RNA–Protein interactions for RNA: ENST00000439984.7

PCNX1-202, Transcript of pecanex 1, humanhuman

TSL 1 (best) BASIC

Gene PCNX1, Length 6,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-202ENST00000439984 PYGMP11217 842 aa15.33■□□□□ 0.04
PCNX1-202ENST00000439984 ZFRQ96KR1 1074 aaKnown RBP15.33■□□□□ 0.04
PCNX1-202ENST00000439984 A8MXQ7 604 aa15.33■□□□□ 0.04
PCNX1-202ENST00000439984 HSPA1AP0DMV8 641 aaKnown RBP15.33■□□□□ 0.04
PCNX1-202ENST00000439984 HSPA1BP0DMV9 641 aaKnown RBP15.33■□□□□ 0.04
PCNX1-202ENST00000439984 TFE3P19532 575 aaPredicted RBP15.33■□□□□ 0.04
PCNX1-202ENST00000439984 GCLCP48506 637 aaPredicted RBP15.33■□□□□ 0.04
PCNX1-202ENST00000439984 BCAR1P56945 870 aa15.33■□□□□ 0.04
PCNX1-202ENST00000439984 RIN3Q8TB24 985 aa15.33■□□□□ 0.04
PCNX1-202ENST00000439984 PAWRQ96IZ0 340 aaKnown RBP15.33■□□□□ 0.04
PCNX1-202ENST00000439984 USP1O94782 785 aa15.33■□□□□ 0.04
PCNX1-202ENST00000439984 UNC5CO95185 931 aa15.33■□□□□ 0.04
PCNX1-202ENST00000439984 PYGLP06737 847 aa15.33■□□□□ 0.04
PCNX1-202ENST00000439984 NLRP11P59045 1033 aaKnown RBP15.33■□□□□ 0.04
PCNX1-202ENST00000439984 ELOA2Q8IYF1 753 aaPredicted RBP15.33■□□□□ 0.04
PCNX1-202ENST00000439984 POU5F2Q8N7G0 328 aa15.33■□□□□ 0.04
PCNX1-202ENST00000439984 ACSF2Q96CM8 615 aaPredicted RBP15.33■□□□□ 0.04
PCNX1-202ENST00000439984 TMEM47Q9BQJ4 181 aa15.33■□□□□ 0.04
PCNX1-202ENST00000439984 TECPR2O15040 1411 aa15.33■□□□□ 0.04
PCNX1-202ENST00000439984 ADGRA3Q8IWK6 1321 aa15.33■□□□□ 0.04
PCNX1-202ENST00000439984 FCHO1O14526 889 aa15.33■□□□□ 0.04
PCNX1-202ENST00000439984 PFDN6O15212 129 aa15.33■□□□□ 0.04
PCNX1-202ENST00000439984 ATP9BO43861 1147 aa15.33■□□□□ 0.04
PCNX1-202ENST00000439984 ERMARDQ5T6L9 678 aa15.33■□□□□ 0.04
PCNX1-202ENST00000439984 HEATR6Q6AI08 1181 aaKnown RBP15.33■□□□□ 0.04
PCNX1-202ENST00000439984 OR9Q1Q8NGQ5 310 aa15.33■□□□□ 0.04
PCNX1-202ENST00000439984 GGA2Q9UJY4 613 aa15.33■□□□□ 0.04
PCNX1-202ENST00000439984 XPOTO43592 962 aaKnown RBP15.32■□□□□ 0.04
PCNX1-202ENST00000439984 PMLP29590 882 aa15.32■□□□□ 0.04
PCNX1-202ENST00000439984 CDH6P55285 790 aa15.32■□□□□ 0.04
PCNX1-202ENST00000439984 DDX56Q9NY93 547 aaKnown RBP15.32■□□□□ 0.04
PCNX1-202ENST00000439984 SLC1A1P43005 524 aa15.32■□□□□ 0.04
PCNX1-202ENST00000439984 NCKAP1LP55160 1127 aa15.32■□□□□ 0.04
PCNX1-202ENST00000439984 TRAF2Q12933 501 aa15.32■□□□□ 0.04
PCNX1-202ENST00000439984 GCOM2Q9BZD3 368 aaPredicted RBP15.32■□□□□ 0.04
PCNX1-202ENST00000439984 NBNO60934 754 aa15.32■□□□□ 0.04
PCNX1-202ENST00000439984 TMPRSS6Q8IU80 811 aa15.32■□□□□ 0.04
PCNX1-202ENST00000439984 ZSWIM1Q9BR11 485 aa15.32■□□□□ 0.04
PCNX1-202ENST00000439984 MYBP10242 640 aa15.32■□□□□ 0.04
PCNX1-202ENST00000439984 GRK2P25098 689 aa15.32■□□□□ 0.04
PCNX1-202ENST00000439984 FMO5P49326 533 aa15.32■□□□□ 0.04
PCNX1-202ENST00000439984 CCDC117Q8IWD4 279 aaPredicted RBP15.32■□□□□ 0.04
PCNX1-202ENST00000439984 SLC44A5Q8NCS7 719 aa15.32■□□□□ 0.04
PCNX1-202ENST00000439984 MSTO1Q9BUK6 570 aa15.32■□□□□ 0.04
PCNX1-202ENST00000439984 ASNSD1Q9NWL6 643 aa15.32■□□□□ 0.04
PCNX1-202ENST00000439984 KRT7P08729 469 aa15.32■□□□□ 0.04
PCNX1-202ENST00000439984 MTERF2Q49AM1 385 aa15.32■□□□□ 0.04
PCNX1-202ENST00000439984 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.32■□□□□ 0.04
PCNX1-202ENST00000439984 MROH7Q68CQ1 1323 aa15.32■□□□□ 0.04
PCNX1-202ENST00000439984 PARVAQ9NVD7 372 aa15.31■□□□□ 0.04
PCNX1-202ENST00000439984 TSR3Q9UJK0 312 aaKnown RBP15.31■□□□□ 0.04
PCNX1-202ENST00000439984 CBX3Q13185 183 aa15.31■□□□□ 0.04
PCNX1-202ENST00000439984 DGKHQ86XP1 1220 aa15.31■□□□□ 0.04
PCNX1-202ENST00000439984 RCOR2Q8IZ40 523 aa15.31■□□□□ 0.04
PCNX1-202ENST00000439984 SYN2Q92777 582 aaPredicted RBP15.31■□□□□ 0.04
PCNX1-202ENST00000439984 MYO1GB0I1T2 1018 aa15.31■□□□□ 0.04
PCNX1-202ENST00000439984 LIN7AO14910 233 aaPredicted RBP15.31■□□□□ 0.04
PCNX1-202ENST00000439984 RGS5O15539 181 aa15.31■□□□□ 0.04
PCNX1-202ENST00000439984 RPL21P46778 160 aaKnown RBP15.31■□□□□ 0.04
PCNX1-202ENST00000439984 NCALDP61601 193 aa15.31■□□□□ 0.04
PCNX1-202ENST00000439984 EPC2Q52LR7 807 aa15.31■□□□□ 0.04
PCNX1-202ENST00000439984 GIPC3Q8TF64 312 aa15.31■□□□□ 0.04
PCNX1-202ENST00000439984 DHX38Q92620 1227 aaKnown RBP15.31■□□□□ 0.04
PCNX1-202ENST00000439984 NMRK1Q9NWW6 199 aa15.31■□□□□ 0.04
PCNX1-202ENST00000439984 RRN3Q9NYV6 651 aa15.31■□□□□ 0.04
PCNX1-202ENST00000439984 UVRAGQ9P2Y5 699 aa15.31■□□□□ 0.04
PCNX1-202ENST00000439984 SAC3D1A6NKF1 404 aa15.31■□□□□ 0.04
PCNX1-202ENST00000439984 CDK8P49336 464 aa15.31■□□□□ 0.04
PCNX1-202ENST00000439984 TOB1P50616 345 aaPredicted RBP15.31■□□□□ 0.04
PCNX1-202ENST00000439984 BNC2Q6ZN30 1099 aaPredicted RBP15.31■□□□□ 0.04
PCNX1-202ENST00000439984 MSL3Q8N5Y2 521 aaKnown RBP15.31■□□□□ 0.04
PCNX1-202ENST00000439984 ABHD8Q96I13 439 aa15.31■□□□□ 0.04
PCNX1-202ENST00000439984 A1CFQ9NQ94 594 aaKnown RBP15.31■□□□□ 0.04
PCNX1-202ENST00000439984 INTS13Q9NVM9 706 aa15.31■□□□□ 0.04
PCNX1-202ENST00000439984 CEMIPQ8WUJ3 1361 aa15.31■□□□□ 0.04
PCNX1-202ENST00000439984 E9PBE3 544 aa15.31■□□□□ 0.04
PCNX1-202ENST00000439984 KLHL41O60662 606 aa15.31■□□□□ 0.04
PCNX1-202ENST00000439984 CHN2P52757 468 aa15.31■□□□□ 0.04
PCNX1-202ENST00000439984 RNF148Q8N7C7 305 aa15.31■□□□□ 0.04
PCNX1-202ENST00000439984 DHX36Q9H2U1 1008 aaKnown RBP15.31■□□□□ 0.04
PCNX1-202ENST00000439984 DNAJC16Q9Y2G8 782 aa15.31■□□□□ 0.04
PCNX1-202ENST00000439984 IVNS1ABPQ9Y6Y0 642 aa15.31■□□□□ 0.04
PCNX1-202ENST00000439984 PALLDQ8WX93 1383 aa15.31■□□□□ 0.04
PCNX1-202ENST00000439984 SUSD4Q5VX71 490 aa15.31■□□□□ 0.04
PCNX1-202ENST00000439984 RMND5BQ96G75 393 aaPredicted RBP15.31■□□□□ 0.04
PCNX1-202ENST00000439984 DNM1LO00429 736 aa15.3■□□□□ 0.04
PCNX1-202ENST00000439984 FNTAP49354 379 aa15.3■□□□□ 0.04
PCNX1-202ENST00000439984 CALML6Q8TD86 181 aa15.3■□□□□ 0.04
PCNX1-202ENST00000439984 TASP1Q9H6P5 420 aa15.3■□□□□ 0.04
PCNX1-202ENST00000439984 ZBTB49Q6ZSB9 765 aa15.3■□□□□ 0.04
PCNX1-202ENST00000439984 ZCCHC7Q8N3Z6 543 aaKnown RBP15.3■□□□□ 0.04
PCNX1-202ENST00000439984 SH3GLB1Q9Y371 365 aa15.3■□□□□ 0.04
PCNX1-202ENST00000439984 INO80B-WBP1J3KQ70 363 aa15.3■□□□□ 0.04
PCNX1-202ENST00000439984 PDXKO00764 312 aa15.3■□□□□ 0.04
PCNX1-202ENST00000439984 P4HA2O15460 535 aa15.3■□□□□ 0.04
PCNX1-202ENST00000439984 LZTS3O60299 673 aaPredicted RBP15.3■□□□□ 0.04
PCNX1-202ENST00000439984 OATP04181 439 aa15.3■□□□□ 0.04
PCNX1-202ENST00000439984 COBLL1Q53SF7 1204 aa15.3■□□□□ 0.04
PCNX1-202ENST00000439984 INO80BQ9C086 356 aaPredicted RBP15.3■□□□□ 0.04
PCNX1-202ENST00000439984 PPCSQ9HAB8 311 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms