RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 NFIL3Q16649 462 aa16.47■□□□□ 0.23
SCARF1-203ENST00000434376 P3H1Q32P28 736 aa16.47■□□□□ 0.23
SCARF1-203ENST00000434376 FAXCQ5TGI0 409 aa16.47■□□□□ 0.23
SCARF1-203ENST00000434376 METTL7BQ6UX53 244 aa16.47■□□□□ 0.23
SCARF1-203ENST00000434376 JOSD2Q8TAC2 188 aa16.47■□□□□ 0.23
SCARF1-203ENST00000434376 GRHL1Q9NZI5 618 aa16.47■□□□□ 0.23
SCARF1-203ENST00000434376 AGAP1Q9UPQ3 857 aa16.47■□□□□ 0.23
SCARF1-203ENST00000434376 NR2E3Q9Y5X4 410 aa16.47■□□□□ 0.23
SCARF1-203ENST00000434376 GOLGA8RI6L899 631 aa16.47■□□□□ 0.23
SCARF1-203ENST00000434376 TNNC2P02585 160 aa16.47■□□□□ 0.23
SCARF1-203ENST00000434376 PDGFRBP09619 1106 aa16.47■□□□□ 0.23
SCARF1-203ENST00000434376 PSMC1P62191 440 aaKnown RBP16.47■□□□□ 0.23
SCARF1-203ENST00000434376 GAD2Q05329 585 aa16.47■□□□□ 0.23
SCARF1-203ENST00000434376 GPS1Q13098 491 aa16.47■□□□□ 0.23
SCARF1-203ENST00000434376 FAM47EQ6ZV65 393 aa16.47■□□□□ 0.23
SCARF1-203ENST00000434376 ABRAQ8N0Z2 381 aa16.47■□□□□ 0.23
SCARF1-203ENST00000434376 CHST13Q8NET6 341 aa16.47■□□□□ 0.23
SCARF1-203ENST00000434376 PLVAPQ9BX97 442 aa16.47■□□□□ 0.23
SCARF1-203ENST00000434376 RPF1Q9H9Y2 349 aaKnown RBP16.47■□□□□ 0.23
SCARF1-203ENST00000434376 ALG13Q9NP73 1137 aaKnown RBP16.47■□□□□ 0.23
SCARF1-203ENST00000434376 ZNF112Q9UJU3 913 aa16.47■□□□□ 0.23
SCARF1-203ENST00000434376 GPR25O00155 361 aa16.46■□□□□ 0.23
SCARF1-203ENST00000434376 CD48P09326 243 aa16.46■□□□□ 0.23
SCARF1-203ENST00000434376 POLR2BP30876 1174 aaKnown RBP16.46■□□□□ 0.23
SCARF1-203ENST00000434376 RFC1P35251 1148 aaPredicted RBP16.46■□□□□ 0.23
SCARF1-203ENST00000434376 NOMO3P69849 1222 aa16.46■□□□□ 0.23
SCARF1-203ENST00000434376 TMED2Q15363 201 aa16.46■□□□□ 0.23
SCARF1-203ENST00000434376 KIAA0319LQ8IZA0 1049 aa16.46■□□□□ 0.23
SCARF1-203ENST00000434376 TWNKQ96RR1 684 aa16.46■□□□□ 0.23
SCARF1-203ENST00000434376 PLCD4Q9BRC7 762 aa16.46■□□□□ 0.23
SCARF1-203ENST00000434376 EVPLQ92817 2033 aa16.46■□□□□ 0.23
SCARF1-203ENST00000434376 KIAA1217Q5T5P2 1943 aa16.46■□□□□ 0.23
SCARF1-203ENST00000434376 MCM3APO60318 1980 aa16.46■□□□□ 0.23
SCARF1-203ENST00000434376 TOM1L1O75674 476 aa16.46■□□□□ 0.23
SCARF1-203ENST00000434376 OGDHQ02218 1023 aa16.46■□□□□ 0.23
SCARF1-203ENST00000434376 C12orf56Q8IXR9 622 aa16.46■□□□□ 0.23
SCARF1-203ENST00000434376 SAYSD1Q9NPB0 183 aa16.46■□□□□ 0.23
SCARF1-203ENST00000434376 NGRNQ9NPE2 291 aaKnown RBP16.46■□□□□ 0.23
SCARF1-203ENST00000434376 SETD4Q9NVD3 440 aa16.46■□□□□ 0.23
SCARF1-203ENST00000434376 M0QYV0 167 aa16.45■□□□□ 0.22
SCARF1-203ENST00000434376 TRAPPC3O43617 180 aa16.45■□□□□ 0.22
SCARF1-203ENST00000434376 RASSF9O75901 435 aa16.45■□□□□ 0.22
SCARF1-203ENST00000434376 GAS8O95995 478 aa16.45■□□□□ 0.22
SCARF1-203ENST00000434376 RFX1P22670 979 aa16.45■□□□□ 0.22
SCARF1-203ENST00000434376 PTGIRP43119 386 aa16.45■□□□□ 0.22
SCARF1-203ENST00000434376 POU5F1Q01860 360 aaKnown RBP16.45■□□□□ 0.22
SCARF1-203ENST00000434376 MYBPC2Q14324 1141 aa16.45■□□□□ 0.22
SCARF1-203ENST00000434376 FASTKD3Q14CZ7 662 aaKnown RBP16.45■□□□□ 0.22
SCARF1-203ENST00000434376 IZUMO3Q5VZ72 239 aa16.45■□□□□ 0.22
SCARF1-203ENST00000434376 SLFN12LQ6IEE8 588 aa16.45■□□□□ 0.22
SCARF1-203ENST00000434376 CCDC63Q8NA47 563 aa16.45■□□□□ 0.22
SCARF1-203ENST00000434376 STAMBPL1Q96FJ0 436 aa16.45■□□□□ 0.22
SCARF1-203ENST00000434376 GPR20Q99678 358 aa16.45■□□□□ 0.22
SCARF1-203ENST00000434376 A0A1B0GUA9 196 aa16.45■□□□□ 0.22
SCARF1-203ENST00000434376 CYP1A2P05177 515 aa16.45■□□□□ 0.22
SCARF1-203ENST00000434376 UNGP13051 313 aaPredicted RBP16.45■□□□□ 0.22
SCARF1-203ENST00000434376 ARL2P36404 184 aa16.45■□□□□ 0.22
SCARF1-203ENST00000434376 PHKA2P46019 1235 aa16.45■□□□□ 0.22
SCARF1-203ENST00000434376 PREPLQ4J6C6 727 aaPredicted RBP16.45■□□□□ 0.22
SCARF1-203ENST00000434376 PPP6R3Q5H9R7 873 aaPredicted RBP16.45■□□□□ 0.22
SCARF1-203ENST00000434376 KCTD17Q8N5Z5 321 aa16.45■□□□□ 0.22
SCARF1-203ENST00000434376 ANKS4BQ8N8V4 417 aa16.45■□□□□ 0.22
SCARF1-203ENST00000434376 C12orf65Q9H3J6 166 aaKnown RBP16.45■□□□□ 0.22
SCARF1-203ENST00000434376 ACTR5Q9H9F9 607 aaPredicted RBP16.45■□□□□ 0.22
SCARF1-203ENST00000434376 METTL5Q9NRN9 209 aaKnown RBP16.45■□□□□ 0.22
SCARF1-203ENST00000434376 INTS9Q9NV88 658 aaKnown RBP16.45■□□□□ 0.22
SCARF1-203ENST00000434376 UVRAGQ9P2Y5 699 aa16.45■□□□□ 0.22
SCARF1-203ENST00000434376 MCM8Q9UJA3 840 aa16.45■□□□□ 0.22
SCARF1-203ENST00000434376 FDX1P10109 184 aa16.45■□□□□ 0.22
SCARF1-203ENST00000434376 AKAP5P24588 427 aa16.45■□□□□ 0.22
SCARF1-203ENST00000434376 PSEN1P49768 467 aa16.45■□□□□ 0.22
SCARF1-203ENST00000434376 GCNT1Q02742 428 aa16.45■□□□□ 0.22
SCARF1-203ENST00000434376 MTMR3Q13615 1198 aa16.45■□□□□ 0.22
SCARF1-203ENST00000434376 ZNF667Q5HYK9 610 aa16.45■□□□□ 0.22
SCARF1-203ENST00000434376 OR6B2Q6IFH4 312 aa16.45■□□□□ 0.22
SCARF1-203ENST00000434376 C11orf63Q6NUN7 778 aa16.45■□□□□ 0.22
SCARF1-203ENST00000434376 RNF169Q8NCN4 708 aa16.45■□□□□ 0.22
SCARF1-203ENST00000434376 CCDC197Q8NCU1 140 aa16.45■□□□□ 0.22
SCARF1-203ENST00000434376 FBXL18Q96ME1 805 aa16.45■□□□□ 0.22
SCARF1-203ENST00000434376 CGRRF1Q99675 332 aa16.45■□□□□ 0.22
SCARF1-203ENST00000434376 LBHD1Q9BQE6 289 aaPredicted RBP16.45■□□□□ 0.22
SCARF1-203ENST00000434376 PDLIM7Q9NR12 457 aa16.45■□□□□ 0.22
SCARF1-203ENST00000434376 ADARB2Q9NS39 739 aaKnown RBP16.45■□□□□ 0.22
SCARF1-203ENST00000434376 HEY1Q9Y5J3 304 aa16.45■□□□□ 0.22
SCARF1-203ENST00000434376 LACTBL1A8MY62 500 aa16.44■□□□□ 0.22
SCARF1-203ENST00000434376 H0YGN5 161 aa16.44■□□□□ 0.22
SCARF1-203ENST00000434376 MSCO60682 206 aa16.44■□□□□ 0.22
SCARF1-203ENST00000434376 GH1P01241 217 aa16.44■□□□□ 0.22
SCARF1-203ENST00000434376 ARSEP51690 589 aa16.44■□□□□ 0.22
SCARF1-203ENST00000434376 CCDC142Q17RM4 750 aa16.44■□□□□ 0.22
SCARF1-203ENST00000434376 JADE1Q6IE81 842 aa16.44■□□□□ 0.22
SCARF1-203ENST00000434376 DPY19L2Q6NUT2 758 aa16.44■□□□□ 0.22
SCARF1-203ENST00000434376 ARMCX2Q7L311 632 aa16.44■□□□□ 0.22
SCARF1-203ENST00000434376 ANKRD13AQ8IZ07 590 aa16.44■□□□□ 0.22
SCARF1-203ENST00000434376 KIF2BQ8N4N8 673 aa16.44■□□□□ 0.22
SCARF1-203ENST00000434376 ANKRD36BP1Q96IX9 119 aa16.44■□□□□ 0.22
SCARF1-203ENST00000434376 PABPC3Q9H361 631 aaKnown RBP16.44■□□□□ 0.22
SCARF1-203ENST00000434376 KIF9Q9HAQ2 790 aa16.44■□□□□ 0.22
SCARF1-203ENST00000434376 PIH1D1Q9NWS0 290 aaKnown RBP16.44■□□□□ 0.22
SCARF1-203ENST00000434376 COQ4Q9Y3A0 265 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms