RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 DNAJC25Q9H1X3 360 aa17.24■□□□□ 0.35
NUP50-209ENST00000432340 CXCL16Q9H2A7 254 aa17.24■□□□□ 0.35
NUP50-209ENST00000432340 HPS4Q9NQG7 708 aa17.24■□□□□ 0.35
NUP50-209ENST00000432340 CIZ1Q9ULV3 898 aaPredicted RBP17.24■□□□□ 0.35
NUP50-209ENST00000432340 ACACAQ13085 2346 aa17.24■□□□□ 0.35
NUP50-209ENST00000432340 A0A087WV48 116 aa17.23■□□□□ 0.35
NUP50-209ENST00000432340 ATXN7O15265 892 aaPredicted RBP17.23■□□□□ 0.35
NUP50-209ENST00000432340 USO1O60763 962 aaKnown RBP17.23■□□□□ 0.35
NUP50-209ENST00000432340 SERPINF2P08697 491 aa17.23■□□□□ 0.35
NUP50-209ENST00000432340 FTH1P19P0C7X4 201 aa17.23■□□□□ 0.35
NUP50-209ENST00000432340 LIG1P18858 919 aa17.23■□□□□ 0.35
NUP50-209ENST00000432340 TUFMP49411 452 aaKnown RBP17.23■□□□□ 0.35
NUP50-209ENST00000432340 INF2Q27J81 1249 aa17.23■□□□□ 0.35
NUP50-209ENST00000432340 ATF7IP2Q5U623 682 aa17.23■□□□□ 0.35
NUP50-209ENST00000432340 CMTM8Q8IZV2 173 aa17.23■□□□□ 0.35
NUP50-209ENST00000432340 POLR3BQ9NW08 1133 aaPredicted RBP17.23■□□□□ 0.35
NUP50-209ENST00000432340 TBX20Q9UMR3 447 aa17.23■□□□□ 0.35
NUP50-209ENST00000432340 RAI2Q9Y5P3 530 aa17.23■□□□□ 0.35
NUP50-209ENST00000432340 STK24Q9Y6E0 443 aa17.23■□□□□ 0.35
NUP50-209ENST00000432340 SMG1Q96Q15 3661 aaKnown RBP17.23■□□□□ 0.35
NUP50-209ENST00000432340 NID2Q14112 1375 aa17.23■□□□□ 0.35
NUP50-209ENST00000432340 AKAP13Q12802 2813 aa17.22■□□□□ 0.35
NUP50-209ENST00000432340 J3QKU1 62 aa17.22■□□□□ 0.35
NUP50-209ENST00000432340 KCNE1P15382 129 aa17.22■□□□□ 0.35
NUP50-209ENST00000432340 GRM5P41594 1212 aa17.22■□□□□ 0.35
NUP50-209ENST00000432340 ABCG1P45844 678 aa17.22■□□□□ 0.35
NUP50-209ENST00000432340 XKR4Q5GH76 650 aa17.22■□□□□ 0.35
NUP50-209ENST00000432340 MINDY1Q8N5J2 469 aa17.22■□□□□ 0.35
NUP50-209ENST00000432340 PGLYRP2Q96PD5 576 aa17.22■□□□□ 0.35
NUP50-209ENST00000432340 EIF2AK1Q9BQI3 630 aaKnown RBP17.22■□□□□ 0.35
NUP50-209ENST00000432340 DNAAF2Q9NVR5 837 aaKnown RBP17.22■□□□□ 0.35
NUP50-209ENST00000432340 MBD1Q9UIS9 605 aaPredicted RBP17.22■□□□□ 0.35
NUP50-209ENST00000432340 PILRBQ9UKJ0 227 aa17.22■□□□□ 0.35
NUP50-209ENST00000432340 AP5Z1O43299 807 aa17.21■□□□□ 0.35
NUP50-209ENST00000432340 CCNT1O60563 726 aaKnown RBP17.21■□□□□ 0.35
NUP50-209ENST00000432340 ATP2B1P20020 1258 aa17.21■□□□□ 0.35
NUP50-209ENST00000432340 GJA4P35212 333 aa17.21■□□□□ 0.35
NUP50-209ENST00000432340 NAMPTP43490 491 aa17.21■□□□□ 0.35
NUP50-209ENST00000432340 FAM193AP78312 1265 aa17.21■□□□□ 0.35
NUP50-209ENST00000432340 SOX4Q06945 474 aaPredicted RBP17.21■□□□□ 0.35
NUP50-209ENST00000432340 MYBPC2Q14324 1141 aa17.21■□□□□ 0.35
NUP50-209ENST00000432340 TSGA10IPQ3SY00 556 aa17.21■□□□□ 0.35
NUP50-209ENST00000432340 PEAR1Q5VY43 1037 aaPredicted RBP17.21■□□□□ 0.35
NUP50-209ENST00000432340 CENPPQ6IPU0 288 aa17.21■□□□□ 0.35
NUP50-209ENST00000432340 ARMCX5Q6P1M9 558 aa17.21■□□□□ 0.35
NUP50-209ENST00000432340 MAEAQ7L5Y9 396 aa17.21■□□□□ 0.35
NUP50-209ENST00000432340 OLIG1Q8TAK6 271 aa17.21■□□□□ 0.35
NUP50-209ENST00000432340 ATP2A3Q93084 1043 aa17.21■□□□□ 0.35
NUP50-209ENST00000432340 HSD17B14Q9BPX1 270 aa17.21■□□□□ 0.35
NUP50-209ENST00000432340 TDP1Q9NUW8 608 aa17.21■□□□□ 0.35
NUP50-209ENST00000432340 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.2■□□□□ 0.34
NUP50-209ENST00000432340 ARHGAP33O14559 1287 aa17.2■□□□□ 0.34
NUP50-209ENST00000432340 P2RY2P41231 377 aa17.2■□□□□ 0.34
NUP50-209ENST00000432340 CRY1Q16526 586 aa17.2■□□□□ 0.34
NUP50-209ENST00000432340 HSF5Q4G112 596 aaPredicted RBP17.2■□□□□ 0.34
NUP50-209ENST00000432340 EEF1DP3Q658K8 133 aa17.2■□□□□ 0.34
NUP50-209ENST00000432340 TRIM68Q6AZZ1 485 aa17.2■□□□□ 0.34
NUP50-209ENST00000432340 ALKAL1Q6UXT8 129 aa17.2■□□□□ 0.34
NUP50-209ENST00000432340 ARMCX6Q7L4S7 300 aa17.2■□□□□ 0.34
NUP50-209ENST00000432340 TTC30AQ86WT1 665 aa17.2■□□□□ 0.34
NUP50-209ENST00000432340 TMEFF1Q8IYR6 380 aa17.2■□□□□ 0.34
NUP50-209ENST00000432340 MDGA1Q8NFP4 955 aa17.2■□□□□ 0.34
NUP50-209ENST00000432340 HAS1Q92839 578 aa17.2■□□□□ 0.34
NUP50-209ENST00000432340 CHFRQ96EP1 664 aa17.2■□□□□ 0.34
NUP50-209ENST00000432340 IFT74Q96LB3 600 aa17.2■□□□□ 0.34
NUP50-209ENST00000432340 ACAP3Q96P50 834 aa17.2■□□□□ 0.34
NUP50-209ENST00000432340 POLR3CQ9BUI4 534 aaPredicted RBP17.2■□□□□ 0.34
NUP50-209ENST00000432340 ECT2Q9H8V3 914 aa17.2■□□□□ 0.34
NUP50-209ENST00000432340 FBRSL1Q9HCM7 1045 aaKnown RBP17.2■□□□□ 0.34
NUP50-209ENST00000432340 POLMQ9NP87 494 aaPredicted RBP17.2■□□□□ 0.34
NUP50-209ENST00000432340 TMEM74BQ9NUR3 256 aa17.2■□□□□ 0.34
NUP50-209ENST00000432340 KIAA1522Q9P206 1035 aaPredicted RBP17.2■□□□□ 0.34
NUP50-209ENST00000432340 BCCIPQ9P287 314 aaKnown RBP eCLIP17.2■□□□□ 0.34
NUP50-209ENST00000432340 MMP17Q9ULZ9 603 aa17.2■□□□□ 0.34
NUP50-209ENST00000432340 APC2O95996 2303 aa17.2■□□□□ 0.34
NUP50-209ENST00000432340 ASXL3Q9C0F0 2248 aa17.2■□□□□ 0.34
NUP50-209ENST00000432340 PCNX2A6NKB5 2137 aa17.2■□□□□ 0.34
NUP50-209ENST00000432340 PHLPP2Q6ZVD8 1323 aa17.2■□□□□ 0.34
NUP50-209ENST00000432340 VWA8A3KMH1 1905 aa17.19■□□□□ 0.34
NUP50-209ENST00000432340 ASCC3Q8N3C0 2202 aaKnown RBP17.19■□□□□ 0.34
NUP50-209ENST00000432340 OTOL1A6NHN0 477 aaPredicted RBP17.19■□□□□ 0.34
NUP50-209ENST00000432340 TTLL13PA6NNM8 815 aa17.19■□□□□ 0.34
NUP50-209ENST00000432340 M0R2N6 131 aa17.19■□□□□ 0.34
NUP50-209ENST00000432340 DEXIO95424 95 aa17.19■□□□□ 0.34
NUP50-209ENST00000432340 CD59P13987 128 aa17.19■□□□□ 0.34
NUP50-209ENST00000432340 PTGER3P43115 390 aa17.19■□□□□ 0.34
NUP50-209ENST00000432340 SSRP1Q08945 709 aaKnown RBP17.19■□□□□ 0.34
NUP50-209ENST00000432340 ZNF268Q14587 947 aaPredicted RBP17.19■□□□□ 0.34
NUP50-209ENST00000432340 NTRK3Q16288 839 aa17.19■□□□□ 0.34
NUP50-209ENST00000432340 SLC36A4Q6YBV0 504 aa17.19■□□□□ 0.34
NUP50-209ENST00000432340 TOGARAM2Q6ZUX3 1019 aa17.19■□□□□ 0.34
NUP50-209ENST00000432340 USP33Q8TEY7 942 aa17.19■□□□□ 0.34
NUP50-209ENST00000432340 ESYT1Q9BSJ8 1104 aa17.19■□□□□ 0.34
NUP50-209ENST00000432340 SLC46A2Q9BY10 475 aa17.19■□□□□ 0.34
NUP50-209ENST00000432340 CCDC113Q9H0I3 377 aa17.19■□□□□ 0.34
NUP50-209ENST00000432340 GPRC5CQ9NQ84 441 aa17.19■□□□□ 0.34
NUP50-209ENST00000432340 IGSF5Q9NSI5 407 aa17.19■□□□□ 0.34
NUP50-209ENST00000432340 PCDHA12Q9UN75 941 aa17.19■□□□□ 0.34
NUP50-209ENST00000432340 TNFSF13BQ9Y275 285 aa17.19■□□□□ 0.34
NUP50-209ENST00000432340 NBEAQ8NFP9 2946 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms