68
LIN54-202ENST00000442461 C11orf91Q3C1V1 193 aa10.77□□□□□ -0.68
LIN54-202ENST00000442461 AASDHQ4L235 1098 aaPredicted RBP10.77□□□□□ -0.68
LIN54-202ENST00000442461 LCORLQ8N3X6 602 aa10.77□□□□□ -0.68
LIN54-202ENST00000442461 L3MBTL3Q96JM7 780 aaPredicted RBP10.77□□□□□ -0.68
LIN54-202ENST00000442461 C2CD2LO14523 706 aa10.77□□□□□ -0.69
LIN54-202ENST00000442461 CAMTA2O94983 1202 aa10.77□□□□□ -0.69
LIN54-202ENST00000442461 POLR2MP0CAP2 368 aa10.77□□□□□ -0.69
LIN54-202ENST00000442461 PSMA4P25789 261 aaKnown RBP10.77□□□□□ -0.69
LIN54-202ENST00000442461 MAPKAPK5Q8IW41 473 aa10.77□□□□□ -0.69
LIN54-202ENST00000442461 ATP6V1E2Q96A05 226 aa10.77□□□□□ -0.69
LIN54-202ENST00000442461 ZNF333Q96JL9 665 aa10.77□□□□□ -0.69
LIN54-202ENST00000442461 OSBPL6Q9BZF3 934 aa10.77□□□□□ -0.69
LIN54-202ENST00000442461 IPO11Q9UI26 975 aaKnown RBP10.77□□□□□ -0.69
LIN54-202ENST00000442461 RAPGEF6Q8TEU7 1601 aa10.77□□□□□ -0.69
LIN54-202ENST00000442461 ATP10AO60312 1499 aa10.77□□□□□ -0.69
LIN54-202ENST00000442461 TMEM191CA6NGB0 347 aa10.77□□□□□ -0.69
LIN54-202ENST00000442461 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.77□□□□□ -0.69
LIN54-202ENST00000442461 HNRNPDLO14979 420 aaKnown RBP10.77□□□□□ -0.69
LIN54-202ENST00000442461 TMEM191BP0C7N4 346 aa10.77□□□□□ -0.69
LIN54-202ENST00000442461 VCLP18206 1134 aa10.77□□□□□ -0.69
LIN54-202ENST00000442461 HLA-DPA1P20036 260 aa10.77□□□□□ -0.69
LIN54-202ENST00000442461 CCT3P49368 545 aaKnown RBP10.77□□□□□ -0.69
LIN54-202ENST00000442461 WASHC5Q12768 1159 aa10.77□□□□□ -0.69
LIN54-202ENST00000442461 ALX1Q15699 326 aa10.77□□□□□ -0.69
LIN54-202ENST00000442461 EXOC3L1Q86VI1 746 aa10.77□□□□□ -0.69
LIN54-202ENST00000442461 OTUD5Q96G74 571 aa10.77□□□□□ -0.69
LIN54-202ENST00000442461 NACC1Q96RE7 527 aa10.77□□□□□ -0.69
LIN54-202ENST00000442461 ZBTB18Q99592 522 aa10.77□□□□□ -0.69
LIN54-202ENST00000442461 REXO4Q9GZR2 422 aaKnown RBP10.77□□□□□ -0.69
LIN54-202ENST00000442461 EXOSC4Q9NPD3 245 aaKnown RBP10.77□□□□□ -0.69
LIN54-202ENST00000442461 RPRD1BQ9NQG5 326 aaKnown RBP10.77□□□□□ -0.69
LIN54-202ENST00000442461 IARS2Q9NSE4 1012 aaKnown RBP10.77□□□□□ -0.69
LIN54-202ENST00000442461 KIF17Q9P2E2 1029 aa10.77□□□□□ -0.69
LIN54-202ENST00000442461 DSEQ9UL01 958 aa10.77□□□□□ -0.69
LIN54-202ENST00000442461 LRRC42Q9Y546 428 aa10.77□□□□□ -0.69
LIN54-202ENST00000442461 BICRAQ9NZM4 1560 aa10.77□□□□□ -0.69
LIN54-202ENST00000442461 FRMPD2Q68DX3 1309 aaPredicted RBP10.77□□□□□ -0.69
LIN54-202ENST00000442461 MYO3BQ8WXR4 1341 aa10.77□□□□□ -0.69
LIN54-202ENST00000442461 ZNF609O15014 1411 aa10.76□□□□□ -0.69
LIN54-202ENST00000442461 LINC00854A0A1B0GVQ3 168 aa10.76□□□□□ -0.69
LIN54-202ENST00000442461 PDXKO00764 312 aa10.76□□□□□ -0.69
LIN54-202ENST00000442461 GSC2O15499 205 aa10.76□□□□□ -0.69
LIN54-202ENST00000442461 RGS5O15539 181 aa10.76□□□□□ -0.69
LIN54-202ENST00000442461 PSTPIP1O43586 416 aa10.76□□□□□ -0.69
LIN54-202ENST00000442461 CD58P19256 250 aa10.76□□□□□ -0.69
LIN54-202ENST00000442461 SLC15A2Q16348 729 aa10.76□□□□□ -0.69
LIN54-202ENST00000442461 EDRF1Q3B7T1 1238 aa10.76□□□□□ -0.69
LIN54-202ENST00000442461 NOP9Q86U38 636 aaKnown RBP10.76□□□□□ -0.69
LIN54-202ENST00000442461 SRBD1Q8N5C6 995 aaKnown RBP10.76□□□□□ -0.69
LIN54-202ENST00000442461 CCDC33Q8N5R6 958 aa10.76□□□□□ -0.69
LIN54-202ENST00000442461 KYQ8NBH2 561 aa10.76□□□□□ -0.69
LIN54-202ENST00000442461 DNAJC1Q96KC8 554 aaKnown RBP10.76□□□□□ -0.69
LIN54-202ENST00000442461 PHF20Q9BVI0 1012 aa10.76□□□□□ -0.69
LIN54-202ENST00000442461 NSMCE4AQ9NXX6 385 aa10.76□□□□□ -0.69
LIN54-202ENST00000442461 FLT1P17948 1338 aa10.76□□□□□ -0.69
LIN54-202ENST00000442461 SALL3Q9BXA9 1300 aa10.76□□□□□ -0.69
LIN54-202ENST00000442461 NPR1P16066 1061 aa10.76□□□□□ -0.69
LIN54-202ENST00000442461 C4BPBP20851 252 aa10.76□□□□□ -0.69
LIN54-202ENST00000442461 PPP6R3Q5H9R7 873 aaPredicted RBP10.76□□□□□ -0.69
LIN54-202ENST00000442461 ATG14Q6ZNE5 492 aa10.76□□□□□ -0.69
LIN54-202ENST00000442461 PIGWQ7Z7B1 504 aa10.76□□□□□ -0.69
LIN54-202ENST00000442461 UBE2Q1Q7Z7E8 422 aa10.76□□□□□ -0.69
LIN54-202ENST00000442461 AKAP14Q86UN6 197 aa10.76□□□□□ -0.69
LIN54-202ENST00000442461 RCOR2Q8IZ40 523 aa10.76□□□□□ -0.69
LIN54-202ENST00000442461 RIN3Q8TB24 985 aa10.76□□□□□ -0.69
LIN54-202ENST00000442461 HPS5Q9UPZ3 1129 aa10.76□□□□□ -0.69
LIN54-202ENST00000442461 INPP5FQ9Y2H2 1132 aa10.76□□□□□ -0.69
LIN54-202ENST00000442461 SPEF1Q9Y4P9 236 aa10.76□□□□□ -0.69
LIN54-202ENST00000442461 AP4B1Q9Y6B7 739 aa10.76□□□□□ -0.69
LIN54-202ENST00000442461 PNMA8CA0A1B0GUJ8 204 aa10.76□□□□□ -0.69
LIN54-202ENST00000442461 F8W031 263 aaPredicted RBP10.76□□□□□ -0.69
LIN54-202ENST00000442461 VWA5AO00534 786 aa10.76□□□□□ -0.69
LIN54-202ENST00000442461 ZBTB39O15060 712 aa10.76□□□□□ -0.69
LIN54-202ENST00000442461 PEX1O43933 1283 aa10.76□□□□□ -0.69
LIN54-202ENST00000442461 GUCY1B2O75343 617 aa10.76□□□□□ -0.69
LIN54-202ENST00000442461 SEMA3DO95025 777 aa10.76□□□□□ -0.69
LIN54-202ENST00000442461 PROCP04070 461 aa10.76□□□□□ -0.69
LIN54-202ENST00000442461 OSBPP22059 807 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms