RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 OTUD4Q01804 1114 aaKnown RBP3.96□□□□□ -1.78
SHPRH-205ENST00000433355 PLD1Q13393 1074 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 PRPF4BQ13523 1007 aaKnown RBP3.96□□□□□ -1.78
SHPRH-205ENST00000433355 ACVR2BQ13705 512 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 PSMD6Q15008 389 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 ICE2Q659A1 982 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 LRRC8CQ8TDW0 803 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 OSCP1Q8WVF1 389 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 SOCS4Q8WXH5 440 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 REEP2Q9BRK0 252 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 NIFKQ9BYG3 293 aaKnown RBP3.96□□□□□ -1.78
SHPRH-205ENST00000433355 GPHNQ9NQX3 736 aaPredicted RBP3.96□□□□□ -1.78
SHPRH-205ENST00000433355 ADAMTS1Q9UHI8 967 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 UBIAD1Q9Y5Z9 338 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 CAPN6Q9Y6Q1 641 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 PIKFYVEQ9Y2I7 2098 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 GON4LQ3T8J9 2241 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 ZNF236Q9UL36 1845 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 MYO1CO00159 1063 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 MATN2O00339 956 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 PLEKHA8P1O95397 391 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 CHEK2O96017 543 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 OGNP20774 298 aaKnown RBP3.96□□□□□ -1.78
SHPRH-205ENST00000433355 PPIL2Q13356 520 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 GRM3Q14832 879 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 APOBEC3HQ6NTF7 200 aaKnown RBP3.96□□□□□ -1.78
SHPRH-205ENST00000433355 CHSY1Q86X52 802 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 SIX6OS1Q8N1H7 587 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 LRRC57Q8N9N7 239 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 SLC44A5Q8NCS7 719 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 SCFD1Q8WVM8 642 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 ARHGEF26Q96DR7 871 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 VPS11Q9H270 941 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 ANKFY1Q9P2R3 1169 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 ARHGAP10A1A4S6 786 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 GMNCA6NCL1 334 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 PROSCO94903 275 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 INHBAP08476 426 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 CLDN10P78369 228 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 SFSWAPQ12872 951 aaKnown RBP3.96□□□□□ -1.78
SHPRH-205ENST00000433355 ZKSCAN8Q15776 578 aaPredicted RBP3.96□□□□□ -1.78
SHPRH-205ENST00000433355 ZDHHC20Q5W0Z9 365 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 NSMFQ6X4W1 530 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 NKX2-3Q8TAU0 364 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 TLR10Q9BXR5 811 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 TRIM6Q9C030 488 aaPredicted RBP3.96□□□□□ -1.78
SHPRH-205ENST00000433355 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.96□□□□□ -1.78
SHPRH-205ENST00000433355 TRIOBPQ9H2D6 2365 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 H3BMM5 538 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 MDM4O15151 490 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 MSH4O15457 936 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 KLRC4O43908 158 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 VCPP55072 806 aaKnown RBP3.95□□□□□ -1.78
SHPRH-205ENST00000433355 JAM2P57087 298 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 DYNC1I2Q13409 638 aaKnown RBP3.95□□□□□ -1.78
SHPRH-205ENST00000433355 PPP2R5DQ14738 602 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 DCAF6Q58WW2 860 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 DNAJB8Q8NHS0 232 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 PYROXD1Q8WU10 500 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 C2orf15Q8WU43 125 aaKnown RBP3.95□□□□□ -1.78
SHPRH-205ENST00000433355 UBLCP1Q8WVY7 318 aaPredicted RBP3.95□□□□□ -1.78
SHPRH-205ENST00000433355 XPO6Q96QU8 1125 aaKnown RBP3.95□□□□□ -1.78
SHPRH-205ENST00000433355 AGPAT1Q99943 283 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 NUP85Q9BW27 656 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 PORCNQ9H237 461 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 ARHGAP28Q9P2N2 729 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 AGTPBP1Q9UPW5 1226 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 PIK3R2O00459 728 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 KLHL2O95198 593 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 SRPRAP08240 638 aaKnown RBP3.95□□□□□ -1.78
SHPRH-205ENST00000433355 FOSBP53539 338 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 PLCB3Q01970 1234 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 MAP3K10Q02779 954 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 ZBTB16Q05516 673 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 CCDC153Q494R4 210 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 SNRNP48Q6IEG0 339 aaKnown RBP3.95□□□□□ -1.78
SHPRH-205ENST00000433355 GALNT7Q86SF2 657 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 SLC13A5Q86YT5 568 aaPredicted RBP3.95□□□□□ -1.78
SHPRH-205ENST00000433355 RNF169Q8NCN4 708 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 TOP1MTQ969P6 601 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 CCDC127Q96BQ5 260 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 MAGEB18Q96M61 343 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 INTS2Q9H0H0 1204 aaKnown RBP3.95□□□□□ -1.78
SHPRH-205ENST00000433355 ZNF180Q9UJW8 692 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 DNAJC12Q9UKB3 198 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 ACACAQ13085 2346 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 TRPC5OSA6NMA1 111 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 KATNA1O75449 491 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 ZBED1O96006 694 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 EIF2S1P05198 315 aaKnown RBP3.95□□□□□ -1.78
SHPRH-205ENST00000433355 FCER1AP12319 257 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 MAP2K2P36507 400 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 SLC12A2P55011 1212 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 CYP24A1Q07973 514 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 PARP6Q2NL67 630 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 STRADAQ7RTN6 431 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 NRBF2Q96F24 287 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 MYL10Q9BUA6 226 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 CEP44Q9C0F1 390 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 SLC39A2Q9NP94 309 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms