RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 ATP11BQ9Y2G3 1177 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 ALKQ9UM73 1620 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 A0A1W2PP64 1363 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 ABCC11Q96J66 1382 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 ZNF561-AS1K7EIQ3 104 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 UBXN8O00124 270 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 EIF3FO00303 357 aaPredicted RBP6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 ADAMTS3O15072 1205 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 CEP104O60308 925 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 SLITRK5O94991 958 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 CSTBP04080 98 aaKnown RBP6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 DHRS4L1P0CG22 281 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 ADH5P11766 374 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 ATP5OP48047 213 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 STARD3Q14849 445 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 BOLA3Q53S33 107 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 C11orf88Q6PI97 169 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 LURAP1LQ8IV03 231 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 WDR63Q8IWG1 891 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 SYTL1Q8IYJ3 562 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 IL17RDQ8NFM7 739 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 GPT2Q8TD30 523 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 ZSCAN31Q96LW9 406 aaPredicted RBP6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 SMURF1Q9HCE7 757 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 CYP4F12Q9HCS2 524 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 DCP1AQ9NPI6 582 aaPredicted RBP6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 ACSS2Q9NR19 701 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 DDX18Q9NVP1 670 aaKnown RBP6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 PCOLCE2Q9UKZ9 415 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 SSX2IPQ9Y2D8 614 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 PCDHGB2Q9Y5G2 931 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 CYP2D7A0A087X1C5 515 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 SGK1O00141 431 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 BCAR3O75815 825 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 CSPG5O95196 566 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 YEATS4O95619 227 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 STARD3NLO95772 234 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 IVLP07476 585 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 MYF5P13349 255 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 HSD17B2P37059 387 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 ASPAP45381 313 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 POSTNQ15063 836 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 UGT8Q16880 541 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 PROSER3Q2NL68 480 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 MAJINQ3KP22 176 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 CT83Q5H943 113 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 ANGEL2Q5VTE6 544 aaKnown RBP6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 EEF1DP3Q658K8 133 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 NUP54Q7Z3B4 507 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 GALNT6Q8NCL4 622 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 CCHCR1Q8TD31 782 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 DENND1AQ8TEH3 1009 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 FATE1Q969F0 183 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 EAF2Q96CJ1 260 aaPredicted RBP6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 COG3Q96JB2 828 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 C8orf76Q96K31 380 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 C16orf45Q96MC5 204 aaPredicted RBP6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 TTLL2Q9BWV7 592 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 BTBD1Q9H0C5 482 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 UBN1Q9NPG3 1134 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 MOSPD1Q9UJG1 213 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 C19orf53Q9UNZ5 99 aaPredicted RBP6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 PCDHGB5Q9Y5G0 923 aa6.31□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 NPHP3-ACAD11A0A0J9YXS1 232 aa6.3□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 CDC14CA4D256 554 aa6.3□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 KCNK3O14649 394 aa6.3□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 CAPN9O14815 690 aa6.3□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 TSPAN3O60637 253 aa6.3□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 ADCY5O95622 1261 aa6.3□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 AVPP01185 164 aa6.3□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 TMEM11P17152 192 aa6.3□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 PAMP19021 973 aa6.3□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 S100A5P33763 92 aa6.3□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 CTSKP43235 329 aa6.3□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 CEBPAP49715 358 aaPredicted RBP6.3□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 DRG2P55039 364 aaKnown RBP6.3□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 NLRP5P59047 1200 aa6.3□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 ITIH3Q06033 890 aa6.3□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.3□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 DUOXA2Q1HG44 320 aa6.3□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 KRT71Q3SY84 523 aa6.3□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 SH2D4BQ5SQS7 431 aa6.3□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 SFMBT2Q5VUG0 894 aa6.3□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 HHIPL2Q6UWX4 724 aa6.3□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 C20orf204Q6ZNR8 217 aa6.3□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 KCNK18Q7Z418 384 aa6.3□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 HEATR4Q86WZ0 1026 aa6.3□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 SLC7A5P1Q8MH63 180 aa6.3□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 NEK11Q8NG66 645 aa6.3□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 GOT1L1Q8NHS2 421 aaPredicted RBP6.3□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 ACMSDQ8TDX5 336 aa6.3□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 CHFRQ96EP1 664 aa6.3□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 NRBF2Q96F24 287 aa6.3□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 TMEM41AQ96HV5 264 aa6.3□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 VPS39Q96JC1 886 aa6.3□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 CDK19Q9BWU1 502 aa6.3□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 ANO3Q9BYT9 981 aa6.3□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 TXLNGYQ9BZA5 131 aa6.3□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 VCX3BQ9H321 246 aa6.3□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 SEMA4AQ9H3S1 761 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms