RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 EMC10Q5UCC4 262 aa13.63□□□□□ -0.23
DDX56-204ENST00000431640 SYDE1Q6ZW31 735 aaPredicted RBP13.63□□□□□ -0.23
DDX56-204ENST00000431640 RHOT1Q8IXI2 618 aa13.63□□□□□ -0.23
DDX56-204ENST00000431640 THNSL1Q8IYQ7 743 aa13.63□□□□□ -0.23
DDX56-204ENST00000431640 TMEM35BQ8NCS4 154 aa13.63□□□□□ -0.23
DDX56-204ENST00000431640 FEZF2Q8TBJ5 459 aa13.63□□□□□ -0.23
DDX56-204ENST00000431640 KAT2BQ92831 832 aa13.63□□□□□ -0.23
DDX56-204ENST00000431640 ZBTB10Q96DT7 871 aa13.63□□□□□ -0.23
DDX56-204ENST00000431640 FAM84AQ96KN4 292 aa13.63□□□□□ -0.23
DDX56-204ENST00000431640 FMO2Q99518 471 aa13.63□□□□□ -0.23
DDX56-204ENST00000431640 MTMR12Q9C0I1 747 aa13.63□□□□□ -0.23
DDX56-204ENST00000431640 DPH5Q9H2P9 285 aa13.63□□□□□ -0.23
DDX56-204ENST00000431640 RNPEPQ9H4A4 650 aa13.63□□□□□ -0.23
DDX56-204ENST00000431640 IP6K2Q9UHH9 426 aa13.63□□□□□ -0.23
DDX56-204ENST00000431640 PLAAQ9Y263 795 aa13.63□□□□□ -0.23
DDX56-204ENST00000431640 CEP83Q9Y592 693 aa13.63□□□□□ -0.23
DDX56-204ENST00000431640 FAM170AA1A519 330 aa13.62□□□□□ -0.23
DDX56-204ENST00000431640 ERICH4A6NGS2 130 aa13.62□□□□□ -0.23
DDX56-204ENST00000431640 ZEB2O60315 1214 aa13.62□□□□□ -0.23
DDX56-204ENST00000431640 DUSP11O75319 330 aaKnown RBP13.62□□□□□ -0.23
DDX56-204ENST00000431640 EIF4BP23588 611 aaKnown RBP13.62□□□□□ -0.23
DDX56-204ENST00000431640 EIF3BP55884 814 aaKnown RBP13.62□□□□□ -0.23
DDX56-204ENST00000431640 SKOR1P84550 965 aa13.62□□□□□ -0.23
DDX56-204ENST00000431640 MAMLD1Q13495 774 aa13.62□□□□□ -0.23
DDX56-204ENST00000431640 MTFR1Q15390 333 aa13.62□□□□□ -0.23
DDX56-204ENST00000431640 ZNF699Q32M78 642 aa13.62□□□□□ -0.23
DDX56-204ENST00000431640 CCDC105Q8IYK2 499 aa13.62□□□□□ -0.23
DDX56-204ENST00000431640 TRAPPC12Q8WVT3 735 aa13.62□□□□□ -0.23
DDX56-204ENST00000431640 SLCO2A1Q92959 643 aa13.62□□□□□ -0.23
DDX56-204ENST00000431640 ZBTB9Q96C00 473 aa13.62□□□□□ -0.23
DDX56-204ENST00000431640 C11orf70Q9BRQ4 267 aa13.62□□□□□ -0.23
DDX56-204ENST00000431640 ASB7Q9H672 318 aa13.62□□□□□ -0.23
DDX56-204ENST00000431640 CISHQ9NSE2 258 aa13.62□□□□□ -0.23
DDX56-204ENST00000431640 MTRF1LQ9UGC7 380 aaKnown RBP13.62□□□□□ -0.23
DDX56-204ENST00000431640 PCDHGC3Q9UN70 934 aa13.62□□□□□ -0.23
DDX56-204ENST00000431640 MED7O43513 233 aa13.62□□□□□ -0.23
DDX56-204ENST00000431640 PPFIA2O75334 1257 aa13.62□□□□□ -0.23
DDX56-204ENST00000431640 CALCAP01258 141 aa13.62□□□□□ -0.23
DDX56-204ENST00000431640 MYZAPP0CAP1 466 aa13.62□□□□□ -0.23
DDX56-204ENST00000431640 RARAP10276 462 aa13.62□□□□□ -0.23
DDX56-204ENST00000431640 MMP8P22894 467 aa13.62□□□□□ -0.23
DDX56-204ENST00000431640 ATICP31939 592 aa13.62□□□□□ -0.23
DDX56-204ENST00000431640 CLCN3P51790 818 aa13.62□□□□□ -0.23
DDX56-204ENST00000431640 GJA9P57773 515 aa13.62□□□□□ -0.23
DDX56-204ENST00000431640 NKX3-2P78367 333 aa13.62□□□□□ -0.23
DDX56-204ENST00000431640 CDC42EP1Q00587 391 aa13.62□□□□□ -0.23
DDX56-204ENST00000431640 DHX9Q08211 1270 aaKnown RBP13.62□□□□□ -0.23
DDX56-204ENST00000431640 LHX8Q68G74 356 aa13.62□□□□□ -0.23
DDX56-204ENST00000431640 AADACL2Q6P093 401 aa13.62□□□□□ -0.23
DDX56-204ENST00000431640 TMC3Q7Z5M5 1100 aa13.62□□□□□ -0.23
DDX56-204ENST00000431640 CROCCP2Q86T23 111 aa13.62□□□□□ -0.23
DDX56-204ENST00000431640 LINC01465Q8N7H1 131 aa13.62□□□□□ -0.23
DDX56-204ENST00000431640 GRK7Q8WTQ7 553 aa13.62□□□□□ -0.23
DDX56-204ENST00000431640 ARL8AQ96BM9 186 aa13.62□□□□□ -0.23
DDX56-204ENST00000431640 C18orf8Q96DM3 657 aa13.62□□□□□ -0.23
DDX56-204ENST00000431640 ATP6V1G3Q96LB4 118 aa13.62□□□□□ -0.23
DDX56-204ENST00000431640 TRIM51Q9BSJ1 452 aa13.62□□□□□ -0.23
DDX56-204ENST00000431640 UNC93B1Q9H1C4 597 aa13.62□□□□□ -0.23
DDX56-204ENST00000431640 CDT1Q9H211 546 aa13.62□□□□□ -0.23
DDX56-204ENST00000431640 NEUROG2Q9H2A3 272 aa13.62□□□□□ -0.23
DDX56-204ENST00000431640 FAM124BQ9H5Z6 455 aaPredicted RBP13.62□□□□□ -0.23
DDX56-204ENST00000431640 IFT122Q9HBG6 1241 aa13.62□□□□□ -0.23
DDX56-204ENST00000431640 DDX20Q9UHI6 824 aaKnown RBP13.62□□□□□ -0.23
DDX56-204ENST00000431640 SCN10AQ9Y5Y9 1956 aa13.61□□□□□ -0.23
DDX56-204ENST00000431640 UMODL1Q5DID0 1318 aa13.61□□□□□ -0.23
DDX56-204ENST00000431640 TLR3O15455 904 aaKnown RBP13.61□□□□□ -0.23
DDX56-204ENST00000431640 SHOX2O60902 331 aaPredicted RBP13.61□□□□□ -0.23
DDX56-204ENST00000431640 ECEL1O95672 775 aa13.61□□□□□ -0.23
DDX56-204ENST00000431640 F2P00734 622 aa13.61□□□□□ -0.23
DDX56-204ENST00000431640 MYCP01106 439 aaPredicted RBP13.61□□□□□ -0.23
DDX56-204ENST00000431640 KRT14P02533 472 aa13.61□□□□□ -0.23
DDX56-204ENST00000431640 POLR2BP30876 1174 aaKnown RBP13.61□□□□□ -0.23
DDX56-204ENST00000431640 CDH5P33151 784 aaPredicted RBP13.61□□□□□ -0.23
DDX56-204ENST00000431640 IGBP1P78318 339 aa13.61□□□□□ -0.23
DDX56-204ENST00000431640 HIC1Q14526 733 aa13.61□□□□□ -0.23
DDX56-204ENST00000431640 SIX1Q15475 284 aaPredicted RBP13.61□□□□□ -0.23
DDX56-204ENST00000431640 ZSCAN26Q16670 478 aa13.61□□□□□ -0.23
DDX56-204ENST00000431640 SGO2Q562F6 1265 aa13.61□□□□□ -0.23
DDX56-204ENST00000431640 TTMPQ5BVD1 217 aa13.61□□□□□ -0.23
DDX56-204ENST00000431640 ZNF667Q5HYK9 610 aa13.61□□□□□ -0.23
DDX56-204ENST00000431640 CEP85LQ5SZL2 805 aa13.61□□□□□ -0.23
DDX56-204ENST00000431640 CCSAPQ6IQ19 270 aaPredicted RBP13.61□□□□□ -0.23
DDX56-204ENST00000431640 MMS22LQ6ZRQ5 1243 aa13.61□□□□□ -0.23
DDX56-204ENST00000431640 APBB1IPQ7Z5R6 666 aaPredicted RBP13.61□□□□□ -0.23
DDX56-204ENST00000431640 NT5DC4Q86YG4 428 aa13.61□□□□□ -0.23
DDX56-204ENST00000431640 KATNAL2Q8IYT4 538 aa13.61□□□□□ -0.23
DDX56-204ENST00000431640 ARFGAP2Q8N6H7 521 aa13.61□□□□□ -0.23
DDX56-204ENST00000431640 UBLCP1Q8WVY7 318 aaPredicted RBP13.61□□□□□ -0.23
DDX56-204ENST00000431640 CAPS2Q9BXY5 557 aa13.61□□□□□ -0.23
DDX56-204ENST00000431640 TRIM31Q9BZY9 425 aa13.61□□□□□ -0.23
DDX56-204ENST00000431640 TSPYL1Q9H0U9 437 aa13.61□□□□□ -0.23
DDX56-204ENST00000431640 TMBIM4Q9HC24 238 aa13.61□□□□□ -0.23
DDX56-204ENST00000431640 ZDHHC18Q9NUE0 388 aa13.61□□□□□ -0.23
DDX56-204ENST00000431640 STRIP2Q9ULQ0 834 aa13.61□□□□□ -0.23
DDX56-204ENST00000431640 Q9Y3F1 56 aa13.61□□□□□ -0.23
DDX56-204ENST00000431640 H0YGN5 161 aa13.6□□□□□ -0.23
DDX56-204ENST00000431640 H3BRB1 525 aa13.6□□□□□ -0.23
DDX56-204ENST00000431640 PAEPP09466 180 aa13.6□□□□□ -0.23
DDX56-204ENST00000431640 C6orf222P0C671 652 aaPredicted RBP13.6□□□□□ -0.23
DDX56-204ENST00000431640 STAG3L1P0CL83 205 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms