RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 GRK6P43250 576 aa12.34□□□□□ -0.43
RTN4-211ENST00000438462 TARBP2Q15633 366 aaKnown RBP12.34□□□□□ -0.43
RTN4-211ENST00000438462 UGCGQ16739 394 aa12.34□□□□□ -0.43
RTN4-211ENST00000438462 GAREM2Q75VX8 874 aa12.34□□□□□ -0.43
RTN4-211ENST00000438462 ALLCQ8N6M5 410 aa12.34□□□□□ -0.43
RTN4-211ENST00000438462 OXER1Q8TDS5 423 aa12.34□□□□□ -0.43
RTN4-211ENST00000438462 CPB2Q96IY4 423 aa12.34□□□□□ -0.43
RTN4-211ENST00000438462 SH2D3AQ9BRG2 576 aa12.34□□□□□ -0.43
RTN4-211ENST00000438462 UBAC1Q9BSL1 405 aa12.34□□□□□ -0.43
RTN4-211ENST00000438462 EPN3Q9H201 632 aa12.34□□□□□ -0.43
RTN4-211ENST00000438462 FTSJ1Q9UET6 329 aa12.34□□□□□ -0.43
RTN4-211ENST00000438462 YIPF1Q9Y548 306 aa12.34□□□□□ -0.43
RTN4-211ENST00000438462 IGHV1OR15-9A0A0B4J2B8 117 aa12.33□□□□□ -0.44
RTN4-211ENST00000438462 TMEM150BA6NC51 233 aa12.33□□□□□ -0.44
RTN4-211ENST00000438462 SGK1O00141 431 aa12.33□□□□□ -0.44
RTN4-211ENST00000438462 ERLIN2O94905 339 aa12.33□□□□□ -0.44
RTN4-211ENST00000438462 USP11P51784 963 aa12.33□□□□□ -0.44
RTN4-211ENST00000438462 CYP4F8P98187 520 aa12.33□□□□□ -0.44
RTN4-211ENST00000438462 BNC1Q01954 994 aa12.33□□□□□ -0.44
RTN4-211ENST00000438462 SART3Q15020 963 aaKnown RBP12.33□□□□□ -0.44
RTN4-211ENST00000438462 SUZ12Q15022 739 aaKnown RBP12.33□□□□□ -0.44
RTN4-211ENST00000438462 ARHGAP15Q53QZ3 475 aa12.33□□□□□ -0.44
RTN4-211ENST00000438462 NOTUMQ6P988 496 aa12.33□□□□□ -0.44
RTN4-211ENST00000438462 SRGAP1Q7Z6B7 1085 aa12.33□□□□□ -0.44
RTN4-211ENST00000438462 SIRT2Q8IXJ6 389 aa12.33□□□□□ -0.44
RTN4-211ENST00000438462 ZCCHC9Q8N567 271 aaKnown RBP12.33□□□□□ -0.44
RTN4-211ENST00000438462 TXNDC5Q8NBS9 432 aaKnown RBP12.33□□□□□ -0.44
RTN4-211ENST00000438462 ZSWIM5Q9P217 1185 aa12.33□□□□□ -0.44
RTN4-211ENST00000438462 PARP2Q9UGN5 583 aa12.33□□□□□ -0.44
RTN4-211ENST00000438462 PCDHGA1Q9Y5H4 931 aa12.33□□□□□ -0.44
RTN4-211ENST00000438462 TLN1Q9Y490 2541 aaKnown RBP12.32□□□□□ -0.44
RTN4-211ENST00000438462 A0A1B0GTW7 788 aa12.32□□□□□ -0.44
RTN4-211ENST00000438462 ZNF213O14771 459 aa12.32□□□□□ -0.44
RTN4-211ENST00000438462 TSPAN1O60635 241 aa12.32□□□□□ -0.44
RTN4-211ENST00000438462 RFPL3O75679 317 aa12.32□□□□□ -0.44
RTN4-211ENST00000438462 RECQL4O94761 1208 aa12.32□□□□□ -0.44
RTN4-211ENST00000438462 KLF8O95600 359 aaPredicted RBP12.32□□□□□ -0.44
RTN4-211ENST00000438462 WEE1P30291 646 aa12.32□□□□□ -0.44
RTN4-211ENST00000438462 SYCP2LQ5T4T6 812 aa12.32□□□□□ -0.44
RTN4-211ENST00000438462 TPGS2Q68CL5 300 aa12.32□□□□□ -0.44
RTN4-211ENST00000438462 IL27RAQ6UWB1 636 aa12.32□□□□□ -0.44
RTN4-211ENST00000438462 CPA6Q8N4T0 437 aa12.32□□□□□ -0.44
RTN4-211ENST00000438462 RIN3Q8TB24 985 aa12.32□□□□□ -0.44
RTN4-211ENST00000438462 CCDC51Q96ER9 411 aa12.32□□□□□ -0.44
RTN4-211ENST00000438462 ZNF578Q96N58 590 aaPredicted RBP12.32□□□□□ -0.44
RTN4-211ENST00000438462 CEP89Q96ST8 783 aa12.32□□□□□ -0.44
RTN4-211ENST00000438462 DNAJC25Q9H1X3 360 aa12.32□□□□□ -0.44
RTN4-211ENST00000438462 ECT2Q9H8V3 914 aa12.32□□□□□ -0.44
RTN4-211ENST00000438462 CALCOCO1Q9P1Z2 691 aa12.32□□□□□ -0.44
RTN4-211ENST00000438462 CCL26Q9Y258 94 aa12.32□□□□□ -0.44
RTN4-211ENST00000438462 COL4A3BPQ9Y5P4 624 aa12.32□□□□□ -0.44
RTN4-211ENST00000438462 PTGESO14684 152 aa12.31□□□□□ -0.44
RTN4-211ENST00000438462 GABRR2P28476 465 aa12.31□□□□□ -0.44
RTN4-211ENST00000438462 NT5C2P49902 561 aa12.31□□□□□ -0.44
RTN4-211ENST00000438462 FBXL19Q6PCT2 694 aa12.31□□□□□ -0.44
RTN4-211ENST00000438462 RRP36Q96EU6 259 aaKnown RBP12.31□□□□□ -0.44
RTN4-211ENST00000438462 ZFRQ96KR1 1074 aaKnown RBP12.31□□□□□ -0.44
RTN4-211ENST00000438462 ARHGAP9Q9BRR9 750 aa12.31□□□□□ -0.44
RTN4-211ENST00000438462 NIFKQ9BYG3 293 aaKnown RBP12.31□□□□□ -0.44
RTN4-211ENST00000438462 DPH1Q9BZG8 443 aa12.31□□□□□ -0.44
RTN4-211ENST00000438462 TASP1Q9H6P5 420 aa12.31□□□□□ -0.44
RTN4-211ENST00000438462 SEC63Q9UGP8 760 aaKnown RBP12.31□□□□□ -0.44
RTN4-211ENST00000438462 ZNF638Q14966 1978 aaKnown RBP12.3□□□□□ -0.44
RTN4-211ENST00000438462 ZNF316A6NFI3 1004 aaPredicted RBP12.3□□□□□ -0.44
RTN4-211ENST00000438462 B3GAT3O94766 335 aa12.3□□□□□ -0.44
RTN4-211ENST00000438462 FAM87AP0C7U9 286 aa12.3□□□□□ -0.44
RTN4-211ENST00000438462 SRGAP2CP0DJJ0 459 aa12.3□□□□□ -0.44
RTN4-211ENST00000438462 BRCC3P46736 316 aa12.3□□□□□ -0.44
RTN4-211ENST00000438462 MRPS21P82921 87 aaKnown RBP12.3□□□□□ -0.44
RTN4-211ENST00000438462 PDGFRLQ15198 375 aa12.3□□□□□ -0.44
RTN4-211ENST00000438462 SEC23AQ15436 765 aa12.3□□□□□ -0.44
RTN4-211ENST00000438462 SF3A1Q15459 793 aaKnown RBP12.3□□□□□ -0.44
RTN4-211ENST00000438462 NAB2Q15742 525 aa12.3□□□□□ -0.44
RTN4-211ENST00000438462 WDR45BQ5MNZ6 344 aa12.3□□□□□ -0.44
RTN4-211ENST00000438462 CC2D1AQ6P1N0 951 aaPredicted RBP12.3□□□□□ -0.44
RTN4-211ENST00000438462 PLA2G4DQ86XP0 818 aa12.3□□□□□ -0.44
RTN4-211ENST00000438462 IL17RCQ8NAC3 791 aa12.3□□□□□ -0.44
RTN4-211ENST00000438462 ZNF419Q96HQ0 510 aaPredicted RBP12.3□□□□□ -0.44
RTN4-211ENST00000438462 ZDHHC4Q9NPG8 344 aa12.3□□□□□ -0.44
RTN4-211ENST00000438462 AFF4Q9UHB7 1163 aaKnown RBP12.3□□□□□ -0.44
RTN4-211ENST00000438462 FBXL5Q9UKA1 691 aa12.3□□□□□ -0.44
RTN4-211ENST00000438462 CYP8B1Q9UNU6 501 aa12.3□□□□□ -0.44
RTN4-211ENST00000438462 SSUH2Q9Y2M2 353 aa12.3□□□□□ -0.44
RTN4-211ENST00000438462 PDZD2O15018 2839 aa12.29□□□□□ -0.44
RTN4-211ENST00000438462 FAM86B1E9PN63 330 aa12.29□□□□□ -0.44
RTN4-211ENST00000438462 TMEM189-UBE2V1I3L0A0 370 aa12.29□□□□□ -0.44
RTN4-211ENST00000438462 CBX4O00257 560 aa12.29□□□□□ -0.44
RTN4-211ENST00000438462 NPTXRO95502 500 aa12.29□□□□□ -0.44
RTN4-211ENST00000438462 FAM86B2P0C5J1 330 aa12.29□□□□□ -0.44
RTN4-211ENST00000438462 AXLP30530 894 aa12.29□□□□□ -0.44
RTN4-211ENST00000438462 TIE1P35590 1138 aa12.29□□□□□ -0.44
RTN4-211ENST00000438462 DCTP40126 519 aa12.29□□□□□ -0.44
RTN4-211ENST00000438462 CYP4A11Q02928 519 aa12.29□□□□□ -0.44
RTN4-211ENST00000438462 DNAJC3Q13217 504 aa12.29□□□□□ -0.44
RTN4-211ENST00000438462 CCDC81Q6ZN84 652 aa12.29□□□□□ -0.44
RTN4-211ENST00000438462 NFXL1Q6ZNB6 911 aa12.29□□□□□ -0.44
RTN4-211ENST00000438462 NIPA1Q7RTP0 329 aa12.29□□□□□ -0.44
RTN4-211ENST00000438462 ZNF577Q9BSK1 485 aa12.29□□□□□ -0.44
RTN4-211ENST00000438462 CXCL16Q9H2A7 254 aa12.29□□□□□ -0.44
RTN4-211ENST00000438462 TMPRSS4Q9NRS4 437 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms