RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 LPXNO60711 386 aa12.3□□□□□ -0.44
SMPD4-209ENST00000439886 INHBCP55103 352 aa12.3□□□□□ -0.44
SMPD4-209ENST00000439886 TFDP1Q14186 410 aa12.3□□□□□ -0.44
SMPD4-209ENST00000439886 DDB1Q16531 1140 aa12.3□□□□□ -0.44
SMPD4-209ENST00000439886 SLC44A4Q53GD3 710 aa12.3□□□□□ -0.44
SMPD4-209ENST00000439886 FOXB2Q5VYV0 432 aa12.3□□□□□ -0.44
SMPD4-209ENST00000439886 OR52E8Q6IFG1 317 aa12.3□□□□□ -0.44
SMPD4-209ENST00000439886 FBXO11Q86XK2 927 aa12.3□□□□□ -0.44
SMPD4-209ENST00000439886 EPS8L1Q8TE68 723 aa12.3□□□□□ -0.44
SMPD4-209ENST00000439886 LRRC19Q9H756 370 aa12.3□□□□□ -0.44
SMPD4-209ENST00000439886 PDP2Q9P2J9 529 aa12.3□□□□□ -0.44
SMPD4-209ENST00000439886 TRIM43BA6NCK2 446 aa12.3□□□□□ -0.44
SMPD4-209ENST00000439886 hCG_1984214I3L0E3 225 aa12.3□□□□□ -0.44
SMPD4-209ENST00000439886 FCHO1O14526 889 aa12.3□□□□□ -0.44
SMPD4-209ENST00000439886 GDF11O95390 407 aa12.3□□□□□ -0.44
SMPD4-209ENST00000439886 MLH1P40692 756 aa12.3□□□□□ -0.44
SMPD4-209ENST00000439886 TMPRSS15P98073 1019 aa12.3□□□□□ -0.44
SMPD4-209ENST00000439886 ACVR2BQ13705 512 aa12.3□□□□□ -0.44
SMPD4-209ENST00000439886 CNPY1Q3B7I2 92 aa12.3□□□□□ -0.44
SMPD4-209ENST00000439886 C3orf62Q6ZUJ4 267 aa12.3□□□□□ -0.44
SMPD4-209ENST00000439886 ZNF713Q8N859 430 aaPredicted RBP12.3□□□□□ -0.44
SMPD4-209ENST00000439886 BBOF1Q8ND07 529 aa12.3□□□□□ -0.44
SMPD4-209ENST00000439886 USP33Q8TEY7 942 aa12.3□□□□□ -0.44
SMPD4-209ENST00000439886 MTBPQ96DY7 904 aa12.3□□□□□ -0.44
SMPD4-209ENST00000439886 MPP4Q96JB8 637 aa12.3□□□□□ -0.44
SMPD4-209ENST00000439886 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.3□□□□□ -0.44
SMPD4-209ENST00000439886 ZNF180Q9UJW8 692 aa12.3□□□□□ -0.44
SMPD4-209ENST00000439886 SMG5Q9UPR3 1016 aaKnown RBP12.3□□□□□ -0.44
SMPD4-209ENST00000439886 GTPBP10A4D1E9 387 aaKnown RBP12.3□□□□□ -0.44
SMPD4-209ENST00000439886 I3L4J1 428 aa12.3□□□□□ -0.44
SMPD4-209ENST00000439886 KRT1P04264 644 aa12.3□□□□□ -0.44
SMPD4-209ENST00000439886 MAN1A1P33908 653 aa12.3□□□□□ -0.44
SMPD4-209ENST00000439886 ATXN3P54252 364 aaPredicted RBP12.3□□□□□ -0.44
SMPD4-209ENST00000439886 BASP1P80723 227 aaKnown RBP12.3□□□□□ -0.44
SMPD4-209ENST00000439886 DSG1Q02413 1049 aa12.3□□□□□ -0.44
SMPD4-209ENST00000439886 SP4Q02446 784 aa12.3□□□□□ -0.44
SMPD4-209ENST00000439886 CAV1Q03135 178 aa12.3□□□□□ -0.44
SMPD4-209ENST00000439886 SF3B3Q15393 1217 aaKnown RBP12.3□□□□□ -0.44
SMPD4-209ENST00000439886 PLEKHG4Q58EX7 1191 aa12.3□□□□□ -0.44
SMPD4-209ENST00000439886 PPP1R18Q6NYC8 613 aa12.3□□□□□ -0.44
SMPD4-209ENST00000439886 CENPUQ71F23 418 aa12.3□□□□□ -0.44
SMPD4-209ENST00000439886 USP6NLQ92738 828 aa12.3□□□□□ -0.44
SMPD4-209ENST00000439886 CLMNQ96JQ2 1002 aa12.3□□□□□ -0.44
SMPD4-209ENST00000439886 NT5C1BQ96P26 610 aa12.3□□□□□ -0.44
SMPD4-209ENST00000439886 IWS1Q96ST2 819 aa12.3□□□□□ -0.44
SMPD4-209ENST00000439886 GPR88Q9GZN0 384 aa12.3□□□□□ -0.44
SMPD4-209ENST00000439886 ETNK2Q9NVF9 386 aa12.3□□□□□ -0.44
SMPD4-209ENST00000439886 TAS2R1Q9NYW7 299 aa12.3□□□□□ -0.44
SMPD4-209ENST00000439886 SAE1Q9UBE0 346 aaPredicted RBP12.3□□□□□ -0.44
SMPD4-209ENST00000439886 ADGRA3Q8IWK6 1321 aa12.29□□□□□ -0.44
SMPD4-209ENST00000439886 SLC16A4O15374 487 aa12.29□□□□□ -0.44
SMPD4-209ENST00000439886 CYP11B1P15538 503 aa12.29□□□□□ -0.44
SMPD4-209ENST00000439886 AP2B1P63010 937 aa12.29□□□□□ -0.44
SMPD4-209ENST00000439886 KIF22Q14807 665 aa12.29□□□□□ -0.44
SMPD4-209ENST00000439886 RASA2Q15283 850 aa12.29□□□□□ -0.44
SMPD4-209ENST00000439886 ZNF394Q53GI3 561 aa12.29□□□□□ -0.44
SMPD4-209ENST00000439886 SLC45A4Q5BKX6 768 aa12.29□□□□□ -0.44
SMPD4-209ENST00000439886 GPATCH4Q5T3I0 446 aaKnown RBP12.29□□□□□ -0.44
SMPD4-209ENST00000439886 FAAH2Q6GMR7 532 aa12.29□□□□□ -0.44
SMPD4-209ENST00000439886 ARID3BQ8IVW6 561 aaPredicted RBP12.29□□□□□ -0.44
SMPD4-209ENST00000439886 TMEM121Q9BTD3 319 aa12.29□□□□□ -0.44
SMPD4-209ENST00000439886 DNPEPQ9ULA0 475 aa12.29□□□□□ -0.44
SMPD4-209ENST00000439886 HLA-DOAP06340 250 aa12.29□□□□□ -0.44
SMPD4-209ENST00000439886 HARSP12081 509 aaKnown RBP12.29□□□□□ -0.44
SMPD4-209ENST00000439886 GYS1P13807 737 aa12.29□□□□□ -0.44
SMPD4-209ENST00000439886 HOXA7P31268 230 aaPredicted RBP12.29□□□□□ -0.44
SMPD4-209ENST00000439886 CCNG1P51959 295 aa12.29□□□□□ -0.44
SMPD4-209ENST00000439886 PTK6Q13882 451 aa12.29□□□□□ -0.44
SMPD4-209ENST00000439886 PUS10Q3MIT2 529 aaKnown RBP12.29□□□□□ -0.44
SMPD4-209ENST00000439886 BRINP3Q76B58 766 aa12.29□□□□□ -0.44
SMPD4-209ENST00000439886 ZNF720Q7Z2F6 126 aa12.29□□□□□ -0.44
SMPD4-209ENST00000439886 KBTBD2Q8IY47 623 aa12.29□□□□□ -0.44
SMPD4-209ENST00000439886 POU5F2Q8N7G0 328 aa12.29□□□□□ -0.44
SMPD4-209ENST00000439886 ZBTB8BQ8NAP8 495 aaPredicted RBP12.29□□□□□ -0.44
SMPD4-209ENST00000439886 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.29□□□□□ -0.44
SMPD4-209ENST00000439886 RTFDC1Q9BY42 306 aaPredicted RBP12.29□□□□□ -0.44
SMPD4-209ENST00000439886 RAB20Q9NX57 234 aa12.29□□□□□ -0.44
SMPD4-209ENST00000439886 PSMC3IPQ9P2W1 217 aaPredicted RBP12.29□□□□□ -0.44
SMPD4-209ENST00000439886 PACSIN3Q9UKS6 424 aa12.29□□□□□ -0.44
SMPD4-209ENST00000439886 NUP188Q5SRE5 1749 aa12.29□□□□□ -0.44
SMPD4-209ENST00000439886 ALAS1P13196 640 aa12.29□□□□□ -0.44
SMPD4-209ENST00000439886 PEX3P56589 373 aa12.29□□□□□ -0.44
SMPD4-209ENST00000439886 ASPHQ12797 758 aa12.29□□□□□ -0.44
SMPD4-209ENST00000439886 SGSM1Q2NKQ1 1148 aa12.29□□□□□ -0.44
SMPD4-209ENST00000439886 LPCAT4Q643R3 524 aa12.29□□□□□ -0.44
SMPD4-209ENST00000439886 DCUN1D2Q6PH85 259 aa12.29□□□□□ -0.44
SMPD4-209ENST00000439886 ACAP3Q96P50 834 aa12.29□□□□□ -0.44
SMPD4-209ENST00000439886 AMNQ9BXJ7 453 aa12.29□□□□□ -0.44
SMPD4-209ENST00000439886 GTF3C4Q9UKN8 822 aa12.29□□□□□ -0.44
SMPD4-209ENST00000439886 TAF1P21675 1872 aa12.28□□□□□ -0.44
SMPD4-209ENST00000439886 GPR75-ASB3A0A0A6YYF3 556 aa12.28□□□□□ -0.44
SMPD4-209ENST00000439886 TMEM150BA6NC51 233 aa12.28□□□□□ -0.44
SMPD4-209ENST00000439886 SPECC1L-ADORA2AF8WAN1 911 aa12.28□□□□□ -0.44
SMPD4-209ENST00000439886 GNPATO15228 680 aa12.28□□□□□ -0.44
SMPD4-209ENST00000439886 POTEJP0CG39 1038 aa12.28□□□□□ -0.44
SMPD4-209ENST00000439886 NFKBIAP25963 317 aa12.28□□□□□ -0.44
SMPD4-209ENST00000439886 ARL4CP56559 192 aa12.28□□□□□ -0.44
SMPD4-209ENST00000439886 FMO1Q01740 532 aa12.28□□□□□ -0.44
SMPD4-209ENST00000439886 MED21Q13503 144 aa12.28□□□□□ -0.44
SMPD4-209ENST00000439886 MOGSQ13724 837 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms