RNA–Protein interactions for RNA: ENST00000440978.1

EBF3-203, Transcript of early B cell factor 3, humanhuman

TSL 3

Gene EBF3, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-203ENST00000440978 KCNC3Q14003 757 aa12.79□□□□□ -0.36
EBF3-203ENST00000440978 RAB33AQ14088 237 aa12.79□□□□□ -0.36
EBF3-203ENST00000440978 NCAPHQ15003 741 aa12.79□□□□□ -0.36
EBF3-203ENST00000440978 CCDC85BQ15834 202 aaPredicted RBP12.79□□□□□ -0.36
EBF3-203ENST00000440978 SOWAHAQ2M3V2 549 aa12.79□□□□□ -0.36
EBF3-203ENST00000440978 CTC1Q2NKJ3 1217 aa12.79□□□□□ -0.36
EBF3-203ENST00000440978 TCP11X2Q5H9J9 407 aa12.79□□□□□ -0.36
EBF3-203ENST00000440978 WDR44Q5JSH3 913 aa12.79□□□□□ -0.36
EBF3-203ENST00000440978 WSCD1Q658N2 575 aa12.79□□□□□ -0.36
EBF3-203ENST00000440978 TMEM184AQ6ZMB5 413 aa12.79□□□□□ -0.36
EBF3-203ENST00000440978 CREBRFQ8IUR6 639 aa12.79□□□□□ -0.36
EBF3-203ENST00000440978 ADGRF2Q8IZF7 708 aa12.79□□□□□ -0.36
EBF3-203ENST00000440978 AOPEPQ8N6M6 819 aa12.79□□□□□ -0.36
EBF3-203ENST00000440978 ANKRD20A12PQ8NF67 263 aa12.79□□□□□ -0.36
EBF3-203ENST00000440978 CASP10Q92851 521 aa12.79□□□□□ -0.36
EBF3-203ENST00000440978 TUBGCP2Q9BSJ2 902 aa12.79□□□□□ -0.36
EBF3-203ENST00000440978 NIF3L1Q9GZT8 377 aa12.79□□□□□ -0.36
EBF3-203ENST00000440978 FAM124BQ9H5Z6 455 aaPredicted RBP12.79□□□□□ -0.36
EBF3-203ENST00000440978 IGFLR1Q9H665 355 aa12.79□□□□□ -0.36
EBF3-203ENST00000440978 FANCLQ9NW38 375 aa12.79□□□□□ -0.36
EBF3-203ENST00000440978 NXF1Q9UBU9 619 aaKnown RBP12.79□□□□□ -0.36
EBF3-203ENST00000440978 MAFFQ9ULX9 164 aa12.79□□□□□ -0.36
EBF3-203ENST00000440978 COG5Q9UP83 839 aa12.79□□□□□ -0.36
EBF3-203ENST00000440978 HCFC2Q9Y5Z7 792 aa12.79□□□□□ -0.36
EBF3-203ENST00000440978 GTPBP10A4D1E9 387 aaKnown RBP12.78□□□□□ -0.36
EBF3-203ENST00000440978 BECN2A8MW95 431 aa12.78□□□□□ -0.36
EBF3-203ENST00000440978 GABRDO14764 452 aa12.78□□□□□ -0.36
EBF3-203ENST00000440978 GLUD1P00367 558 aa12.78□□□□□ -0.36
EBF3-203ENST00000440978 TPM2P07951 284 aa12.78□□□□□ -0.36
EBF3-203ENST00000440978 RPL17P18621 184 aaKnown RBP12.78□□□□□ -0.36
EBF3-203ENST00000440978 WARSP23381 471 aaKnown RBP12.78□□□□□ -0.36
EBF3-203ENST00000440978 PCSK1P29120 753 aa12.78□□□□□ -0.36
EBF3-203ENST00000440978 NOP14P78316 857 aaKnown RBP12.78□□□□□ -0.36
EBF3-203ENST00000440978 ROR1Q01973 937 aa12.78□□□□□ -0.36
EBF3-203ENST00000440978 SMARCB1Q12824 385 aa12.78□□□□□ -0.36
EBF3-203ENST00000440978 TPGS2Q68CL5 300 aa12.78□□□□□ -0.36
EBF3-203ENST00000440978 LRSAM1Q6UWE0 723 aa12.78□□□□□ -0.36
EBF3-203ENST00000440978 TTC39CQ8N584 583 aa12.78□□□□□ -0.36
EBF3-203ENST00000440978 ZNF461Q8TAF7 563 aa12.78□□□□□ -0.36
EBF3-203ENST00000440978 SLC22A17Q8WUG5 538 aa12.78□□□□□ -0.36
EBF3-203ENST00000440978 PPM1EQ8WY54 764 aa12.78□□□□□ -0.36
EBF3-203ENST00000440978 ACBD6Q9BR61 282 aa12.78□□□□□ -0.36
EBF3-203ENST00000440978 PLEKHA4Q9H4M7 779 aa12.78□□□□□ -0.36
EBF3-203ENST00000440978 DZANK1Q9NVP4 752 aa12.78□□□□□ -0.36
EBF3-203ENST00000440978 MYO7AQ13402 2215 aa12.77□□□□□ -0.36
EBF3-203ENST00000440978 TGM5O43548 720 aa12.77□□□□□ -0.37
EBF3-203ENST00000440978 ABLIM3O94929 683 aa12.77□□□□□ -0.37
EBF3-203ENST00000440978 CPB1P15086 417 aa12.77□□□□□ -0.37
EBF3-203ENST00000440978 ZNF18P17022 549 aa12.77□□□□□ -0.37
EBF3-203ENST00000440978 GTF2F1P35269 517 aaKnown RBP eCLIP12.77□□□□□ -0.37
EBF3-203ENST00000440978 ASPAP45381 313 aa12.77□□□□□ -0.37
EBF3-203ENST00000440978 TPM4P67936 248 aa12.77□□□□□ -0.37
EBF3-203ENST00000440978 TSPY1Q01534 308 aa12.77□□□□□ -0.37
EBF3-203ENST00000440978 GPR17Q13304 367 aa12.77□□□□□ -0.37
EBF3-203ENST00000440978 IQCB1Q15051 598 aa12.77□□□□□ -0.37
EBF3-203ENST00000440978 SKIV2LQ15477 1246 aaKnown RBP12.77□□□□□ -0.37
EBF3-203ENST00000440978 VWA3BQ502W6 1294 aa12.77□□□□□ -0.37
EBF3-203ENST00000440978 HSP90AA4PQ58FG1 418 aa12.77□□□□□ -0.37
EBF3-203ENST00000440978 LILRA6Q6PI73 481 aa12.77□□□□□ -0.37
EBF3-203ENST00000440978 RSPO2Q6UXX9 243 aaPredicted RBP12.77□□□□□ -0.37
EBF3-203ENST00000440978 RTL10Q7L3V2 364 aa12.77□□□□□ -0.37
EBF3-203ENST00000440978 PALB2Q86YC2 1186 aa12.77□□□□□ -0.37
EBF3-203ENST00000440978 GLYCTKQ8IVS8 523 aa12.77□□□□□ -0.37
EBF3-203ENST00000440978 DHX40Q8IX18 779 aaKnown RBP12.77□□□□□ -0.37
EBF3-203ENST00000440978 DCP1BQ8IZD4 617 aaKnown RBP12.77□□□□□ -0.37
EBF3-203ENST00000440978 EHBP1Q8NDI1 1231 aa12.77□□□□□ -0.37
EBF3-203ENST00000440978 KBTBD7Q8WVZ9 684 aa12.77□□□□□ -0.37
EBF3-203ENST00000440978 SEMA4DQ92854 862 aa12.77□□□□□ -0.37
EBF3-203ENST00000440978 HLA-CQ95604 372 aa12.77□□□□□ -0.37
EBF3-203ENST00000440978 RTP3Q9BQQ7 232 aa12.77□□□□□ -0.37
EBF3-203ENST00000440978 PI4K2AQ9BTU6 479 aa12.77□□□□□ -0.37
EBF3-203ENST00000440978 BCO2Q9BYV7 579 aa12.77□□□□□ -0.37
EBF3-203ENST00000440978 DNAI2Q9GZS0 605 aa12.77□□□□□ -0.37
EBF3-203ENST00000440978 SNX25Q9H3E2 840 aa12.77□□□□□ -0.37
EBF3-203ENST00000440978 NDST4Q9H3R1 872 aa12.77□□□□□ -0.37
EBF3-203ENST00000440978 CYP3A43Q9HB55 503 aa12.77□□□□□ -0.37
EBF3-203ENST00000440978 DDX43Q9NXZ2 648 aaKnown RBP12.77□□□□□ -0.37
EBF3-203ENST00000440978 CLDND1Q9NY35 253 aa12.77□□□□□ -0.37
EBF3-203ENST00000440978 FARP1Q9Y4F1 1045 aaPredicted RBP12.77□□□□□ -0.37
EBF3-203ENST00000440978 PRUNE2Q8WUY3 3088 aa12.77□□□□□ -0.37
EBF3-203ENST00000440978 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.76□□□□□ -0.37
EBF3-203ENST00000440978 WDR27A2RRH5 827 aa12.76□□□□□ -0.37
EBF3-203ENST00000440978 LRRC10BA6NIK2 292 aa12.76□□□□□ -0.37
EBF3-203ENST00000440978 LINC01565O15544 149 aa12.76□□□□□ -0.37
EBF3-203ENST00000440978 ADAM12O43184 909 aa12.76□□□□□ -0.37
EBF3-203ENST00000440978 GLP2RO95838 553 aa12.76□□□□□ -0.37
EBF3-203ENST00000440978 ATF2P15336 505 aa12.76□□□□□ -0.37
EBF3-203ENST00000440978 EPCAMP16422 314 aa12.76□□□□□ -0.37
EBF3-203ENST00000440978 HOXB8P17481 243 aaPredicted RBP12.76□□□□□ -0.37
EBF3-203ENST00000440978 TRIM21P19474 475 aaKnown RBP12.76□□□□□ -0.37
EBF3-203ENST00000440978 CDK11BP21127 795 aaKnown RBP12.76□□□□□ -0.37
EBF3-203ENST00000440978 TBXAS1P24557 533 aaPredicted RBP12.76□□□□□ -0.37
EBF3-203ENST00000440978 GNL1P36915 607 aaPredicted RBP12.76□□□□□ -0.37
EBF3-203ENST00000440978 ZNF445P59923 1031 aa12.76□□□□□ -0.37
EBF3-203ENST00000440978 MIIPQ5JXC2 388 aa12.76□□□□□ -0.37
EBF3-203ENST00000440978 SPOPLQ6IQ16 392 aa12.76□□□□□ -0.37
EBF3-203ENST00000440978 LLGL2Q6P1M3 1020 aa12.76□□□□□ -0.37
EBF3-203ENST00000440978 GBP6Q6ZN66 633 aa12.76□□□□□ -0.37
EBF3-203ENST00000440978 UNC93AQ86WB7 457 aa12.76□□□□□ -0.37
EBF3-203ENST00000440978 VN1R2Q8NFZ6 395 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms