RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 TARBP2Q15633 366 aaKnown RBP14.44□□□□□ -0.1
COL6A3-207ENST00000433762 OASLQ15646 514 aaKnown RBP14.44□□□□□ -0.1
COL6A3-207ENST00000433762 STXBP2Q15833 593 aa14.44□□□□□ -0.1
COL6A3-207ENST00000433762 PPP1R15BQ5SWA1 713 aa14.44□□□□□ -0.1
COL6A3-207ENST00000433762 SPOCD1Q6ZMY3 1216 aa14.44□□□□□ -0.1
COL6A3-207ENST00000433762 GSTA5Q7RTV2 222 aa14.44□□□□□ -0.1
COL6A3-207ENST00000433762 EXOC8Q8IYI6 725 aa14.44□□□□□ -0.1
COL6A3-207ENST00000433762 TTC13Q8NBP0 860 aa14.44□□□□□ -0.1
COL6A3-207ENST00000433762 CHST13Q8NET6 341 aa14.44□□□□□ -0.1
COL6A3-207ENST00000433762 ASAP3Q8TDY4 903 aa14.44□□□□□ -0.1
COL6A3-207ENST00000433762 FNIP1Q8TF40 1166 aa14.44□□□□□ -0.1
COL6A3-207ENST00000433762 JDP2Q8WYK2 163 aa14.44□□□□□ -0.1
COL6A3-207ENST00000433762 HEMGNQ9BXL5 484 aa14.44□□□□□ -0.1
COL6A3-207ENST00000433762 CD248Q9HCU0 757 aa14.44□□□□□ -0.1
COL6A3-207ENST00000433762 GSTTP1A0A1W2PQM5 241 aa14.44□□□□□ -0.1
COL6A3-207ENST00000433762 ADCY3O60266 1144 aa14.44□□□□□ -0.1
COL6A3-207ENST00000433762 PTPRAP18433 802 aa14.44□□□□□ -0.1
COL6A3-207ENST00000433762 ATP4AP20648 1035 aa14.44□□□□□ -0.1
COL6A3-207ENST00000433762 WNT7BP56706 349 aa14.44□□□□□ -0.1
COL6A3-207ENST00000433762 CBLBQ13191 982 aa14.44□□□□□ -0.1
COL6A3-207ENST00000433762 MPP2Q14168 576 aa14.44□□□□□ -0.1
COL6A3-207ENST00000433762 TRIP13Q15645 432 aaPredicted RBP14.44□□□□□ -0.1
COL6A3-207ENST00000433762 TFDP3Q5H9I0 405 aa14.44□□□□□ -0.1
COL6A3-207ENST00000433762 NOD2Q9HC29 1040 aa14.44□□□□□ -0.1
COL6A3-207ENST00000433762 PICK1Q9NRD5 415 aa14.44□□□□□ -0.1
COL6A3-207ENST00000433762 MCM8Q9UJA3 840 aa14.44□□□□□ -0.1
COL6A3-207ENST00000433762 WDR90Q96KV7 1748 aa14.44□□□□□ -0.1
COL6A3-207ENST00000433762 hCG_1818297A0A087WSY0 165 aa14.43□□□□□ -0.1
COL6A3-207ENST00000433762 RASA4BC9J798 803 aa14.43□□□□□ -0.1
COL6A3-207ENST00000433762 RASA4O43374 803 aa14.43□□□□□ -0.1
COL6A3-207ENST00000433762 TAC1P20366 129 aa14.43□□□□□ -0.1
COL6A3-207ENST00000433762 TMEM63BQ5T3F8 832 aa14.43□□□□□ -0.1
COL6A3-207ENST00000433762 SPOPLQ6IQ16 392 aa14.43□□□□□ -0.1
COL6A3-207ENST00000433762 DNAJC24Q6P3W2 148 aa14.43□□□□□ -0.1
COL6A3-207ENST00000433762 CATSPERGQ6ZRH7 1159 aa14.43□□□□□ -0.1
COL6A3-207ENST00000433762 DENND1AQ8TEH3 1009 aa14.43□□□□□ -0.1
COL6A3-207ENST00000433762 NIF3L1Q9GZT8 377 aa14.43□□□□□ -0.1
COL6A3-207ENST00000433762 ARHGEF3Q9NR81 526 aa14.43□□□□□ -0.1
COL6A3-207ENST00000433762 NRBP2Q9NSY0 501 aa14.43□□□□□ -0.1
COL6A3-207ENST00000433762 HOXC10Q9NYD6 342 aa14.43□□□□□ -0.1
COL6A3-207ENST00000433762 CTNNAL1Q9UBT7 734 aa14.43□□□□□ -0.1
COL6A3-207ENST00000433762 EXOC1LA0A1B0GW35 172 aa14.42□□□□□ -0.1
COL6A3-207ENST00000433762 LRRIQ4A6NIV6 560 aa14.42□□□□□ -0.1
COL6A3-207ENST00000433762 ASMTLO95671 621 aa14.42□□□□□ -0.1
COL6A3-207ENST00000433762 KRT1P04264 644 aa14.42□□□□□ -0.1
COL6A3-207ENST00000433762 CD58P19256 250 aa14.42□□□□□ -0.1
COL6A3-207ENST00000433762 PPARDQ03181 441 aa14.42□□□□□ -0.1
COL6A3-207ENST00000433762 TMEM132BQ14DG7 1078 aa14.42□□□□□ -0.1
COL6A3-207ENST00000433762 LRRC14Q15048 493 aa14.42□□□□□ -0.1
COL6A3-207ENST00000433762 SGSM1Q2NKQ1 1148 aa14.42□□□□□ -0.1
COL6A3-207ENST00000433762 RNASEH2BQ5TBB1 312 aaKnown RBP14.42□□□□□ -0.1
COL6A3-207ENST00000433762 CENPUQ71F23 418 aa14.42□□□□□ -0.1
COL6A3-207ENST00000433762 ASRGL1Q7L266 308 aa14.42□□□□□ -0.1
COL6A3-207ENST00000433762 TRMT1LQ7Z2T5 733 aaKnown RBP14.42□□□□□ -0.1
COL6A3-207ENST00000433762 CYP4X1Q8N118 509 aa14.42□□□□□ -0.1
COL6A3-207ENST00000433762 WNK4Q96J92 1243 aa14.42□□□□□ -0.1
COL6A3-207ENST00000433762 FAM167AQ96KS9 214 aa14.42□□□□□ -0.1
COL6A3-207ENST00000433762 SPON1Q9HCB6 807 aa14.42□□□□□ -0.1
COL6A3-207ENST00000433762 CEP83Q9Y592 693 aa14.42□□□□□ -0.1
COL6A3-207ENST00000433762 LRRC37A2A6NM11 1700 aa14.42□□□□□ -0.1
COL6A3-207ENST00000433762 FAM189A1O60320 539 aa14.42□□□□□ -0.1
COL6A3-207ENST00000433762 ATP2C2O75185 946 aa14.42□□□□□ -0.1
COL6A3-207ENST00000433762 WFS1O76024 890 aa14.42□□□□□ -0.1
COL6A3-207ENST00000433762 CETPP11597 493 aa14.42□□□□□ -0.1
COL6A3-207ENST00000433762 CREB1P16220 341 aa14.42□□□□□ -0.1
COL6A3-207ENST00000433762 DGKZQ13574 1117 aa14.42□□□□□ -0.1
COL6A3-207ENST00000433762 SPARCL1Q14515 664 aa14.42□□□□□ -0.1
COL6A3-207ENST00000433762 TAZQ16635 292 aa14.42□□□□□ -0.1
COL6A3-207ENST00000433762 DALRD3Q5D0E6 543 aaKnown RBP14.42□□□□□ -0.1
COL6A3-207ENST00000433762 FAM160B1Q5W0V3 765 aa14.42□□□□□ -0.1
COL6A3-207ENST00000433762 LMBRD2Q68DH5 695 aaPredicted RBP14.42□□□□□ -0.1
COL6A3-207ENST00000433762 CDCA2Q69YH5 1023 aaPredicted RBP14.42□□□□□ -0.1
COL6A3-207ENST00000433762 SRRM1Q8IYB3 904 aaKnown RBP14.42□□□□□ -0.1
COL6A3-207ENST00000433762 ANKRD42Q8N9B4 389 aa14.42□□□□□ -0.1
COL6A3-207ENST00000433762 SLC35B2Q8TB61 432 aa14.42□□□□□ -0.1
COL6A3-207ENST00000433762 TARS2Q9BW92 718 aaKnown RBP14.42□□□□□ -0.1
COL6A3-207ENST00000433762 LHX5Q9H2C1 402 aa14.42□□□□□ -0.1
COL6A3-207ENST00000433762 ECT2Q9H8V3 914 aa14.42□□□□□ -0.1
COL6A3-207ENST00000433762 SAYSD1Q9NPB0 183 aa14.42□□□□□ -0.1
COL6A3-207ENST00000433762 FBXO40Q9UH90 709 aa14.42□□□□□ -0.1
COL6A3-207ENST00000433762 DNPEPQ9ULA0 475 aa14.42□□□□□ -0.1
COL6A3-207ENST00000433762 ZNF148Q9UQR1 794 aa14.42□□□□□ -0.1
COL6A3-207ENST00000433762 ANK1P16157 1881 aa14.42□□□□□ -0.1
COL6A3-207ENST00000433762 MAFO75444 373 aaPredicted RBP14.41□□□□□ -0.1
COL6A3-207ENST00000433762 TOM1L1O75674 476 aa14.41□□□□□ -0.1
COL6A3-207ENST00000433762 CALCAP01258 141 aa14.41□□□□□ -0.1
COL6A3-207ENST00000433762 CFHP08603 1231 aa14.41□□□□□ -0.1
COL6A3-207ENST00000433762 WEE2P0C1S8 567 aa14.41□□□□□ -0.1
COL6A3-207ENST00000433762 POLR2BP30876 1174 aaKnown RBP14.41□□□□□ -0.1
COL6A3-207ENST00000433762 CDKN2BP42772 138 aa14.41□□□□□ -0.1
COL6A3-207ENST00000433762 YARSP54577 528 aaKnown RBP14.41□□□□□ -0.1
COL6A3-207ENST00000433762 NOL9Q5SY16 702 aaKnown RBP14.41□□□□□ -0.1
COL6A3-207ENST00000433762 LLGL2Q6P1M3 1020 aa14.41□□□□□ -0.1
COL6A3-207ENST00000433762 MFSD7Q6UXD7 560 aa14.41□□□□□ -0.1
COL6A3-207ENST00000433762 OR5B17Q8NGF7 314 aa14.41□□□□□ -0.1
COL6A3-207ENST00000433762 ZNF398Q8TD17 642 aa14.41□□□□□ -0.1
COL6A3-207ENST00000433762 MGARPQ8TDB4 240 aa14.41□□□□□ -0.1
COL6A3-207ENST00000433762 FBF1Q8TES7 1133 aa14.41□□□□□ -0.1
COL6A3-207ENST00000433762 TMEM143Q96AN5 459 aa14.41□□□□□ -0.1
COL6A3-207ENST00000433762 C9orf72Q96LT7 481 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms