RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 BTBD3Q9Y2F9 522 aa4.35□□□□□ -1.71
HMGB1P31-201ENST00000437242 PCDHB1Q9Y5F3 818 aa4.35□□□□□ -1.71
HMGB1P31-201ENST00000437242 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.35□□□□□ -1.71
HMGB1P31-201ENST00000437242 TRIM75PA6NK02 468 aa4.34□□□□□ -1.71
HMGB1P31-201ENST00000437242 K7ESF4 209 aa4.34□□□□□ -1.71
HMGB1P31-201ENST00000437242 NDUFS2O75306 463 aa4.34□□□□□ -1.71
HMGB1P31-201ENST00000437242 JTBO76095 146 aa4.34□□□□□ -1.71
HMGB1P31-201ENST00000437242 NXPH3O95157 252 aa4.34□□□□□ -1.71
HMGB1P31-201ENST00000437242 LATS1O95835 1130 aa4.34□□□□□ -1.71
HMGB1P31-201ENST00000437242 MASP1P48740 699 aa4.34□□□□□ -1.71
HMGB1P31-201ENST00000437242 TLE1Q04724 770 aa4.34□□□□□ -1.71
HMGB1P31-201ENST00000437242 RNF219Q5W0B1 726 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P31-201ENST00000437242 PPP4R3AQ6IN85 833 aa4.34□□□□□ -1.71
HMGB1P31-201ENST00000437242 SCAMP4Q969E2 229 aa4.34□□□□□ -1.71
HMGB1P31-201ENST00000437242 CALCOCO1Q9P1Z2 691 aa4.34□□□□□ -1.71
HMGB1P31-201ENST00000437242 TUBD1Q9UJT1 453 aa4.34□□□□□ -1.71
HMGB1P31-201ENST00000437242 SMIM22K7EJ46 135 aa4.33□□□□□ -1.72
HMGB1P31-201ENST00000437242 TRIM38O00635 465 aa4.33□□□□□ -1.72
HMGB1P31-201ENST00000437242 PPP6CO00743 305 aa4.33□□□□□ -1.72
HMGB1P31-201ENST00000437242 MOSPD3O75425 235 aa4.33□□□□□ -1.72
HMGB1P31-201ENST00000437242 GNAI3P08754 354 aa4.33□□□□□ -1.72
HMGB1P31-201ENST00000437242 CYP2D6P10635 497 aa4.33□□□□□ -1.72
HMGB1P31-201ENST00000437242 ITGALP20701 1170 aa4.33□□□□□ -1.72
HMGB1P31-201ENST00000437242 GNAI1P63096 354 aa4.33□□□□□ -1.72
HMGB1P31-201ENST00000437242 ACAP2Q15057 778 aa4.33□□□□□ -1.72
HMGB1P31-201ENST00000437242 TBCCQ15814 346 aa4.33□□□□□ -1.72
HMGB1P31-201ENST00000437242 PROSER3Q2NL68 480 aa4.33□□□□□ -1.72
HMGB1P31-201ENST00000437242 TEDDM1Q5T9Z0 273 aa4.33□□□□□ -1.72
HMGB1P31-201ENST00000437242 SLC18B1Q6NT16 456 aa4.33□□□□□ -1.72
HMGB1P31-201ENST00000437242 SLC29A4Q7RTT9 530 aa4.33□□□□□ -1.72
HMGB1P31-201ENST00000437242 ZNF804AQ7Z570 1209 aa4.33□□□□□ -1.72
HMGB1P31-201ENST00000437242 ATL2Q8NHH9 583 aa4.33□□□□□ -1.72
HMGB1P31-201ENST00000437242 ATRIPQ8WXE1 791 aa4.33□□□□□ -1.72
HMGB1P31-201ENST00000437242 CLPTM1LQ96KA5 538 aa4.33□□□□□ -1.72
HMGB1P31-201ENST00000437242 MRGPRX4Q96LA9 322 aa4.33□□□□□ -1.72
HMGB1P31-201ENST00000437242 MAN1C1Q9NR34 630 aa4.33□□□□□ -1.72
HMGB1P31-201ENST00000437242 ARHGEF3Q9NR81 526 aa4.33□□□□□ -1.72
HMGB1P31-201ENST00000437242 SERTAD4Q9NUC0 356 aa4.33□□□□□ -1.72
HMGB1P31-201ENST00000437242 DKK3Q9UBP4 350 aa4.33□□□□□ -1.72
HMGB1P31-201ENST00000437242 ZNF785A8K8V0 405 aa4.32□□□□□ -1.72
HMGB1P31-201ENST00000437242 SOAT2O75908 522 aa4.32□□□□□ -1.72
HMGB1P31-201ENST00000437242 CHEK2O96017 543 aa4.32□□□□□ -1.72
HMGB1P31-201ENST00000437242 PCSK6P29122 969 aa4.32□□□□□ -1.72
HMGB1P31-201ENST00000437242 CD6P30203 668 aa4.32□□□□□ -1.72
HMGB1P31-201ENST00000437242 PSMC1P62191 440 aaKnown RBP4.32□□□□□ -1.72
HMGB1P31-201ENST00000437242 IL10RAQ13651 578 aa4.32□□□□□ -1.72
HMGB1P31-201ENST00000437242 SUPT20HL1Q3ZLR7 823 aa4.32□□□□□ -1.72
HMGB1P31-201ENST00000437242 CCDC93Q567U6 631 aa4.32□□□□□ -1.72
HMGB1P31-201ENST00000437242 RBM20Q5T481 1227 aaKnown RBP4.32□□□□□ -1.72
HMGB1P31-201ENST00000437242 PRAMEF17Q5VTA0 474 aa4.32□□□□□ -1.72
HMGB1P31-201ENST00000437242 PDSS2Q86YH6 399 aa4.32□□□□□ -1.72
HMGB1P31-201ENST00000437242 FANCBQ8NB91 859 aa4.32□□□□□ -1.72
HMGB1P31-201ENST00000437242 PSD4Q8NDX1 1056 aa4.32□□□□□ -1.72
HMGB1P31-201ENST00000437242 KLHDC4Q8TBB5 520 aa4.32□□□□□ -1.72
HMGB1P31-201ENST00000437242 TBC1D5Q92609 795 aa4.32□□□□□ -1.72
HMGB1P31-201ENST00000437242 FAM136AQ96C01 138 aa4.32□□□□□ -1.72
HMGB1P31-201ENST00000437242 SH2D3AQ9BRG2 576 aa4.32□□□□□ -1.72
HMGB1P31-201ENST00000437242 CNPPD1Q9BV87 410 aa4.32□□□□□ -1.72
HMGB1P31-201ENST00000437242 BRIP1Q9BX63 1249 aa4.32□□□□□ -1.72
HMGB1P31-201ENST00000437242 AMBRA1Q9C0C7 1298 aa4.32□□□□□ -1.72
HMGB1P31-201ENST00000437242 SMOC2Q9H3U7 446 aa4.32□□□□□ -1.72
HMGB1P31-201ENST00000437242 BRD9Q9H8M2 597 aa4.32□□□□□ -1.72
HMGB1P31-201ENST00000437242 GNL3LQ9NVN8 582 aaKnown RBP4.32□□□□□ -1.72
HMGB1P31-201ENST00000437242 ETAA1Q9NY74 926 aa4.32□□□□□ -1.72
HMGB1P31-201ENST00000437242 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P31-201ENST00000437242 TISP43B9A030 160 aa4.31□□□□□ -1.72
HMGB1P31-201ENST00000437242 HTRA2O43464 458 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P31-201ENST00000437242 RPLP2P05387 115 aaKnown RBP4.31□□□□□ -1.72
HMGB1P31-201ENST00000437242 FAM163BP0C2L3 166 aa4.31□□□□□ -1.72
HMGB1P31-201ENST00000437242 CHRM3P20309 590 aa4.31□□□□□ -1.72
HMGB1P31-201ENST00000437242 C5AR1P21730 350 aa4.31□□□□□ -1.72
HMGB1P31-201ENST00000437242 LPOP22079 712 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P31-201ENST00000437242 HSD3B2P26439 372 aa4.31□□□□□ -1.72
HMGB1P31-201ENST00000437242 ZNF135P52742 658 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P31-201ENST00000437242 FHL1Q13642 323 aa4.31□□□□□ -1.72
HMGB1P31-201ENST00000437242 C3orf36Q3SXR2 165 aa4.31□□□□□ -1.72
HMGB1P31-201ENST00000437242 CEP78Q5JTW2 689 aa4.31□□□□□ -1.72
HMGB1P31-201ENST00000437242 TAF2Q6P1X5 1199 aa4.31□□□□□ -1.72
HMGB1P31-201ENST00000437242 PGM2L1Q6PCE3 622 aa4.31□□□□□ -1.72
HMGB1P31-201ENST00000437242 KRT26Q7Z3Y9 468 aa4.31□□□□□ -1.72
HMGB1P31-201ENST00000437242 JADE3Q92613 823 aa4.31□□□□□ -1.72
HMGB1P31-201ENST00000437242 KAT5Q92993 513 aa4.31□□□□□ -1.72
HMGB1P31-201ENST00000437242 REPS1Q96D71 796 aa4.31□□□□□ -1.72
HMGB1P31-201ENST00000437242 QTRT1Q9BXR0 403 aaKnown RBP4.31□□□□□ -1.72
HMGB1P31-201ENST00000437242 ANLNQ9NQW6 1124 aa4.31□□□□□ -1.72
HMGB1P31-201ENST00000437242 RLIMQ9NVW2 624 aa4.31□□□□□ -1.72
HMGB1P31-201ENST00000437242 MKS1Q9NXB0 559 aa4.31□□□□□ -1.72
HMGB1P31-201ENST00000437242 CFAP97Q9P2B7 532 aa4.31□□□□□ -1.72
HMGB1P31-201ENST00000437242 IPPQ9Y573 584 aa4.31□□□□□ -1.72
HMGB1P31-201ENST00000437242 CCDC154A6NI56 674 aa4.3□□□□□ -1.72
HMGB1P31-201ENST00000437242 TUBB4AP04350 444 aa4.3□□□□□ -1.72
HMGB1P31-201ENST00000437242 GJB1P08034 283 aa4.3□□□□□ -1.72
HMGB1P31-201ENST00000437242 JUPP14923 745 aa4.3□□□□□ -1.72
HMGB1P31-201ENST00000437242 MMP13P45452 471 aa4.3□□□□□ -1.72
HMGB1P31-201ENST00000437242 ALDH9A1P49189 494 aa4.3□□□□□ -1.72
HMGB1P31-201ENST00000437242 PLCD1P51178 756 aa4.3□□□□□ -1.72
HMGB1P31-201ENST00000437242 GPR162Q16538 588 aa4.3□□□□□ -1.72
HMGB1P31-201ENST00000437242 AARS2Q5JTZ9 985 aaKnown RBP4.3□□□□□ -1.72
HMGB1P31-201ENST00000437242 ZNF618Q5T7W0 954 aa4.3□□□□□ -1.72
HMGB1P31-201ENST00000437242 ANKRD16Q6P6B7 361 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms