RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 CDYLQ9Y232 598 aa11.69□□□□□ -0.54
SCN4A-201ENST00000435607 EIF3LQ9Y262 564 aaKnown RBP11.69□□□□□ -0.54
SCN4A-201ENST00000435607 RHOBTB1O94844 696 aa11.68□□□□□ -0.54
SCN4A-201ENST00000435607 SPRP35270 261 aaPredicted RBP11.68□□□□□ -0.54
SCN4A-201ENST00000435607 NLRP11P59045 1033 aaKnown RBP11.68□□□□□ -0.54
SCN4A-201ENST00000435607 RAB14P61106 215 aa11.68□□□□□ -0.54
SCN4A-201ENST00000435607 MTA1Q13330 715 aa11.68□□□□□ -0.54
SCN4A-201ENST00000435607 LDHDQ86WU2 507 aa11.68□□□□□ -0.54
SCN4A-201ENST00000435607 ARHGEF26Q96DR7 871 aa11.68□□□□□ -0.54
SCN4A-201ENST00000435607 GRID2IPA4D2P6 1211 aa11.68□□□□□ -0.54
SCN4A-201ENST00000435607 RTN2O75298 545 aa11.68□□□□□ -0.54
SCN4A-201ENST00000435607 PDGFRBP09619 1106 aa11.68□□□□□ -0.54
SCN4A-201ENST00000435607 PLA2G4AP47712 749 aa11.68□□□□□ -0.54
SCN4A-201ENST00000435607 GEMIN4P57678 1058 aaKnown RBP11.68□□□□□ -0.54
SCN4A-201ENST00000435607 ANKRD13AQ8IZ07 590 aa11.68□□□□□ -0.54
SCN4A-201ENST00000435607 PNKPQ96T60 521 aa11.68□□□□□ -0.54
SCN4A-201ENST00000435607 SOX13Q9UN79 622 aa11.68□□□□□ -0.54
SCN4A-201ENST00000435607 ANXA9O76027 345 aa11.68□□□□□ -0.54
SCN4A-201ENST00000435607 RHOBTB3O94955 611 aa11.68□□□□□ -0.54
SCN4A-201ENST00000435607 POLBP06746 335 aa11.68□□□□□ -0.54
SCN4A-201ENST00000435607 AVPR1AP37288 418 aa11.68□□□□□ -0.54
SCN4A-201ENST00000435607 CNBD2Q96M20 576 aa11.68□□□□□ -0.54
SCN4A-201ENST00000435607 MCCC1Q96RQ3 725 aaPredicted RBP11.68□□□□□ -0.54
SCN4A-201ENST00000435607 TRIT1Q9H3H1 467 aaKnown RBP11.68□□□□□ -0.54
SCN4A-201ENST00000435607 HPS4Q9NQG7 708 aa11.68□□□□□ -0.54
SCN4A-201ENST00000435607 DSEQ9UL01 958 aa11.68□□□□□ -0.54
SCN4A-201ENST00000435607 CYP2D7A0A087X1C5 515 aa11.68□□□□□ -0.54
SCN4A-201ENST00000435607 MBL2P11226 248 aaPredicted RBP11.68□□□□□ -0.54
SCN4A-201ENST00000435607 CKBP12277 381 aa11.68□□□□□ -0.54
SCN4A-201ENST00000435607 SGO1Q5FBB7 561 aa11.68□□□□□ -0.54
SCN4A-201ENST00000435607 C20orf96Q9NUD7 363 aaPredicted RBP11.68□□□□□ -0.54
SCN4A-201ENST00000435607 ABI2Q9NYB9 513 aaPredicted RBP11.68□□□□□ -0.54
SCN4A-201ENST00000435607 GAS2O43903 313 aaKnown RBP11.68□□□□□ -0.54
SCN4A-201ENST00000435607 KPNA6O60684 536 aa11.68□□□□□ -0.54
SCN4A-201ENST00000435607 NFICP08651 508 aa11.68□□□□□ -0.54
SCN4A-201ENST00000435607 PDGFRAP16234 1089 aa11.68□□□□□ -0.54
SCN4A-201ENST00000435607 GARTP22102 1010 aa11.68□□□□□ -0.54
SCN4A-201ENST00000435607 CLK1P49759 484 aaKnown RBP11.68□□□□□ -0.54
SCN4A-201ENST00000435607 RPS7P62081 194 aaKnown RBP11.68□□□□□ -0.54
SCN4A-201ENST00000435607 EDRF1Q3B7T1 1238 aa11.68□□□□□ -0.54
SCN4A-201ENST00000435607 TCEAL5Q5H9L2 206 aa11.68□□□□□ -0.54
SCN4A-201ENST00000435607 PLA2G4FQ68DD2 849 aa11.68□□□□□ -0.54
SCN4A-201ENST00000435607 DDI1Q8WTU0 396 aa11.68□□□□□ -0.54
SCN4A-201ENST00000435607 TGS1Q96RS0 853 aaKnown RBP11.68□□□□□ -0.54
SCN4A-201ENST00000435607 TASP1Q9H6P5 420 aa11.68□□□□□ -0.54
SCN4A-201ENST00000435607 BCL2L12Q9HB09 334 aa11.68□□□□□ -0.54
SCN4A-201ENST00000435607 NMRK2Q9NPI5 230 aa11.68□□□□□ -0.54
SCN4A-201ENST00000435607 ATP6V1HQ9UI12 483 aa11.68□□□□□ -0.54
SCN4A-201ENST00000435607 POLR1DQ9Y2S0 133 aa11.68□□□□□ -0.54
SCN4A-201ENST00000435607 SHANK2Q9UPX8 1470 aa11.68□□□□□ -0.54
SCN4A-201ENST00000435607 SOWAHDA6NJG2 315 aa11.68□□□□□ -0.54
SCN4A-201ENST00000435607 SLC26A4O43511 780 aa11.68□□□□□ -0.54
SCN4A-201ENST00000435607 THPOP40225 353 aa11.68□□□□□ -0.54
SCN4A-201ENST00000435607 OXCT1P55809 520 aa11.68□□□□□ -0.54
SCN4A-201ENST00000435607 DHX34Q14147 1143 aaKnown RBP11.68□□□□□ -0.54
SCN4A-201ENST00000435607 C1orf131Q8NDD1 294 aaKnown RBP11.68□□□□□ -0.54
SCN4A-201ENST00000435607 PPCSQ9HAB8 311 aa11.68□□□□□ -0.54
SCN4A-201ENST00000435607 HSPBP1Q9NZL4 362 aa11.68□□□□□ -0.54
SCN4A-201ENST00000435607 EMSYQ7Z589 1322 aa11.68□□□□□ -0.54
SCN4A-201ENST00000435607 COL15A1P39059 1388 aa11.68□□□□□ -0.54
SCN4A-201ENST00000435607 IFNA14P01570 189 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 MPOP05164 745 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 GRAMD1CQ8IYS0 662 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 GPR101Q96P66 508 aaPredicted RBP11.67□□□□□ -0.54
SCN4A-201ENST00000435607 SENP7Q9BQF6 1050 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 EXOSC4Q9NPD3 245 aaKnown RBP11.67□□□□□ -0.54
SCN4A-201ENST00000435607 ITIH6Q6UXX5 1313 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 SRP72O76094 671 aaKnown RBP11.67□□□□□ -0.54
SCN4A-201ENST00000435607 PCDH8O95206 1070 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 GNRH1P01148 92 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 EN1Q05925 392 aaPredicted RBP11.67□□□□□ -0.54
SCN4A-201ENST00000435607 STAT4Q14765 748 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 NCF4Q15080 339 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 ALG11Q2TAA5 492 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 IZUMO3Q5VZ72 239 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 NAPEPLDQ6IQ20 393 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 LINC00301Q8NCQ3 95 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 CHST13Q8NET6 341 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 PUS7LQ9H0K6 701 aaKnown RBP11.67□□□□□ -0.54
SCN4A-201ENST00000435607 RMND5AQ9H871 391 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 MINPP1Q9UNW1 487 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 PCDHB6Q9Y5E3 794 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 H7C0S8 307 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 MMRN1Q13201 1228 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 KRT31Q15323 416 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 TOMM20Q15388 145 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 FRMD5Q7Z6J6 570 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 AGR3Q8TD06 166 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 PIGBQ92521 554 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 INPP5DQ92835 1189 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 POTEMA6NI47 508 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 AKAP10O43572 662 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 RCAN1P53805 252 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 CCDC137Q6PK04 289 aaKnown RBP11.67□□□□□ -0.54
SCN4A-201ENST00000435607 POTEAQ6S8J7 498 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 DSG4Q86SJ6 1040 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 SETD3Q86TU7 594 aaPredicted RBP11.67□□□□□ -0.54
SCN4A-201ENST00000435607 COMMD2Q86X83 199 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 GINS4Q9BRT9 223 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 AHSPQ9NZD4 102 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms