RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 MOXD1Q6UVY6 613 aa8.55□□□□□ -1.04
VTI1A-202ENST00000432306 SPATA21Q7Z572 469 aa8.55□□□□□ -1.04
VTI1A-202ENST00000432306 ERICH1Q86X53 443 aa8.55□□□□□ -1.04
VTI1A-202ENST00000432306 AGGF1Q8N302 714 aaeCLIP8.55□□□□□ -1.04
VTI1A-202ENST00000432306 FITM2Q8N6M3 262 aa8.55□□□□□ -1.04
VTI1A-202ENST00000432306 ANKLE1Q8NAG6 615 aa8.55□□□□□ -1.04
VTI1A-202ENST00000432306 LNX1Q8TBB1 728 aaPredicted RBP8.55□□□□□ -1.04
VTI1A-202ENST00000432306 GRAPLQ8TC17 118 aaPredicted RBP8.55□□□□□ -1.04
VTI1A-202ENST00000432306 HAS1Q92839 578 aa8.55□□□□□ -1.04
VTI1A-202ENST00000432306 SLC35C1Q96A29 364 aa8.55□□□□□ -1.04
VTI1A-202ENST00000432306 CDCA5Q96FF9 252 aa8.55□□□□□ -1.04
VTI1A-202ENST00000432306 SELENOSQ9BQE4 189 aa8.55□□□□□ -1.04
VTI1A-202ENST00000432306 SEMA4AQ9H3S1 761 aa8.55□□□□□ -1.04
VTI1A-202ENST00000432306 GOLPH3Q9H4A6 298 aa8.55□□□□□ -1.04
VTI1A-202ENST00000432306 RNPEPL1Q9HAU8 725 aa8.55□□□□□ -1.04
VTI1A-202ENST00000432306 TXLNGQ9NUQ3 528 aa8.55□□□□□ -1.04
VTI1A-202ENST00000432306 OBP2AQ9NY56 170 aa8.55□□□□□ -1.04
VTI1A-202ENST00000432306 GTF2IRD1Q9UHL9 959 aa8.55□□□□□ -1.04
VTI1A-202ENST00000432306 DGKBQ9Y6T7 804 aa8.55□□□□□ -1.04
VTI1A-202ENST00000432306 PSME4Q14997 1843 aa8.55□□□□□ -1.04
VTI1A-202ENST00000432306 PDPK1O15530 556 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 CALUO43852 315 aaPredicted RBP8.54□□□□□ -1.04
VTI1A-202ENST00000432306 ECE2O60344 883 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 FZD6O60353 706 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 HNRNPCL1O60812 293 aaKnown RBP8.54□□□□□ -1.04
VTI1A-202ENST00000432306 ATP2C2O75185 946 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 TSPY3P0CV98 308 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 TSPY8P0CW00 308 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 ATP6V1C1P21283 382 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 NR2F2P24468 414 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 SERPINB3P29508 390 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 GCLCP48506 637 aaPredicted RBP8.54□□□□□ -1.04
VTI1A-202ENST00000432306 SLC12A3P55017 1021 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 SLC5A9Q2M3M2 681 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 WASHC2DQ5SRD0 308 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 RHBDF2Q6PJF5 856 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 SNX32Q86XE0 403 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.54□□□□□ -1.04
VTI1A-202ENST00000432306 PRELID2Q8N945 189 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 SLC35G2Q8TBE7 412 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 IFT43Q96FT9 208 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 MAGEB18Q96M61 343 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 CFHR5Q9BXR6 569 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 FGFBP2Q9BYJ0 223 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 STK33Q9BYT3 514 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 TLE6Q9H808 572 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 KIF9Q9HAQ2 790 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 ERVK-5Q9HDB9 667 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 EVA1BQ9NVM1 165 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 MCM9Q9NXL9 1143 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 EURLQ9NYK6 297 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 GGA3Q9NZ52 723 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 WHRNQ9P202 907 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.54□□□□□ -1.04
VTI1A-202ENST00000432306 SEC63Q9UGP8 760 aaKnown RBP8.54□□□□□ -1.04
VTI1A-202ENST00000432306 PPP1R9AQ9ULJ8 1098 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 MINPP1Q9UNW1 487 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 ADGRA3Q8IWK6 1321 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 SCN9AQ15858 1988 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 DDX60LQ5H9U9 1706 aaKnown RBP8.54□□□□□ -1.04
VTI1A-202ENST00000432306 CYP3A7-CYP3A51PA0A087WV96 503 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 SFI1A8K8P3 1242 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 GPR25O00155 361 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 PLA2G4BP0C869 781 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 TPBGLP0DKB5 382 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 NEFHP12036 1026 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 ACTN1P12814 892 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 ATP4AP20648 1035 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 CYP3A7P24462 503 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 RPL21P46778 160 aaKnown RBP8.54□□□□□ -1.04
VTI1A-202ENST00000432306 RENBPP51606 427 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 PLTPP55058 493 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 TRAF1Q13077 416 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 PDCD2Q16342 344 aaPredicted RBP8.54□□□□□ -1.04
VTI1A-202ENST00000432306 CWF19L1Q69YN2 538 aaKnown RBP8.54□□□□□ -1.04
VTI1A-202ENST00000432306 ANO7Q6IWH7 933 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 PASD1Q8IV76 773 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 KIRREL3Q8IZU9 778 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 GALNT15Q8N3T1 639 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 APPL2Q8NEU8 664 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 TMEM174Q8WUU8 243 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 UTP4Q969X6 686 aaKnown RBP8.54□□□□□ -1.04
VTI1A-202ENST00000432306 EYA3Q99504 573 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 LRRC19Q9H756 370 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 DBNDD1Q9H9R9 158 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 CYP39A1Q9NYL5 469 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 KLHL14Q9P2G3 628 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 EFR3BQ9Y2G0 817 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 STARD13Q9Y3M8 1113 aa8.54□□□□□ -1.04
VTI1A-202ENST00000432306 TMEM120BA0PK00 339 aa8.53□□□□□ -1.04
VTI1A-202ENST00000432306 TP73O15350 636 aa8.53□□□□□ -1.04
VTI1A-202ENST00000432306 FKTNO75072 461 aa8.53□□□□□ -1.04
VTI1A-202ENST00000432306 PEX11AO75192 247 aa8.53□□□□□ -1.04
VTI1A-202ENST00000432306 RFPL1O75677 317 aa8.53□□□□□ -1.04
VTI1A-202ENST00000432306 TDP2O95551 362 aa8.53□□□□□ -1.04
VTI1A-202ENST00000432306 EGFRP00533 1210 aa8.53□□□□□ -1.04
VTI1A-202ENST00000432306 LMNAP02545 664 aaKnown RBP8.53□□□□□ -1.04
VTI1A-202ENST00000432306 RPL13P26373 211 aaKnown RBP8.53□□□□□ -1.04
VTI1A-202ENST00000432306 PEX5P50542 639 aa8.53□□□□□ -1.04
VTI1A-202ENST00000432306 ADCY7P51828 1080 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms