RNA–Protein interactions for RNA: ENST00000433369.6

PTPN12-205, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 5

Gene PTPN12, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-205	ENST00000433369	SLC39A12	Q504Y0	691 aa		13.63	□□□□□ -0.23
PTPN12-205	ENST00000433369	OSTM1	Q86WC4	334 aa		13.63	□□□□□ -0.23
PTPN12-205	ENST00000433369	PDCL2	Q8N4E4	241 aa		13.63	□□□□□ -0.23
PTPN12-205	ENST00000433369	PRSS33	Q8NF86	280 aa		13.63	□□□□□ -0.23
PTPN12-205	ENST00000433369	CACTIN	Q8WUQ7	758 aa	Known RBP	13.63	□□□□□ -0.23
PTPN12-205	ENST00000433369	ZNF560	Q96MR9	790 aa		13.63	□□□□□ -0.23
PTPN12-205	ENST00000433369	LRRC3	Q9BY71	257 aa		13.63	□□□□□ -0.23
PTPN12-205	ENST00000433369	PLA2G2F	Q9BZM2	168 aa		13.63	□□□□□ -0.23
PTPN12-205	ENST00000433369	SCAND2P	Q9GZW5	306 aa	Predicted RBP	13.63	□□□□□ -0.23
PTPN12-205	ENST00000433369	AVEN	Q9NQS1	362 aa	Predicted RBP	13.63	□□□□□ -0.23
PTPN12-205	ENST00000433369	TMLHE	Q9NVH6	421 aa		13.63	□□□□□ -0.23
PTPN12-205	ENST00000433369	TMEM191B	P0C7N4	346 aa		13.62	□□□□□ -0.23
PTPN12-205	ENST00000433369	PAX3	P23760	479 aa		13.62	□□□□□ -0.23
PTPN12-205	ENST00000433369	AVPR2	P30518	371 aa		13.62	□□□□□ -0.23
PTPN12-205	ENST00000433369	CASP4	P49662	377 aa		13.62	□□□□□ -0.23
PTPN12-205	ENST00000433369	CYP24A1	Q07973	514 aa		13.62	□□□□□ -0.23
PTPN12-205	ENST00000433369	CWF19L1	Q69YN2	538 aa	Known RBP	13.62	□□□□□ -0.23
PTPN12-205	ENST00000433369	KRBA2	Q6ZNG9	492 aa		13.62	□□□□□ -0.23
PTPN12-205	ENST00000433369	TMC8	Q8IU68	726 aa		13.62	□□□□□ -0.23
PTPN12-205	ENST00000433369	SUGP1	Q8IWZ8	645 aa	Known RBP	13.62	□□□□□ -0.23
PTPN12-205	ENST00000433369	LRRC52	Q8N7C0	313 aa		13.62	□□□□□ -0.23
PTPN12-205	ENST00000433369	TMEM105	Q8N8V8	129 aa		13.62	□□□□□ -0.23
PTPN12-205	ENST00000433369	XXYLT1	Q8NBI6	393 aa		13.62	□□□□□ -0.23
PTPN12-205	ENST00000433369	ZNF516	Q92618	1163 aa		13.62	□□□□□ -0.23
PTPN12-205	ENST00000433369	CCDC127	Q96BQ5	260 aa		13.62	□□□□□ -0.23
PTPN12-205	ENST00000433369	ZSWIM3	Q96MP5	696 aa		13.62	□□□□□ -0.23
PTPN12-205	ENST00000433369	KXD1	Q9BQD3	176 aa		13.62	□□□□□ -0.23
PTPN12-205	ENST00000433369	OXCT2	Q9BYC2	517 aa	Predicted RBP	13.62	□□□□□ -0.23
PTPN12-205	ENST00000433369	KCTD10	Q9H3F6	313 aa		13.62	□□□□□ -0.23
PTPN12-205	ENST00000433369	EXOC1	Q9NV70	894 aa		13.62	□□□□□ -0.23
PTPN12-205	ENST00000433369	USP25	Q9UHP3	1055 aa		13.62	□□□□□ -0.23
PTPN12-205	ENST00000433369	ITGA11	Q9UKX5	1188 aa		13.62	□□□□□ -0.23
PTPN12-205	ENST00000433369	MAFF	Q9ULX9	164 aa		13.62	□□□□□ -0.23
PTPN12-205	ENST00000433369	ATP6V1D	Q9Y5K8	247 aa		13.62	□□□□□ -0.23
PTPN12-205	ENST00000433369	NCAN	O14594	1321 aa		13.62	□□□□□ -0.23
PTPN12-205	ENST00000433369	OBSL1	O75147	1896 aa		13.61	□□□□□ -0.23
PTPN12-205	ENST00000433369	PTPRD	P23468	1912 aa		13.61	□□□□□ -0.23
PTPN12-205	ENST00000433369	PI15	O43692	258 aa		13.61	□□□□□ -0.23
PTPN12-205	ENST00000433369	ZNF202	O95125	648 aa		13.61	□□□□□ -0.23
PTPN12-205	ENST00000433369	CST3	P01034	146 aa	Predicted RBP	13.61	□□□□□ -0.23
PTPN12-205	ENST00000433369	RPN1	P04843	607 aa	Known RBP	13.61	□□□□□ -0.23
PTPN12-205	ENST00000433369	DLAT	P10515	647 aa	Known RBP	13.61	□□□□□ -0.23
PTPN12-205	ENST00000433369	SRF	P11831	508 aa		13.61	□□□□□ -0.23
PTPN12-205	ENST00000433369	MYL4	P12829	197 aa		13.61	□□□□□ -0.23
PTPN12-205	ENST00000433369	FCAR	P24071	287 aa		13.61	□□□□□ -0.23
PTPN12-205	ENST00000433369	ACAT1	P24752	427 aa	Known RBP	13.61	□□□□□ -0.23
PTPN12-205	ENST00000433369	PLA2G5	P39877	138 aa		13.61	□□□□□ -0.23
PTPN12-205	ENST00000433369	PNPLA4	P41247	253 aa		13.61	□□□□□ -0.23
PTPN12-205	ENST00000433369	EPHA5	P54756	1037 aa		13.61	□□□□□ -0.23
PTPN12-205	ENST00000433369	GPC5	P78333	572 aa		13.61	□□□□□ -0.23
PTPN12-205	ENST00000433369	RBP5	P82980	135 aa		13.61	□□□□□ -0.23
PTPN12-205	ENST00000433369	DPYD	Q12882	1025 aa		13.61	□□□□□ -0.23
PTPN12-205	ENST00000433369	PSMD6	Q15008	389 aa		13.61	□□□□□ -0.23
PTPN12-205	ENST00000433369	SOWAHA	Q2M3V2	549 aa		13.61	□□□□□ -0.23
PTPN12-205	ENST00000433369	METTL23	Q86XA0	190 aa		13.61	□□□□□ -0.23
PTPN12-205	ENST00000433369	C12orf56	Q8IXR9	622 aa		13.61	□□□□□ -0.23
PTPN12-205	ENST00000433369	SIX5	Q8N196	739 aa		13.61	□□□□□ -0.23
PTPN12-205	ENST00000433369	STKLD1	Q8NE28	680 aa		13.61	□□□□□ -0.23
PTPN12-205	ENST00000433369	GPR152	Q8TDT2	470 aa		13.61	□□□□□ -0.23
PTPN12-205	ENST00000433369	NXPE3	Q969Y0	559 aa		13.61	□□□□□ -0.23
PTPN12-205	ENST00000433369	ANKRD36BP1	Q96IX9	119 aa		13.61	□□□□□ -0.23
PTPN12-205	ENST00000433369	ZNF512	Q96ME7	567 aa	Predicted RBP	13.61	□□□□□ -0.23
PTPN12-205	ENST00000433369	LPIN3	Q9BQK8	851 aa		13.61	□□□□□ -0.23
PTPN12-205	ENST00000433369	ZNF334	Q9HCZ1	680 aa	Predicted RBP	13.61	□□□□□ -0.23
PTPN12-205	ENST00000433369	DMAC2	Q9NW81	257 aa		13.61	□□□□□ -0.23
PTPN12-205	ENST00000433369	GDAP2	Q9NXN4	497 aa		13.61	□□□□□ -0.23
PTPN12-205	ENST00000433369	FBXL21	Q9UKT6	434 aa		13.61	□□□□□ -0.23
PTPN12-205	ENST00000433369	DSE	Q9UL01	958 aa		13.61	□□□□□ -0.23
PTPN12-205	ENST00000433369	CA14	Q9ULX7	337 aa		13.61	□□□□□ -0.23
PTPN12-205	ENST00000433369	SNX9	Q9Y5X1	595 aa		13.61	□□□□□ -0.23
PTPN12-205	ENST00000433369	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	13.61	□□□□□ -0.23
PTPN12-205	ENST00000433369	MYO15A	Q9UKN7	3530 aa		13.61	□□□□□ -0.23
PTPN12-205	ENST00000433369	DMD	P11532	3685 aa		13.61	□□□□□ -0.23
PTPN12-205	ENST00000433369	GREB1	Q4ZG55	1949 aa		13.6	□□□□□ -0.23
PTPN12-205	ENST00000433369	F5	P12259	2224 aa		13.6	□□□□□ -0.23
PTPN12-205	ENST00000433369	ATF6	P18850	670 aa		13.6	□□□□□ -0.23
PTPN12-205	ENST00000433369	GPR15	P49685	360 aa		13.6	□□□□□ -0.23
PTPN12-205	ENST00000433369	TCF15	Q12870	199 aa		13.6	□□□□□ -0.23
PTPN12-205	ENST00000433369	TEAD2	Q15562	447 aa		13.6	□□□□□ -0.23
PTPN12-205	ENST00000433369	DUOXA2	Q1HG44	320 aa		13.6	□□□□□ -0.23
PTPN12-205	ENST00000433369	FAM78A	Q5JUQ0	283 aa		13.6	□□□□□ -0.23
PTPN12-205	ENST00000433369	STXBP5	Q5T5C0	1151 aa		13.6	□□□□□ -0.23
PTPN12-205	ENST00000433369	TANGO2	Q6ICL3	276 aa		13.6	□□□□□ -0.23
PTPN12-205	ENST00000433369	PDZD4	Q76G19	769 aa	Predicted RBP	13.6	□□□□□ -0.23
PTPN12-205	ENST00000433369	HS2ST1	Q7LGA3	356 aa		13.6	□□□□□ -0.23
PTPN12-205	ENST00000433369	TRAPPC11	Q7Z392	1133 aa		13.6	□□□□□ -0.23
PTPN12-205	ENST00000433369	LIMS2	Q7Z4I7	341 aa		13.6	□□□□□ -0.23
PTPN12-205	ENST00000433369	WDR49	Q8IV35	697 aa		13.6	□□□□□ -0.23
PTPN12-205	ENST00000433369	FLCN	Q8NFG4	579 aa		13.6	□□□□□ -0.23
PTPN12-205	ENST00000433369	SHKBP1	Q8TBC3	707 aa		13.6	□□□□□ -0.23
PTPN12-205	ENST00000433369	ELMO3	Q96BJ8	720 aa		13.6	□□□□□ -0.23
PTPN12-205	ENST00000433369	PKMYT1	Q99640	499 aa		13.6	□□□□□ -0.23
PTPN12-205	ENST00000433369	CGRRF1	Q99675	332 aa		13.6	□□□□□ -0.23
PTPN12-205	ENST00000433369	SEPT5	Q99719	369 aa	Predicted RBP	13.6	□□□□□ -0.23
PTPN12-205	ENST00000433369	KIAA1586	Q9HCI6	787 aa		13.6	□□□□□ -0.23
PTPN12-205	ENST00000433369	DDX43	Q9NXZ2	648 aa	Known RBP	13.6	□□□□□ -0.23
PTPN12-205	ENST00000433369	ARIH1	Q9Y4X5	557 aa	Predicted RBP	13.6	□□□□□ -0.23
PTPN12-205	ENST00000433369	NME7	Q9Y5B8	376 aa		13.6	□□□□□ -0.23
PTPN12-205	ENST00000433369	ZNF638	Q14966	1978 aa	Known RBP	13.6	□□□□□ -0.23
PTPN12-205	ENST00000433369	GABRD	O14764	452 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms