RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 PPFIA2O75334 1257 aa14.74□□□□□ -0.05
PTCHD3-201ENST00000438700 CSDE1O75534 798 aaKnown RBP14.74□□□□□ -0.05
PTCHD3-201ENST00000438700 IQCF3P0C7M6 154 aa14.74□□□□□ -0.05
PTCHD3-201ENST00000438700 BYSLQ13895 437 aaKnown RBP14.74□□□□□ -0.05
PTCHD3-201ENST00000438700 TMEM132AQ24JP5 1023 aa14.74□□□□□ -0.05
PTCHD3-201ENST00000438700 ATF7IP2Q5U623 682 aa14.74□□□□□ -0.05
PTCHD3-201ENST00000438700 TLK2Q86UE8 772 aa14.74□□□□□ -0.05
PTCHD3-201ENST00000438700 CDR2LQ86X02 465 aaPredicted RBP14.74□□□□□ -0.05
PTCHD3-201ENST00000438700 OR5B17Q8NGF7 314 aa14.74□□□□□ -0.05
PTCHD3-201ENST00000438700 CGRRF1Q99675 332 aa14.74□□□□□ -0.05
PTCHD3-201ENST00000438700 APBA2Q99767 749 aa14.74□□□□□ -0.05
PTCHD3-201ENST00000438700 GPBP1L1Q9HC44 474 aaPredicted RBP14.74□□□□□ -0.05
PTCHD3-201ENST00000438700 GRHL1Q9NZI5 618 aa14.74□□□□□ -0.05
PTCHD3-201ENST00000438700 PCYOX1Q9UHG3 505 aa14.74□□□□□ -0.05
PTCHD3-201ENST00000438700 SLC12A6Q9UHW9 1150 aa14.74□□□□□ -0.05
PTCHD3-201ENST00000438700 GJD2Q9UKL4 321 aa14.74□□□□□ -0.05
PTCHD3-201ENST00000438700 MROH7Q68CQ1 1323 aa14.74□□□□□ -0.05
PTCHD3-201ENST00000438700 A0A087WZ62 844 aa14.74□□□□□ -0.05
PTCHD3-201ENST00000438700 SHBGP04278 402 aa14.74□□□□□ -0.05
PTCHD3-201ENST00000438700 CTGFP29279 349 aa14.74□□□□□ -0.05
PTCHD3-201ENST00000438700 PHKA2P46019 1235 aa14.74□□□□□ -0.05
PTCHD3-201ENST00000438700 NSFP46459 744 aaKnown RBP14.74□□□□□ -0.05
PTCHD3-201ENST00000438700 MCL1Q07820 350 aa14.74□□□□□ -0.05
PTCHD3-201ENST00000438700 SNX1Q13596 522 aa14.74□□□□□ -0.05
PTCHD3-201ENST00000438700 E2F5Q15329 346 aa14.74□□□□□ -0.05
PTCHD3-201ENST00000438700 MARCH8Q5T0T0 291 aa14.74□□□□□ -0.05
PTCHD3-201ENST00000438700 UBAP2Q5T6F2 1119 aaKnown RBP14.74□□□□□ -0.05
PTCHD3-201ENST00000438700 RUFY4Q6ZNE9 571 aa14.74□□□□□ -0.05
PTCHD3-201ENST00000438700 TSHZ1Q6ZSZ6 1077 aa14.74□□□□□ -0.05
PTCHD3-201ENST00000438700 SPATS2Q86XZ4 545 aaKnown RBP14.74□□□□□ -0.05
PTCHD3-201ENST00000438700 KIRREL3Q8IZU9 778 aa14.74□□□□□ -0.05
PTCHD3-201ENST00000438700 C1orf54Q8WWF1 131 aa14.74□□□□□ -0.05
PTCHD3-201ENST00000438700 FDXACB1Q9BRP7 624 aaPredicted RBP14.74□□□□□ -0.05
PTCHD3-201ENST00000438700 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.74□□□□□ -0.05
PTCHD3-201ENST00000438700 MTUS1Q9ULD2 1270 aa14.74□□□□□ -0.05
PTCHD3-201ENST00000438700 NOVA2Q9UNW9 492 aaKnown RBP14.74□□□□□ -0.05
PTCHD3-201ENST00000438700 PCDHB4Q9Y5E5 795 aa14.74□□□□□ -0.05
PTCHD3-201ENST00000438700 MGAMO43451 1857 aa14.74□□□□□ -0.05
PTCHD3-201ENST00000438700 GMNCA6NCL1 334 aa14.73□□□□□ -0.05
PTCHD3-201ENST00000438700 A6NJR5 290 aa14.73□□□□□ -0.05
PTCHD3-201ENST00000438700 OGTO15294 1046 aa14.73□□□□□ -0.05
PTCHD3-201ENST00000438700 COILP38432 576 aaPredicted RBP14.73□□□□□ -0.05
PTCHD3-201ENST00000438700 CUL2Q13617 745 aa14.73□□□□□ -0.05
PTCHD3-201ENST00000438700 SIX1Q15475 284 aaPredicted RBP14.73□□□□□ -0.05
PTCHD3-201ENST00000438700 ZNF568Q3ZCX4 644 aa14.73□□□□□ -0.05
PTCHD3-201ENST00000438700 MPZL3Q6UWV2 235 aa14.73□□□□□ -0.05
PTCHD3-201ENST00000438700 CCDC121Q6ZUS5 278 aa14.73□□□□□ -0.05
PTCHD3-201ENST00000438700 BRSK2Q8IWQ3 736 aa14.73□□□□□ -0.05
PTCHD3-201ENST00000438700 C1orf131Q8NDD1 294 aaKnown RBP14.73□□□□□ -0.05
PTCHD3-201ENST00000438700 MDM1Q8TC05 714 aa14.73□□□□□ -0.05
PTCHD3-201ENST00000438700 PPP1R13LQ8WUF5 828 aa14.73□□□□□ -0.05
PTCHD3-201ENST00000438700 SOCS4Q8WXH5 440 aa14.73□□□□□ -0.05
PTCHD3-201ENST00000438700 C11orf70Q9BRQ4 267 aa14.73□□□□□ -0.05
PTCHD3-201ENST00000438700 NFKBIZQ9BYH8 718 aa14.73□□□□□ -0.05
PTCHD3-201ENST00000438700 TXLNGYQ9BZA5 131 aa14.73□□□□□ -0.05
PTCHD3-201ENST00000438700 PROZP22891 400 aa14.73□□□□□ -0.05
PTCHD3-201ENST00000438700 PMS2P54278 862 aa14.73□□□□□ -0.05
PTCHD3-201ENST00000438700 NOP14P78316 857 aaKnown RBP14.73□□□□□ -0.05
PTCHD3-201ENST00000438700 IRF5Q13568 498 aa14.73□□□□□ -0.05
PTCHD3-201ENST00000438700 EEF1DP3Q658K8 133 aa14.73□□□□□ -0.05
PTCHD3-201ENST00000438700 FUKQ8N0W3 1084 aa14.73□□□□□ -0.05
PTCHD3-201ENST00000438700 UHMK1Q8TAS1 419 aaKnown RBP14.73□□□□□ -0.05
PTCHD3-201ENST00000438700 ATG4AQ8WYN0 398 aa14.73□□□□□ -0.05
PTCHD3-201ENST00000438700 SCLT1Q96NL6 688 aa14.73□□□□□ -0.05
PTCHD3-201ENST00000438700 EPB41L4BQ9H329 900 aa14.73□□□□□ -0.05
PTCHD3-201ENST00000438700 PTPRHQ9HD43 1115 aa14.73□□□□□ -0.05
PTCHD3-201ENST00000438700 SETD4Q9NVD3 440 aa14.73□□□□□ -0.05
PTCHD3-201ENST00000438700 GOLGA6L7A0A1B0GV03 622 aa14.72□□□□□ -0.05
PTCHD3-201ENST00000438700 SMIM23A6NLE4 172 aa14.72□□□□□ -0.05
PTCHD3-201ENST00000438700 O00370 1275 aa14.72□□□□□ -0.05
PTCHD3-201ENST00000438700 ACO1P21399 889 aaKnown RBP14.72□□□□□ -0.05
PTCHD3-201ENST00000438700 GNA15P30679 374 aa14.72□□□□□ -0.05
PTCHD3-201ENST00000438700 MAGOHP61326 146 aaKnown RBP14.72□□□□□ -0.05
PTCHD3-201ENST00000438700 SEC16BQ96JE7 1060 aa14.72□□□□□ -0.05
PTCHD3-201ENST00000438700 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.72□□□□□ -0.05
PTCHD3-201ENST00000438700 NUB1Q9Y5A7 615 aa14.72□□□□□ -0.05
PTCHD3-201ENST00000438700 PODXLO00592 558 aa14.72□□□□□ -0.05
PTCHD3-201ENST00000438700 TRAPPC3O43617 180 aa14.72□□□□□ -0.05
PTCHD3-201ENST00000438700 FGFR4P22455 802 aa14.72□□□□□ -0.05
PTCHD3-201ENST00000438700 RDXP35241 583 aaKnown RBP14.72□□□□□ -0.05
PTCHD3-201ENST00000438700 TM4SF4P48230 202 aa14.72□□□□□ -0.05
PTCHD3-201ENST00000438700 POU5F1BQ06416 359 aa14.72□□□□□ -0.05
PTCHD3-201ENST00000438700 PPP1R7Q15435 360 aa14.72□□□□□ -0.05
PTCHD3-201ENST00000438700 SGO2Q562F6 1265 aa14.72□□□□□ -0.05
PTCHD3-201ENST00000438700 CYB5D1Q6P9G0 228 aa14.72□□□□□ -0.05
PTCHD3-201ENST00000438700 THNSL1Q8IYQ7 743 aa14.72□□□□□ -0.05
PTCHD3-201ENST00000438700 SMC1BQ8NDV3 1235 aa14.72□□□□□ -0.05
PTCHD3-201ENST00000438700 NLRP7Q8WX94 980 aa14.72□□□□□ -0.05
PTCHD3-201ENST00000438700 RAPGEF5Q92565 580 aa14.72□□□□□ -0.05
PTCHD3-201ENST00000438700 PRMT7Q9NVM4 692 aaPredicted RBP14.72□□□□□ -0.05
PTCHD3-201ENST00000438700 CPSF3Q9UKF6 684 aaKnown RBP14.72□□□□□ -0.05
PTCHD3-201ENST00000438700 KIF3CO14782 793 aa14.71□□□□□ -0.05
PTCHD3-201ENST00000438700 CA12O43570 354 aa14.71□□□□□ -0.05
PTCHD3-201ENST00000438700 GJB6O95452 261 aa14.71□□□□□ -0.05
PTCHD3-201ENST00000438700 F2P00734 622 aa14.71□□□□□ -0.05
PTCHD3-201ENST00000438700 GJC1P36383 396 aa14.71□□□□□ -0.05
PTCHD3-201ENST00000438700 OSTNP61366 133 aa14.71□□□□□ -0.05
PTCHD3-201ENST00000438700 CENPCQ03188 943 aa14.71□□□□□ -0.05
PTCHD3-201ENST00000438700 CYP1B1Q16678 543 aa14.71□□□□□ -0.05
PTCHD3-201ENST00000438700 ANKRD20A8PQ5CZ79 823 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms