RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 RBP5P82980 135 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 YWHAHQ04917 246 aaPredicted RBP6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 CYP24A1Q07973 514 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 BFSP1Q12934 665 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 ADAM9Q13443 819 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 SMAD4Q13485 552 aaKnown RBP6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 KCNB1Q14721 858 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 SURF1Q15526 300 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 SMAD2Q15796 467 aaKnown RBP6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 DUOXA2Q1HG44 320 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 PPM1LQ5SGD2 360 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 ZNF658Q5TYW1 1059 aaPredicted RBP6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 ANKRD40Q6AI12 368 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 OVOS1Q6IE37 1185 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 PDXDC1Q6P996 788 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 LILRA6Q6PI73 481 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 ANKS3Q6ZW76 656 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 METTL23Q86XA0 190 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 NT5DC4Q86YG4 428 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 GJD3Q8N144 294 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 SMRP1Q8NCR6 262 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 APPL2Q8NEU8 664 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 ST13P5Q8NFI4 369 aaPredicted RBP6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 ZNF461Q8TAF7 563 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 BORCS6Q96GS4 357 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 POM121Q96HA1 1249 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 ANKRD36BP1Q96IX9 119 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 MFSD14AQ96MC6 490 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 PGLYRP2Q96PD5 576 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 GSDMAQ96QA5 445 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 TSPAN18Q96SJ8 248 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 TMEM209Q96SK2 561 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 MTMR12Q9C0I1 747 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 ADAM7Q9H2U9 754 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 MMRN2Q9H8L6 949 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 CYP4F11Q9HBI6 524 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 INTS13Q9NVM9 706 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 RMND1Q9NWS8 449 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 MAP10Q9P2G4 905 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 MTRRQ9UBK8 725 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 FBXL5Q9UKA1 691 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 MAN1B1Q9UKM7 699 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 FAM50BQ9Y247 325 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 C2CD2Q9Y426 696 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 SZT2Q5T011 3432 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 UBE4BO95155 1302 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 RANBP2P49792 3224 aaKnown RBP6.21□□□□□ -1.41
HMGB3P24-201ENST00000433260 FSD2A1L4K1 749 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 WDR27A2RRH5 827 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 TRIM49BA6NDI0 452 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 TNFRSF10AO00220 468 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 SYN3O14994 580 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 CCL16O15467 120 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 HCRTO43612 131 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 SEC24AO95486 1093 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 C8AP07357 584 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 ODC1P11926 461 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 NR2F2P24468 414 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 ACAT1P24752 427 aaKnown RBP6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 ELF1P32519 619 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 NTHL1P78549 312 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 POU5F1Q01860 360 aaKnown RBP6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 ROR1Q01973 937 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 CREMQ03060 361 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 ITIH3Q06033 890 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 ADCY1Q08828 1119 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 BIRC3Q13489 604 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 TRPC3Q13507 836 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 RAB33AQ14088 237 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 MRPL58Q14197 206 aaKnown RBP6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 CBX2Q14781 532 aaPredicted RBP6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 PSMD6Q15008 389 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 SV2CQ496J9 727 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 WSCD1Q658N2 575 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 ZNF280DQ6N043 979 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 TRAPPC11Q7Z392 1133 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 GPR149Q86SP6 731 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 CREBRFQ8IUR6 639 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 WDR49Q8IV35 697 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 THEM5Q8N1Q8 247 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 GUF1Q8N442 669 aaKnown RBP6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 C1orf127Q8N9H9 656 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 GOLGA5Q8TBA6 731 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 SLC7A14Q8TBB6 771 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 PLEKHO2Q8TD55 490 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 SMG7Q92540 1137 aaKnown RBP6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 ZNF592Q92610 1267 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 HPDLQ96IR7 371 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 RIPOR3Q96MK2 946 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 MMS19Q96T76 1030 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 CGRRF1Q99675 332 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 PHF7Q9BWX1 381 aaPredicted RBP6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 POMKQ9H5K3 350 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 SFXN1Q9H9B4 322 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 DZANK1Q9NVP4 752 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 DMAC2Q9NW81 257 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 PLA2G2EQ9NZK7 142 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 CGNQ9P2M7 1197 aaKnown RBP6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 NXF1Q9UBU9 619 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms