RNA–Protein interactions for RNA: ENST00000435401.1

LINC00353-201, long intergenic non-protein coding RNA 353, humanhuman

TSL 5 BASIC

Gene LINC00353, Length 685 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00353-201ENST00000435401 RNF7Q9UBF6 113 aa4.99□□□□□ -1.61
LINC00353-201ENST00000435401 SAP30BPQ9UHR5 308 aaKnown RBP4.99□□□□□ -1.61
LINC00353-201ENST00000435401 PCDHB1Q9Y5F3 818 aa4.99□□□□□ -1.61
LINC00353-201ENST00000435401 MYBBP1AQ9BQG0 1328 aaKnown RBP4.98□□□□□ -1.61
LINC00353-201ENST00000435401 GOLGA6CA6NDK9 693 aa4.98□□□□□ -1.61
LINC00353-201ENST00000435401 GOLGA6BA6NDN3 693 aa4.98□□□□□ -1.61
LINC00353-201ENST00000435401 LRRC14BA6NHZ5 514 aa4.98□□□□□ -1.61
LINC00353-201ENST00000435401 A6NNZ2 444 aa4.98□□□□□ -1.61
LINC00353-201ENST00000435401 KRTAP29-1A8MX34 341 aaPredicted RBP4.98□□□□□ -1.61
LINC00353-201ENST00000435401 KIF3BO15066 747 aa4.98□□□□□ -1.61
LINC00353-201ENST00000435401 CTNND1O60716 968 aaKnown RBP4.98□□□□□ -1.61
LINC00353-201ENST00000435401 MAP4K4O95819 1239 aaPredicted RBP4.98□□□□□ -1.61
LINC00353-201ENST00000435401 ALDH2P05091 517 aa4.98□□□□□ -1.61
LINC00353-201ENST00000435401 GOLGA6DP0CG33 693 aa4.98□□□□□ -1.61
LINC00353-201ENST00000435401 FCER1AP12319 257 aa4.98□□□□□ -1.61
LINC00353-201ENST00000435401 GPD1P21695 349 aa4.98□□□□□ -1.61
LINC00353-201ENST00000435401 GRIA3P42263 894 aa4.98□□□□□ -1.61
LINC00353-201ENST00000435401 SOX10P56693 466 aa4.98□□□□□ -1.61
LINC00353-201ENST00000435401 ATP8B2P98198 1209 aa4.98□□□□□ -1.61
LINC00353-201ENST00000435401 DSC2Q02487 901 aa4.98□□□□□ -1.61
LINC00353-201ENST00000435401 FPGSQ05932 587 aa4.98□□□□□ -1.61
LINC00353-201ENST00000435401 GALEQ14376 348 aa4.98□□□□□ -1.61
LINC00353-201ENST00000435401 SLC4A10Q6U841 1118 aa4.98□□□□□ -1.61
LINC00353-201ENST00000435401 RHOT1Q8IXI2 618 aa4.98□□□□□ -1.61
LINC00353-201ENST00000435401 ZBTB34Q8NCN2 500 aa4.98□□□□□ -1.61
LINC00353-201ENST00000435401 DIS3LQ8TF46 1054 aaKnown RBP4.98□□□□□ -1.61
LINC00353-201ENST00000435401 SCARB1Q8WTV0 552 aa4.98□□□□□ -1.61
LINC00353-201ENST00000435401 MVB12AQ96EY5 273 aa4.98□□□□□ -1.61
LINC00353-201ENST00000435401 CPNE5Q9HCH3 593 aa4.98□□□□□ -1.61
LINC00353-201ENST00000435401 INTS13Q9NVM9 706 aa4.98□□□□□ -1.61
LINC00353-201ENST00000435401 GOLGA6AQ9NYA3 693 aa4.98□□□□□ -1.61
LINC00353-201ENST00000435401 NEU2Q9Y3R4 380 aa4.98□□□□□ -1.61
LINC00353-201ENST00000435401 PRAMEF33A0A0G2JMD5 474 aa4.97□□□□□ -1.61
LINC00353-201ENST00000435401 CGB1A6NKQ9 187 aa4.97□□□□□ -1.61
LINC00353-201ENST00000435401 PROM1O43490 865 aa4.97□□□□□ -1.61
LINC00353-201ENST00000435401 PRAMEF10O60809 474 aa4.97□□□□□ -1.61
LINC00353-201ENST00000435401 HAUS5O94927 633 aa4.97□□□□□ -1.61
LINC00353-201ENST00000435401 RPS7P62081 194 aaKnown RBP4.97□□□□□ -1.61
LINC00353-201ENST00000435401 PTPRRQ15256 657 aa4.97□□□□□ -1.61
LINC00353-201ENST00000435401 LLGL1Q15334 1064 aa4.97□□□□□ -1.61
LINC00353-201ENST00000435401 PGS1Q32NB8 556 aa4.97□□□□□ -1.61
LINC00353-201ENST00000435401 MAP9Q49MG5 647 aa4.97□□□□□ -1.61
LINC00353-201ENST00000435401 CLNKQ7Z7G1 428 aa4.97□□□□□ -1.61
LINC00353-201ENST00000435401 DGKHQ86XP1 1220 aa4.97□□□□□ -1.61
LINC00353-201ENST00000435401 COL23A1Q86Y22 540 aaPredicted RBP4.97□□□□□ -1.61
LINC00353-201ENST00000435401 ZGPATQ8N5A5 531 aaKnown RBP4.97□□□□□ -1.61
LINC00353-201ENST00000435401 HDAC10Q969S8 669 aa4.97□□□□□ -1.61
LINC00353-201ENST00000435401 SARAFQ96BY9 339 aa4.97□□□□□ -1.61
LINC00353-201ENST00000435401 FBXL20Q96IG2 436 aa4.97□□□□□ -1.61
LINC00353-201ENST00000435401 DMRTA2Q96SC8 542 aa4.97□□□□□ -1.61
LINC00353-201ENST00000435401 MAP3K14Q99558 947 aa4.97□□□□□ -1.61
LINC00353-201ENST00000435401 C7orf25Q9BPX7 421 aa4.97□□□□□ -1.61
LINC00353-201ENST00000435401 C1QTNF7Q9BXJ2 289 aa4.97□□□□□ -1.61
LINC00353-201ENST00000435401 C11orf54Q9H0W9 315 aaPredicted RBP4.97□□□□□ -1.61
LINC00353-201ENST00000435401 GEMIN8Q9NWZ8 242 aaKnown RBP4.97□□□□□ -1.61
LINC00353-201ENST00000435401 FRMPD2Q68DX3 1309 aaPredicted RBP4.97□□□□□ -1.61
LINC00353-201ENST00000435401 PROK1P58294 105 aa4.96□□□□□ -1.62
LINC00353-201ENST00000435401 CTXN1P60606 82 aa4.96□□□□□ -1.62
LINC00353-201ENST00000435401 TARDBPQ13148 414 aaKnown RBP eCLIP4.96□□□□□ -1.62
LINC00353-201ENST00000435401 OVCH2Q7RTZ1 564 aa4.96□□□□□ -1.62
LINC00353-201ENST00000435401 C1QL2Q7Z5L3 287 aa4.96□□□□□ -1.62
LINC00353-201ENST00000435401 PEG10Q86TG7 708 aaKnown RBP4.96□□□□□ -1.62
LINC00353-201ENST00000435401 CCDC146Q8IYE0 955 aa4.96□□□□□ -1.62
LINC00353-201ENST00000435401 PGBD1Q96JS3 809 aa4.96□□□□□ -1.62
LINC00353-201ENST00000435401 UBXN7O94888 489 aa4.95□□□□□ -1.62
LINC00353-201ENST00000435401 U2AF1L5P0DN76 240 aaPredicted RBP4.95□□□□□ -1.62
LINC00353-201ENST00000435401 MTHFD1P11586 935 aaKnown RBP4.95□□□□□ -1.62
LINC00353-201ENST00000435401 KCNA2P16389 499 aa4.95□□□□□ -1.62
LINC00353-201ENST00000435401 GATA3P23771 443 aa4.95□□□□□ -1.62
LINC00353-201ENST00000435401 ZNF81P51508 661 aa4.95□□□□□ -1.62
LINC00353-201ENST00000435401 MAP2K6P52564 334 aa4.95□□□□□ -1.62
LINC00353-201ENST00000435401 MAPK10P53779 464 aa4.95□□□□□ -1.62
LINC00353-201ENST00000435401 U2AF1Q01081 240 aaKnown RBP eCLIP4.95□□□□□ -1.62
LINC00353-201ENST00000435401 ZNF844Q08AG5 666 aa4.95□□□□□ -1.62
LINC00353-201ENST00000435401 DYRK1AQ13627 763 aa4.95□□□□□ -1.62
LINC00353-201ENST00000435401 GBX1Q14549 363 aa4.95□□□□□ -1.62
LINC00353-201ENST00000435401 KSR2Q6VAB6 950 aa4.95□□□□□ -1.62
LINC00353-201ENST00000435401 MIGA2Q7L4E1 593 aa4.95□□□□□ -1.62
LINC00353-201ENST00000435401 CAMKK1Q8N5S9 505 aa4.95□□□□□ -1.62
LINC00353-201ENST00000435401 HASPINQ8TF76 798 aa4.95□□□□□ -1.62
LINC00353-201ENST00000435401 TFAP2BQ92481 460 aa4.95□□□□□ -1.62
LINC00353-201ENST00000435401 TMEM125Q96AQ2 219 aa4.95□□□□□ -1.62
LINC00353-201ENST00000435401 C1GALT1C1Q96EU7 318 aa4.95□□□□□ -1.62
LINC00353-201ENST00000435401 CCDC136Q96JN2 1154 aa4.95□□□□□ -1.62
LINC00353-201ENST00000435401 CGRRF1Q99675 332 aa4.95□□□□□ -1.62
LINC00353-201ENST00000435401 CCDC194A0A1B0GVG4 234 aa4.94□□□□□ -1.62
LINC00353-201ENST00000435401 WIPF3A6NGB9 483 aa4.94□□□□□ -1.62
LINC00353-201ENST00000435401 PROB1E7EW31 1015 aa4.94□□□□□ -1.62
LINC00353-201ENST00000435401 AGFG2O95081 481 aa4.94□□□□□ -1.62
LINC00353-201ENST00000435401 TSTD2Q5T7W7 516 aa4.94□□□□□ -1.62
LINC00353-201ENST00000435401 UTP14CQ5TAP6 766 aaKnown RBP4.94□□□□□ -1.62
LINC00353-201ENST00000435401 CYB5RLQ6IPT4 315 aa4.94□□□□□ -1.62
LINC00353-201ENST00000435401 TSHZ1Q6ZSZ6 1077 aa4.94□□□□□ -1.62
LINC00353-201ENST00000435401 PLBD2Q8NHP8 589 aa4.94□□□□□ -1.62
LINC00353-201ENST00000435401 SLC30A5Q8TAD4 765 aa4.94□□□□□ -1.62
LINC00353-201ENST00000435401 NSUN6Q8TEA1 469 aaKnown RBP4.94□□□□□ -1.62
LINC00353-201ENST00000435401 CLPTM1LQ96KA5 538 aa4.94□□□□□ -1.62
LINC00353-201ENST00000435401 VRK1Q99986 396 aaPredicted RBP4.94□□□□□ -1.62
LINC00353-201ENST00000435401 ARNT2Q9HBZ2 717 aa4.94□□□□□ -1.62
LINC00353-201ENST00000435401 PRDM11Q9NQV5 511 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms