RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 FEZ2Q9UHY8 353 aaPredicted RBP4.38□□□□□ -1.71
VPS41-207ENST00000439468 MTO1Q9Y2Z2 717 aaKnown RBP4.38□□□□□ -1.71
VPS41-207ENST00000439468 AATKQ6ZMQ8 1374 aa4.38□□□□□ -1.71
VPS41-207ENST00000439468 A0A1B0GTW7 788 aa4.37□□□□□ -1.71
VPS41-207ENST00000439468 A0A1W2PPL8 197 aa4.37□□□□□ -1.71
VPS41-207ENST00000439468 ANO9A1A5B4 782 aa4.37□□□□□ -1.71
VPS41-207ENST00000439468 GOLIM4O00461 696 aa4.37□□□□□ -1.71
VPS41-207ENST00000439468 ERN1O75460 977 aaKnown RBP4.37□□□□□ -1.71
VPS41-207ENST00000439468 SPDEFO95238 335 aa4.37□□□□□ -1.71
VPS41-207ENST00000439468 MATN4O95460 622 aa4.37□□□□□ -1.71
VPS41-207ENST00000439468 FOSP01100 380 aaPredicted RBP4.37□□□□□ -1.71
VPS41-207ENST00000439468 CFIP05156 583 aa4.37□□□□□ -1.71
VPS41-207ENST00000439468 ALAS1P13196 640 aa4.37□□□□□ -1.71
VPS41-207ENST00000439468 MYF5P13349 255 aa4.37□□□□□ -1.71
VPS41-207ENST00000439468 PHKG2P15735 406 aa4.37□□□□□ -1.71
VPS41-207ENST00000439468 SLC7A1P30825 629 aa4.37□□□□□ -1.71
VPS41-207ENST00000439468 CACNB3P54284 484 aa4.37□□□□□ -1.71
VPS41-207ENST00000439468 SUMO3P55854 103 aaPredicted RBP4.37□□□□□ -1.71
VPS41-207ENST00000439468 SOX8P57073 446 aa4.37□□□□□ -1.71
VPS41-207ENST00000439468 PSMC1P62191 440 aaKnown RBP4.37□□□□□ -1.71
VPS41-207ENST00000439468 NOMO3P69849 1222 aa4.37□□□□□ -1.71
VPS41-207ENST00000439468 HSD11B2P80365 405 aa4.37□□□□□ -1.71
VPS41-207ENST00000439468 GPSM2P81274 684 aa4.37□□□□□ -1.71
VPS41-207ENST00000439468 UBXN2BQ14CS0 331 aa4.37□□□□□ -1.71
VPS41-207ENST00000439468 PABPC1LQ4VXU2 614 aaKnown RBP4.37□□□□□ -1.71
VPS41-207ENST00000439468 CCDC93Q567U6 631 aa4.37□□□□□ -1.71
VPS41-207ENST00000439468 UTP14CQ5TAP6 766 aaKnown RBP4.37□□□□□ -1.71
VPS41-207ENST00000439468 METRNLQ641Q3 311 aa4.37□□□□□ -1.71
VPS41-207ENST00000439468 PCSK4Q6UW60 755 aa4.37□□□□□ -1.71
VPS41-207ENST00000439468 Q6YL49 198 aa4.37□□□□□ -1.71
VPS41-207ENST00000439468 IL17RDQ8NFM7 739 aa4.37□□□□□ -1.71
VPS41-207ENST00000439468 ASB10Q8WXI3 467 aa4.37□□□□□ -1.71
VPS41-207ENST00000439468 ANKS1AQ92625 1134 aa4.37□□□□□ -1.71
VPS41-207ENST00000439468 RIOX1Q9H6W3 641 aa4.37□□□□□ -1.71
VPS41-207ENST00000439468 SARS2Q9NP81 518 aaKnown RBP4.37□□□□□ -1.71
VPS41-207ENST00000439468 KLHL11Q9NVR0 708 aa4.37□□□□□ -1.71
VPS41-207ENST00000439468 MRPS18AQ9NVS2 196 aaKnown RBP4.37□□□□□ -1.71
VPS41-207ENST00000439468 TPCN1Q9ULQ1 816 aa4.37□□□□□ -1.71
VPS41-207ENST00000439468 AGAP1Q9UPQ3 857 aa4.37□□□□□ -1.71
VPS41-207ENST00000439468 CORO2BQ9UQ03 480 aa4.37□□□□□ -1.71
VPS41-207ENST00000439468 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.37□□□□□ -1.71
VPS41-207ENST00000439468 CDHR4A6H8M9 788 aa4.36□□□□□ -1.71
VPS41-207ENST00000439468 TBX3O15119 743 aa4.36□□□□□ -1.71
VPS41-207ENST00000439468 KPNA5O15131 536 aa4.36□□□□□ -1.71
VPS41-207ENST00000439468 PHGDHO43175 533 aaKnown RBP4.36□□□□□ -1.71
VPS41-207ENST00000439468 ARIH2O95376 493 aa4.36□□□□□ -1.71
VPS41-207ENST00000439468 GPANK1O95872 356 aa4.36□□□□□ -1.71
VPS41-207ENST00000439468 IFIT2P09913 472 aaKnown RBP4.36□□□□□ -1.71
VPS41-207ENST00000439468 HKR1P10072 659 aa4.36□□□□□ -1.71
VPS41-207ENST00000439468 FGFR4P22455 802 aa4.36□□□□□ -1.71
VPS41-207ENST00000439468 IL12RB1P42701 662 aa4.36□□□□□ -1.71
VPS41-207ENST00000439468 ALDH5A1P51649 535 aaPredicted RBP4.36□□□□□ -1.71
VPS41-207ENST00000439468 TAP1Q03518 808 aa4.36□□□□□ -1.71
VPS41-207ENST00000439468 OCA2Q04671 838 aa4.36□□□□□ -1.71
VPS41-207ENST00000439468 LONRF1Q17RB8 773 aa4.36□□□□□ -1.71
VPS41-207ENST00000439468 DACT2Q5SW24 774 aa4.36□□□□□ -1.71
VPS41-207ENST00000439468 ARMC6Q6NXE6 501 aa4.36□□□□□ -1.71
VPS41-207ENST00000439468 SESTD1Q86VW0 696 aa4.36□□□□□ -1.71
VPS41-207ENST00000439468 TMEM132CQ8N3T6 1108 aa4.36□□□□□ -1.71
VPS41-207ENST00000439468 SLC44A3Q8N4M1 653 aa4.36□□□□□ -1.71
VPS41-207ENST00000439468 FITM2Q8N6M3 262 aa4.36□□□□□ -1.71
VPS41-207ENST00000439468 TBC1D15Q8TC07 691 aa4.36□□□□□ -1.71
VPS41-207ENST00000439468 BRIX1Q8TDN6 353 aaKnown RBP4.36□□□□□ -1.71
VPS41-207ENST00000439468 STRBPQ96SI9 672 aaKnown RBP4.36□□□□□ -1.71
VPS41-207ENST00000439468 ADAM2Q99965 735 aa4.36□□□□□ -1.71
VPS41-207ENST00000439468 TOR3AQ9H497 397 aa4.36□□□□□ -1.71
VPS41-207ENST00000439468 WDCPQ9H6R7 721 aa4.36□□□□□ -1.71
VPS41-207ENST00000439468 STK32BQ9NY57 414 aa4.36□□□□□ -1.71
VPS41-207ENST00000439468 DAAM1Q9Y4D1 1078 aa4.36□□□□□ -1.71
VPS41-207ENST00000439468 PIPSLA2A3N6 862 aa4.35□□□□□ -1.71
VPS41-207ENST00000439468 CCDC78A2IDD5 438 aa4.35□□□□□ -1.71
VPS41-207ENST00000439468 F8W8V4 182 aa4.35□□□□□ -1.71
VPS41-207ENST00000439468 SLC43A1O75387 559 aa4.35□□□□□ -1.71
VPS41-207ENST00000439468 AGFG2O95081 481 aa4.35□□□□□ -1.71
VPS41-207ENST00000439468 LMNAP02545 664 aaKnown RBP4.35□□□□□ -1.71
VPS41-207ENST00000439468 MTHFD1P11586 935 aaKnown RBP4.35□□□□□ -1.71
VPS41-207ENST00000439468 BRAFP15056 766 aa4.35□□□□□ -1.71
VPS41-207ENST00000439468 PROZP22891 400 aa4.35□□□□□ -1.71
VPS41-207ENST00000439468 PIK3CGP48736 1102 aa4.35□□□□□ -1.71
VPS41-207ENST00000439468 PRIM2P49643 509 aa4.35□□□□□ -1.71
VPS41-207ENST00000439468 FMO1Q01740 532 aa4.35□□□□□ -1.71
VPS41-207ENST00000439468 HDAC1Q13547 482 aaPredicted RBP4.35□□□□□ -1.71
VPS41-207ENST00000439468 BRD3Q15059 726 aa4.35□□□□□ -1.71
VPS41-207ENST00000439468 ERCC6LQ2NKX8 1250 aa4.35□□□□□ -1.71
VPS41-207ENST00000439468 C3orf38Q5JPI3 329 aa4.35□□□□□ -1.71
VPS41-207ENST00000439468 C10orf62Q5T681 223 aaPredicted RBP4.35□□□□□ -1.71
VPS41-207ENST00000439468 ABHD17BQ5VST6 288 aa4.35□□□□□ -1.71
VPS41-207ENST00000439468 SRLQ86TD4 932 aa4.35□□□□□ -1.71
VPS41-207ENST00000439468 MORC1Q86VD1 984 aa4.35□□□□□ -1.71
VPS41-207ENST00000439468 APIPQ96GX9 242 aa4.35□□□□□ -1.71
VPS41-207ENST00000439468 FAM167AQ96KS9 214 aa4.35□□□□□ -1.71
VPS41-207ENST00000439468 RSAD1Q9HA92 442 aa4.35□□□□□ -1.71
VPS41-207ENST00000439468 KIAA1586Q9HCI6 787 aa4.35□□□□□ -1.71
VPS41-207ENST00000439468 CASS4Q9NQ75 786 aa4.35□□□□□ -1.71
VPS41-207ENST00000439468 VSX1Q9NZR4 365 aaPredicted RBP4.35□□□□□ -1.71
VPS41-207ENST00000439468 TAGLN3Q9UI15 199 aa4.35□□□□□ -1.71
VPS41-207ENST00000439468 ARID4BQ4LE39 1312 aaPredicted RBP4.35□□□□□ -1.71
VPS41-207ENST00000439468 MARCH11A6NNE9 402 aa4.34□□□□□ -1.71
VPS41-207ENST00000439468 ZNF785A8K8V0 405 aa4.34□□□□□ -1.71
VPS41-207ENST00000439468 RHPN2P1A8MT19 583 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms