RNA–Protein interactions for RNA: ENST00000441867.5

ABCF1-203, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 5

Gene ABCF1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-203ENST00000441867 ZNF396Q96N95 335 aaPredicted RBP10.08□□□□□ -0.8
ABCF1-203ENST00000441867 CXCL16Q9H2A7 254 aa10.08□□□□□ -0.8
ABCF1-203ENST00000441867 SLC32A1Q9H598 525 aa10.08□□□□□ -0.8
ABCF1-203ENST00000441867 GTSE1Q9NYZ3 720 aa10.08□□□□□ -0.8
ABCF1-203ENST00000441867 EBF1Q9UH73 591 aa10.08□□□□□ -0.8
ABCF1-203ENST00000441867 RCOR1Q9UKL0 485 aa10.08□□□□□ -0.8
ABCF1-203ENST00000441867 ASB3Q9Y575 518 aa10.08□□□□□ -0.8
ABCF1-203ENST00000441867 NUB1Q9Y5A7 615 aa10.08□□□□□ -0.8
ABCF1-203ENST00000441867 NCANO14594 1321 aa10.07□□□□□ -0.8
ABCF1-203ENST00000441867 H0Y626 953 aa10.07□□□□□ -0.8
ABCF1-203ENST00000441867 PODXLO00592 558 aa10.07□□□□□ -0.8
ABCF1-203ENST00000441867 USO1O60763 962 aaKnown RBP10.07□□□□□ -0.8
ABCF1-203ENST00000441867 TRIM16O95361 564 aa10.07□□□□□ -0.8
ABCF1-203ENST00000441867 APBB3O95704 486 aa10.07□□□□□ -0.8
ABCF1-203ENST00000441867 TOP3BO95985 862 aaKnown RBP10.07□□□□□ -0.8
ABCF1-203ENST00000441867 CPB1P15086 417 aa10.07□□□□□ -0.8
ABCF1-203ENST00000441867 PTMSP20962 102 aa10.07□□□□□ -0.8
ABCF1-203ENST00000441867 TRAPPC10P48553 1259 aa10.07□□□□□ -0.8
ABCF1-203ENST00000441867 TOB1P50616 345 aaPredicted RBP10.07□□□□□ -0.8
ABCF1-203ENST00000441867 PPP2R5AQ15172 486 aa10.07□□□□□ -0.8
ABCF1-203ENST00000441867 ARHGAP15Q53QZ3 475 aa10.07□□□□□ -0.8
ABCF1-203ENST00000441867 RILPL1Q5EBL4 403 aa10.07□□□□□ -0.8
ABCF1-203ENST00000441867 TMEM196Q5HYL7 178 aa10.07□□□□□ -0.8
ABCF1-203ENST00000441867 TTC8Q8TAM2 541 aa10.07□□□□□ -0.8
ABCF1-203ENST00000441867 DEPTORQ8TB45 409 aa10.07□□□□□ -0.8
ABCF1-203ENST00000441867 BPIFB1Q8TDL5 484 aa10.07□□□□□ -0.8
ABCF1-203ENST00000441867 SUSD3Q96L08 255 aa10.07□□□□□ -0.8
ABCF1-203ENST00000441867 SCAND2PQ9GZW5 306 aaPredicted RBP10.07□□□□□ -0.8
ABCF1-203ENST00000441867 ANKFY1Q9P2R3 1169 aa10.07□□□□□ -0.8
ABCF1-203ENST00000441867 ZMYM5Q9UJ78 669 aa10.07□□□□□ -0.8
ABCF1-203ENST00000441867 PCDHA12Q9UN75 941 aa10.07□□□□□ -0.8
ABCF1-203ENST00000441867 YIPF1Q9Y548 306 aa10.07□□□□□ -0.8
ABCF1-203ENST00000441867 GREB1Q4ZG55 1949 aa10.06□□□□□ -0.8
ABCF1-203ENST00000441867 TTLL13PA6NNM8 815 aa10.06□□□□□ -0.8
ABCF1-203ENST00000441867 TRDMT1O14717 391 aaKnown RBP10.06□□□□□ -0.8
ABCF1-203ENST00000441867 CD44P16070 742 aaKnown RBP10.06□□□□□ -0.8
ABCF1-203ENST00000441867 ATP2B1P20020 1258 aa10.06□□□□□ -0.8
ABCF1-203ENST00000441867 DRD1P21728 446 aa10.06□□□□□ -0.8
ABCF1-203ENST00000441867 MARCKSP29966 332 aaPredicted RBP10.06□□□□□ -0.8
ABCF1-203ENST00000441867 HOXC13P31276 330 aa10.06□□□□□ -0.8
ABCF1-203ENST00000441867 NAMPTP43490 491 aa10.06□□□□□ -0.8
ABCF1-203ENST00000441867 ALDH1A3P47895 512 aa10.06□□□□□ -0.8
ABCF1-203ENST00000441867 NASPP49321 788 aaPredicted RBP10.06□□□□□ -0.8
ABCF1-203ENST00000441867 LMAN2Q12907 356 aa10.06□□□□□ -0.8
ABCF1-203ENST00000441867 GNL2Q13823 731 aaKnown RBP10.06□□□□□ -0.8
ABCF1-203ENST00000441867 FBXO43Q4G163 708 aa10.06□□□□□ -0.8
ABCF1-203ENST00000441867 XKR4Q5GH76 650 aa10.06□□□□□ -0.8
ABCF1-203ENST00000441867 EARS2Q5JPH6 523 aaKnown RBP10.06□□□□□ -0.8
ABCF1-203ENST00000441867 ATF7IP2Q5U623 682 aa10.06□□□□□ -0.8
ABCF1-203ENST00000441867 EEF1DP3Q658K8 133 aa10.06□□□□□ -0.8
ABCF1-203ENST00000441867 PKN3Q6P5Z2 889 aa10.06□□□□□ -0.8
ABCF1-203ENST00000441867 MAEAQ7L5Y9 396 aa10.06□□□□□ -0.8
ABCF1-203ENST00000441867 ITIH5Q86UX2 942 aa10.06□□□□□ -0.8
ABCF1-203ENST00000441867 TMC8Q8IU68 726 aa10.06□□□□□ -0.8
ABCF1-203ENST00000441867 BEST2Q8NFU1 509 aa10.06□□□□□ -0.8
ABCF1-203ENST00000441867 CCDC26Q8TAB7 109 aa10.06□□□□□ -0.8
ABCF1-203ENST00000441867 PIGOQ8TEQ8 1089 aa10.06□□□□□ -0.8
ABCF1-203ENST00000441867 ZFYVE19Q96K21 471 aa10.06□□□□□ -0.8
ABCF1-203ENST00000441867 LRRC3BQ96PB8 259 aa10.06□□□□□ -0.8
ABCF1-203ENST00000441867 NACC1Q96RE7 527 aa10.06□□□□□ -0.8
ABCF1-203ENST00000441867 USP28Q96RU2 1077 aa10.06□□□□□ -0.8
ABCF1-203ENST00000441867 CCDC94Q9BW85 323 aaPredicted RBP10.06□□□□□ -0.8
ABCF1-203ENST00000441867 LRRC3Q9BY71 257 aa10.06□□□□□ -0.8
ABCF1-203ENST00000441867 CCDC113Q9H0I3 377 aa10.06□□□□□ -0.8
ABCF1-203ENST00000441867 GOLGA2P5Q9HBQ8 144 aa10.06□□□□□ -0.8
ABCF1-203ENST00000441867 GPRC5CQ9NQ84 441 aa10.06□□□□□ -0.8
ABCF1-203ENST00000441867 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.06□□□□□ -0.8
ABCF1-203ENST00000441867 LMBRD1Q9NUN5 540 aa10.06□□□□□ -0.8
ABCF1-203ENST00000441867 TFIP11Q9UBB9 837 aaKnown RBP10.06□□□□□ -0.8
ABCF1-203ENST00000441867 LOC400499M0QZD8 3231 aa10.06□□□□□ -0.8
ABCF1-203ENST00000441867 SPAG17Q6Q759 2223 aa10.06□□□□□ -0.8
ABCF1-203ENST00000441867 KALRNO60229 2985 aa10.05□□□□□ -0.8
ABCF1-203ENST00000441867 COL4A2P08572 1712 aa10.05□□□□□ -0.8
ABCF1-203ENST00000441867 CACNA1EQ15878 2313 aa10.05□□□□□ -0.8
ABCF1-203ENST00000441867 FAM221BA6H8Z2 402 aa10.05□□□□□ -0.8
ABCF1-203ENST00000441867 GOLGA6L22H0YM25 854 aa10.05□□□□□ -0.8
ABCF1-203ENST00000441867 CDX4O14627 284 aaPredicted RBP10.05□□□□□ -0.8
ABCF1-203ENST00000441867 HYAL3O43820 417 aaPredicted RBP10.05□□□□□ -0.8
ABCF1-203ENST00000441867 YEATS4O95619 227 aa10.05□□□□□ -0.8
ABCF1-203ENST00000441867 KCNE1P15382 129 aa10.05□□□□□ -0.8
ABCF1-203ENST00000441867 LIG1P18858 919 aa10.05□□□□□ -0.8
ABCF1-203ENST00000441867 GBP1P32455 592 aa10.05□□□□□ -0.8
ABCF1-203ENST00000441867 GRM5P41594 1212 aa10.05□□□□□ -0.8
ABCF1-203ENST00000441867 SOX4Q06945 474 aaPredicted RBP10.05□□□□□ -0.8
ABCF1-203ENST00000441867 TNK2Q07912 1038 aa10.05□□□□□ -0.8
ABCF1-203ENST00000441867 SLC39A14Q15043 492 aa10.05□□□□□ -0.8
ABCF1-203ENST00000441867 USP39Q53GS9 565 aaKnown RBP10.05□□□□□ -0.8
ABCF1-203ENST00000441867 FSTL4Q6MZW2 842 aa10.05□□□□□ -0.8
ABCF1-203ENST00000441867 ALKAL1Q6UXT8 129 aa10.05□□□□□ -0.8
ABCF1-203ENST00000441867 RNF19BQ6ZMZ0 732 aa10.05□□□□□ -0.8
ABCF1-203ENST00000441867 SYT13Q7L8C5 426 aa10.05□□□□□ -0.8
ABCF1-203ENST00000441867 CYP2U1Q7Z449 544 aa10.05□□□□□ -0.8
ABCF1-203ENST00000441867 LINC00301Q8NCQ3 95 aa10.05□□□□□ -0.8
ABCF1-203ENST00000441867 DEFB124Q8NES8 71 aa10.05□□□□□ -0.8
ABCF1-203ENST00000441867 ACDQ96AP0 544 aa10.05□□□□□ -0.8
ABCF1-203ENST00000441867 GCNAQ96QF7 691 aa10.05□□□□□ -0.8
ABCF1-203ENST00000441867 ATXN3LQ9H3M9 355 aa10.05□□□□□ -0.8
ABCF1-203ENST00000441867 NAV2Q8IVL1 2488 aa10.05□□□□□ -0.8
ABCF1-203ENST00000441867 FAM205CA6NFA0 338 aa10.04□□□□□ -0.8
ABCF1-203ENST00000441867 OR6C75A6NL08 312 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms