RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 SPATA6Q9NWH7 488 aaPredicted RBP19.92■□□□□ 0.78
AC004540.1-201ENST00000439120 RBAKQ9NYW8 714 aaPredicted RBP19.92■□□□□ 0.78
AC004540.1-201ENST00000439120 SCN1AP35498 2009 aa19.92■□□□□ 0.78
AC004540.1-201ENST00000439120 ZFHX2Q9C0A1 2572 aaPredicted RBP19.91■□□□□ 0.78
AC004540.1-201ENST00000439120 COL4A3Q01955 1670 aa19.91■□□□□ 0.78
AC004540.1-201ENST00000439120 FRMD3A2A2Y4 597 aa19.91■□□□□ 0.78
AC004540.1-201ENST00000439120 KPNA7A9QM74 516 aa19.91■□□□□ 0.78
AC004540.1-201ENST00000439120 LAMTOR5O43504 91 aa19.91■□□□□ 0.78
AC004540.1-201ENST00000439120 MOSPD3O75425 235 aa19.91■□□□□ 0.78
AC004540.1-201ENST00000439120 SOAT2O75908 522 aa19.91■□□□□ 0.78
AC004540.1-201ENST00000439120 GLULP15104 373 aa19.91■□□□□ 0.78
AC004540.1-201ENST00000439120 GDI1P31150 447 aa19.91■□□□□ 0.78
AC004540.1-201ENST00000439120 VIPR2P41587 438 aa19.91■□□□□ 0.78
AC004540.1-201ENST00000439120 TUFMP49411 452 aaKnown RBP19.91■□□□□ 0.78
AC004540.1-201ENST00000439120 TAF12Q16514 161 aa19.91■□□□□ 0.78
AC004540.1-201ENST00000439120 VITQ6UXI7 678 aa19.91■□□□□ 0.78
AC004540.1-201ENST00000439120 HSCBQ8IWL3 235 aa19.91■□□□□ 0.78
AC004540.1-201ENST00000439120 BRSK2Q8IWQ3 736 aa19.91■□□□□ 0.78
AC004540.1-201ENST00000439120 TTC9BQ8N6N2 239 aa19.91■□□□□ 0.78
AC004540.1-201ENST00000439120 PSMG2Q969U7 264 aa19.91■□□□□ 0.78
AC004540.1-201ENST00000439120 E2F7Q96AV8 911 aa19.91■□□□□ 0.78
AC004540.1-201ENST00000439120 GCNAQ96QF7 691 aa19.91■□□□□ 0.78
AC004540.1-201ENST00000439120 ZCWPW1Q9H0M4 648 aa19.91■□□□□ 0.78
AC004540.1-201ENST00000439120 TNMDQ9H2S6 317 aa19.91■□□□□ 0.78
AC004540.1-201ENST00000439120 SEMA4AQ9H3S1 761 aa19.91■□□□□ 0.78
AC004540.1-201ENST00000439120 TFIP11Q9UBB9 837 aaKnown RBP19.91■□□□□ 0.78
AC004540.1-201ENST00000439120 HSFX1Q9UBD0 423 aa19.91■□□□□ 0.78
AC004540.1-201ENST00000439120 R3HCC1Q9Y3T6 440 aaKnown RBP19.91■□□□□ 0.78
AC004540.1-201ENST00000439120 MTF2Q9Y483 593 aaPredicted RBP19.91■□□□□ 0.78
AC004540.1-201ENST00000439120 R4GN57 208 aa19.91■□□□□ 0.78
AC004540.1-201ENST00000439120 GOLGA8IPA6NC78 632 aa19.9■□□□□ 0.78
AC004540.1-201ENST00000439120 GOLGA8JA6NMD2 632 aa19.9■□□□□ 0.78
AC004540.1-201ENST00000439120 MAN2B1O00754 1011 aa19.9■□□□□ 0.78
AC004540.1-201ENST00000439120 NRG2O14511 850 aaPredicted RBP19.9■□□□□ 0.78
AC004540.1-201ENST00000439120 ZNF263O14978 683 aa19.9■□□□□ 0.78
AC004540.1-201ENST00000439120 PPP6R2O75170 966 aa19.9■□□□□ 0.78
AC004540.1-201ENST00000439120 AMPD3Q01432 767 aa19.9■□□□□ 0.78
AC004540.1-201ENST00000439120 SMARCB1Q12824 385 aa19.9■□□□□ 0.78
AC004540.1-201ENST00000439120 ARHGAP15Q53QZ3 475 aa19.9■□□□□ 0.78
AC004540.1-201ENST00000439120 FOXD4L5Q5VV16 416 aaPredicted RBP19.9■□□□□ 0.78
AC004540.1-201ENST00000439120 WSCD1Q658N2 575 aa19.9■□□□□ 0.78
AC004540.1-201ENST00000439120 DNAJB7Q7Z6W7 309 aaPredicted RBP19.9■□□□□ 0.78
AC004540.1-201ENST00000439120 TMC8Q8IU68 726 aa19.9■□□□□ 0.78
AC004540.1-201ENST00000439120 DCP1BQ8IZD4 617 aaKnown RBP19.9■□□□□ 0.78
AC004540.1-201ENST00000439120 C2orf15Q8WU43 125 aaKnown RBP19.9■□□□□ 0.78
AC004540.1-201ENST00000439120 FOXD4L4Q8WXT5 416 aaPredicted RBP19.9■□□□□ 0.78
AC004540.1-201ENST00000439120 CUEDC2Q9H467 287 aa19.9■□□□□ 0.78
AC004540.1-201ENST00000439120 PCIF1Q9H4Z3 704 aa19.9■□□□□ 0.78
AC004540.1-201ENST00000439120 TRPV4Q9HBA0 871 aa19.9■□□□□ 0.78
AC004540.1-201ENST00000439120 AGAP1Q9UPQ3 857 aa19.9■□□□□ 0.78
AC004540.1-201ENST00000439120 EXTL3O43909 919 aa19.89■□□□□ 0.77
AC004540.1-201ENST00000439120 PRPF6O94906 941 aaKnown RBP19.89■□□□□ 0.77
AC004540.1-201ENST00000439120 ITGB3P05106 788 aa19.89■□□□□ 0.77
AC004540.1-201ENST00000439120 SP9P0CG40 484 aa19.89■□□□□ 0.77
AC004540.1-201ENST00000439120 GABRR2P28476 465 aa19.89■□□□□ 0.77
AC004540.1-201ENST00000439120 POLR2BP30876 1174 aaKnown RBP19.89■□□□□ 0.77
AC004540.1-201ENST00000439120 CDR1P51861 262 aa19.89■□□□□ 0.77
AC004540.1-201ENST00000439120 TSPY1Q01534 308 aa19.89■□□□□ 0.77
AC004540.1-201ENST00000439120 MFSD6LQ8IWD5 586 aa19.89■□□□□ 0.77
AC004540.1-201ENST00000439120 ADSSL1Q8N142 457 aa19.89■□□□□ 0.77
AC004540.1-201ENST00000439120 SPPL2BQ8TCT7 592 aa19.89■□□□□ 0.77
AC004540.1-201ENST00000439120 SNX21Q969T3 373 aa19.89■□□□□ 0.77
AC004540.1-201ENST00000439120 DHX58Q96C10 678 aa19.89■□□□□ 0.77
AC004540.1-201ENST00000439120 CBWD1Q9BRT8 395 aa19.89■□□□□ 0.77
AC004540.1-201ENST00000439120 FGFBP2Q9BYJ0 223 aa19.89■□□□□ 0.77
AC004540.1-201ENST00000439120 ATXN3LQ9H3M9 355 aa19.89■□□□□ 0.77
AC004540.1-201ENST00000439120 ABI2Q9NYB9 513 aaPredicted RBP19.89■□□□□ 0.77
AC004540.1-201ENST00000439120 VPS13AQ96RL7 3174 aa19.89■□□□□ 0.77
AC004540.1-201ENST00000439120 HEPACAM2A8MVW5 462 aa19.88■□□□□ 0.77
AC004540.1-201ENST00000439120 DPYSL4O14531 572 aa19.88■□□□□ 0.77
AC004540.1-201ENST00000439120 CUTAO60888 179 aa19.88■□□□□ 0.77
AC004540.1-201ENST00000439120 HUS1O60921 280 aa19.88■□□□□ 0.77
AC004540.1-201ENST00000439120 YEATS4O95619 227 aa19.88■□□□□ 0.77
AC004540.1-201ENST00000439120 LMNAP02545 664 aaKnown RBP19.88■□□□□ 0.77
AC004540.1-201ENST00000439120 KRT19P08727 400 aa19.88■□□□□ 0.77
AC004540.1-201ENST00000439120 TMEM191BP0C7N4 346 aa19.88■□□□□ 0.77
AC004540.1-201ENST00000439120 PDIA4P13667 645 aaKnown RBP19.88■□□□□ 0.77
AC004540.1-201ENST00000439120 TARSP26639 723 aaKnown RBP19.88■□□□□ 0.77
AC004540.1-201ENST00000439120 ASIC1P78348 528 aa19.88■□□□□ 0.77
AC004540.1-201ENST00000439120 BFSP1Q12934 665 aa19.88■□□□□ 0.77
AC004540.1-201ENST00000439120 GPD1LQ8N335 351 aa19.88■□□□□ 0.77
AC004540.1-201ENST00000439120 IQUBQ8NA54 791 aa19.88■□□□□ 0.77
AC004540.1-201ENST00000439120 ZSWIM2Q8NEG5 633 aa19.88■□□□□ 0.77
AC004540.1-201ENST00000439120 CSGALNACT1Q8TDX6 532 aa19.88■□□□□ 0.77
AC004540.1-201ENST00000439120 LPIN3Q9BQK8 851 aa19.88■□□□□ 0.77
AC004540.1-201ENST00000439120 LRRC3Q9BY71 257 aa19.88■□□□□ 0.77
AC004540.1-201ENST00000439120 ZNF334Q9HCZ1 680 aaPredicted RBP19.88■□□□□ 0.77
AC004540.1-201ENST00000439120 ITGA11Q9UKX5 1188 aa19.88■□□□□ 0.77
AC004540.1-201ENST00000439120 NDRG2Q9UN36 371 aaKnown RBP19.88■□□□□ 0.77
AC004540.1-201ENST00000439120 TICRRQ7Z2Z1 1910 aa19.88■□□□□ 0.77
AC004540.1-201ENST00000439120 KIAA0391O15091 583 aaKnown RBP19.87■□□□□ 0.77
AC004540.1-201ENST00000439120 FOXD4L6Q3SYB3 417 aaPredicted RBP19.87■□□□□ 0.77
AC004540.1-201ENST00000439120 GPR158Q5T848 1215 aa19.87■□□□□ 0.77
AC004540.1-201ENST00000439120 FOXD4L3Q6VB84 417 aaPredicted RBP19.87■□□□□ 0.77
AC004540.1-201ENST00000439120 CSGALNACT2Q8N6G5 542 aa19.87■□□□□ 0.77
AC004540.1-201ENST00000439120 LRRC52Q8N7C0 313 aa19.87■□□□□ 0.77
AC004540.1-201ENST00000439120 ANKRD36BP1Q96IX9 119 aa19.87■□□□□ 0.77
AC004540.1-201ENST00000439120 TRIM9Q9C026 710 aa19.87■□□□□ 0.77
AC004540.1-201ENST00000439120 TRPV5Q9NQA5 729 aa19.87■□□□□ 0.77
AC004540.1-201ENST00000439120 PCDHB5Q9Y5E4 795 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms