RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 DNAJC25-GNG10A0A024R161 153 aa11.15□□□□□ -0.62
SYNE2-206ENST00000441438 IQANK1A0A1B0GTG1 560 aa11.15□□□□□ -0.62
SYNE2-206ENST00000441438 LOC105371267A0A1B0GV96 52 aa11.15□□□□□ -0.62
SYNE2-206ENST00000441438 NPTXRO95502 500 aa11.15□□□□□ -0.62
SYNE2-206ENST00000441438 CPEP16870 476 aa11.15□□□□□ -0.62
SYNE2-206ENST00000441438 TTKP33981 857 aa11.15□□□□□ -0.62
SYNE2-206ENST00000441438 TNFAIP2Q03169 654 aa11.15□□□□□ -0.62
SYNE2-206ENST00000441438 EFTUD2Q15029 972 aaKnown RBP eCLIP11.15□□□□□ -0.62
SYNE2-206ENST00000441438 ODF2Q5BJF6 829 aa11.15□□□□□ -0.62
SYNE2-206ENST00000441438 ZBTB41Q5SVQ8 909 aa11.15□□□□□ -0.62
SYNE2-206ENST00000441438 SULT6B1Q6IMI4 303 aa11.15□□□□□ -0.62
SYNE2-206ENST00000441438 KRT27Q7Z3Y8 459 aa11.15□□□□□ -0.62
SYNE2-206ENST00000441438 FAM160B2Q86V87 743 aa11.15□□□□□ -0.62
SYNE2-206ENST00000441438 PLD6Q8N2A8 252 aaKnown RBP11.15□□□□□ -0.62
SYNE2-206ENST00000441438 MFSD2AQ8NA29 543 aa11.15□□□□□ -0.62
SYNE2-206ENST00000441438 GMCL1P1Q8NEA9 526 aa11.15□□□□□ -0.62
SYNE2-206ENST00000441438 PPP2R3CQ969Q6 453 aa11.15□□□□□ -0.62
SYNE2-206ENST00000441438 ZNF566Q969W8 418 aa11.15□□□□□ -0.62
SYNE2-206ENST00000441438 NR1H4Q96RI1 486 aaPredicted RBP11.15□□□□□ -0.62
SYNE2-206ENST00000441438 PAIP1Q9H074 479 aaKnown RBP11.15□□□□□ -0.62
SYNE2-206ENST00000441438 ATAD3AQ9NVI7 634 aa11.15□□□□□ -0.62
SYNE2-206ENST00000441438 BZW2Q9Y6E2 419 aaKnown RBP11.15□□□□□ -0.62
SYNE2-206ENST00000441438 B2RBV5 119 aa11.15□□□□□ -0.62
SYNE2-206ENST00000441438 CBFA2T3O75081 653 aa11.15□□□□□ -0.62
SYNE2-206ENST00000441438 IL11P20809 199 aa11.15□□□□□ -0.62
SYNE2-206ENST00000441438 KCNAB2Q13303 367 aa11.15□□□□□ -0.62
SYNE2-206ENST00000441438 COTL1Q14019 142 aa11.15□□□□□ -0.62
SYNE2-206ENST00000441438 PTK2BQ14289 1009 aa11.15□□□□□ -0.62
SYNE2-206ENST00000441438 PFKFB3Q16875 520 aaPredicted RBP11.15□□□□□ -0.62
SYNE2-206ENST00000441438 FAM209AQ5JX71 171 aa11.15□□□□□ -0.62
SYNE2-206ENST00000441438 CYP4A22Q5TCH4 519 aa11.15□□□□□ -0.62
SYNE2-206ENST00000441438 SEZ6L2Q6UXD5 910 aa11.15□□□□□ -0.62
SYNE2-206ENST00000441438 OR2C3Q8N628 320 aa11.15□□□□□ -0.62
SYNE2-206ENST00000441438 TRIM47Q96LD4 638 aa11.15□□□□□ -0.62
SYNE2-206ENST00000441438 XKR8Q9H6D3 395 aa11.15□□□□□ -0.62
SYNE2-206ENST00000441438 FANCEQ9HB96 536 aa11.15□□□□□ -0.62
SYNE2-206ENST00000441438 GRHPRQ9UBQ7 328 aa11.15□□□□□ -0.62
SYNE2-206ENST00000441438 LCMT1Q9UIC8 334 aa11.15□□□□□ -0.62
SYNE2-206ENST00000441438 PSME2Q9UL46 239 aa11.15□□□□□ -0.62
SYNE2-206ENST00000441438 EXOC6BQ9Y2D4 811 aa11.15□□□□□ -0.62
SYNE2-206ENST00000441438 USP20Q9Y2K6 914 aa11.15□□□□□ -0.62
SYNE2-206ENST00000441438 KDM3BQ7LBC6 1761 aa11.15□□□□□ -0.62
SYNE2-206ENST00000441438 KIAA0232Q92628 1395 aa11.15□□□□□ -0.63
SYNE2-206ENST00000441438 A0A087WV62 115 aa11.15□□□□□ -0.63
SYNE2-206ENST00000441438 FZD9O00144 591 aa11.15□□□□□ -0.63
SYNE2-206ENST00000441438 PRKACBP22694 351 aa11.15□□□□□ -0.63
SYNE2-206ENST00000441438 TAGLN2P37802 199 aaKnown RBP11.15□□□□□ -0.63
SYNE2-206ENST00000441438 CBX3Q13185 183 aa11.15□□□□□ -0.63
SYNE2-206ENST00000441438 CUL1Q13616 776 aa11.15□□□□□ -0.63
SYNE2-206ENST00000441438 OGFOD3Q6PK18 319 aa11.15□□□□□ -0.63
SYNE2-206ENST00000441438 PI16Q6UXB8 463 aa11.15□□□□□ -0.63
SYNE2-206ENST00000441438 MARK2Q7KZI7 788 aaKnown RBP11.15□□□□□ -0.63
SYNE2-206ENST00000441438 PIWIL3Q7Z3Z3 882 aaKnown RBP11.15□□□□□ -0.63
SYNE2-206ENST00000441438 MICALL2Q8IY33 904 aa11.15□□□□□ -0.63
SYNE2-206ENST00000441438 TXLNBQ8N3L3 684 aa11.15□□□□□ -0.63
SYNE2-206ENST00000441438 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.15□□□□□ -0.63
SYNE2-206ENST00000441438 RIPOR3Q96MK2 946 aa11.15□□□□□ -0.63
SYNE2-206ENST00000441438 CDK5RAP1Q96SZ6 601 aaKnown RBP11.15□□□□□ -0.63
SYNE2-206ENST00000441438 SPEF1Q9Y4P9 236 aa11.15□□□□□ -0.63
SYNE2-206ENST00000441438 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.15□□□□□ -0.63
SYNE2-206ENST00000441438 CYP3A7-CYP3A51PA0A087WV96 503 aa11.14□□□□□ -0.63
SYNE2-206ENST00000441438 GOLGA8IPA6NC78 632 aa11.14□□□□□ -0.63
SYNE2-206ENST00000441438 GOLGA8JA6NMD2 632 aa11.14□□□□□ -0.63
SYNE2-206ENST00000441438 GOLGA8TH3BQL2 631 aa11.14□□□□□ -0.63
SYNE2-206ENST00000441438 GOLGA8HP0CJ92 632 aa11.14□□□□□ -0.63
SYNE2-206ENST00000441438 APEHP13798 732 aaKnown RBP11.14□□□□□ -0.63
SYNE2-206ENST00000441438 PORP16435 677 aaPredicted RBP11.14□□□□□ -0.63
SYNE2-206ENST00000441438 CYP3A7P24462 503 aa11.14□□□□□ -0.63
SYNE2-206ENST00000441438 DHPSP49366 369 aaPredicted RBP11.14□□□□□ -0.63
SYNE2-206ENST00000441438 TUBA4AP68366 448 aa11.14□□□□□ -0.63
SYNE2-206ENST00000441438 PCBP1Q15365 356 aaKnown RBP eCLIP11.14□□□□□ -0.63
SYNE2-206ENST00000441438 PCBP2Q15366 365 aaKnown RBP eCLIP11.14□□□□□ -0.63
SYNE2-206ENST00000441438 TWISTNBQ3B726 338 aaPredicted RBP11.14□□□□□ -0.63
SYNE2-206ENST00000441438 PKN3Q6P5Z2 889 aa11.14□□□□□ -0.63
SYNE2-206ENST00000441438 GPR142Q7Z601 462 aa11.14□□□□□ -0.63
SYNE2-206ENST00000441438 TXNRD3Q86VQ6 643 aa11.14□□□□□ -0.63
SYNE2-206ENST00000441438 LRRC34Q8IZ02 419 aa11.14□□□□□ -0.63
SYNE2-206ENST00000441438 CARFQ8N187 725 aa11.14□□□□□ -0.63
SYNE2-206ENST00000441438 FAM156AQ8NDB6 213 aa11.14□□□□□ -0.63
SYNE2-206ENST00000441438 CGREF1Q99674 301 aa11.14□□□□□ -0.63
SYNE2-206ENST00000441438 KIFC3Q9BVG8 833 aa11.14□□□□□ -0.63
SYNE2-206ENST00000441438 KRT23Q9C075 422 aa11.14□□□□□ -0.63
SYNE2-206ENST00000441438 ZBTB3Q9H5J0 574 aa11.14□□□□□ -0.63
SYNE2-206ENST00000441438 ARFGAP3Q9NP61 516 aa11.14□□□□□ -0.63
SYNE2-206ENST00000441438 WASH6PQ9NQA3 447 aa11.14□□□□□ -0.63
SYNE2-206ENST00000441438 ATP8B3O60423 1300 aa11.14□□□□□ -0.63
SYNE2-206ENST00000441438 SPATA31A1Q5TZJ5 1347 aa11.14□□□□□ -0.63
SYNE2-206ENST00000441438 C15orf38-AP3S2A0A0A6YYH1 394 aa11.14□□□□□ -0.63
SYNE2-206ENST00000441438 A0A1B0GUA9 196 aa11.14□□□□□ -0.63
SYNE2-206ENST00000441438 DCAF8L1A6NGE4 600 aa11.14□□□□□ -0.63
SYNE2-206ENST00000441438 PQBP1O60828 265 aaKnown RBP11.14□□□□□ -0.63
SYNE2-206ENST00000441438 ZPR1O75312 459 aa11.14□□□□□ -0.63
SYNE2-206ENST00000441438 MT-CO1P00395 513 aa11.14□□□□□ -0.63
SYNE2-206ENST00000441438 HLA-DRAP01903 254 aa11.14□□□□□ -0.63
SYNE2-206ENST00000441438 COL9A1P20849 921 aa11.14□□□□□ -0.63
SYNE2-206ENST00000441438 LONP1P36776 959 aaKnown RBP11.14□□□□□ -0.63
SYNE2-206ENST00000441438 HTR2BP41595 481 aa11.14□□□□□ -0.63
SYNE2-206ENST00000441438 PCP4P48539 62 aa11.14□□□□□ -0.63
SYNE2-206ENST00000441438 HNRNPDQ14103 355 aaKnown RBP11.14□□□□□ -0.63
SYNE2-206ENST00000441438 GALNT3Q14435 633 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms