RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 CTSHP09668 335 aa15.2■□□□□ 0.02
CALD1-207ENST00000430085 ATF7P17544 494 aaPredicted RBP15.2■□□□□ 0.02
CALD1-207ENST00000430085 RAD23BP54727 409 aa15.2■□□□□ 0.02
CALD1-207ENST00000430085 VSNL1P62760 191 aa15.2■□□□□ 0.02
CALD1-207ENST00000430085 C8orf74Q6P047 294 aa15.2■□□□□ 0.02
CALD1-207ENST00000430085 CC2D1AQ6P1N0 951 aaPredicted RBP15.2■□□□□ 0.02
CALD1-207ENST00000430085 WDR93Q6P2C0 686 aa15.2■□□□□ 0.02
CALD1-207ENST00000430085 RNF180Q86T96 592 aa15.2■□□□□ 0.02
CALD1-207ENST00000430085 RASGEF1CQ8N431 466 aa15.2■□□□□ 0.02
CALD1-207ENST00000430085 C1orf131Q8NDD1 294 aaKnown RBP15.2■□□□□ 0.02
CALD1-207ENST00000430085 TFAP2BQ92481 460 aa15.2■□□□□ 0.02
CALD1-207ENST00000430085 TMEM176AQ96HP8 235 aa15.2■□□□□ 0.02
CALD1-207ENST00000430085 TSPAN18Q96SJ8 248 aa15.2■□□□□ 0.02
CALD1-207ENST00000430085 ZSWIM1Q9BR11 485 aa15.2■□□□□ 0.02
CALD1-207ENST00000430085 KLK14Q9P0G3 267 aa15.2■□□□□ 0.02
CALD1-207ENST00000430085 TUBGCP4Q9UGJ1 667 aa15.2■□□□□ 0.02
CALD1-207ENST00000430085 IPPQ9Y573 584 aa15.2■□□□□ 0.02
CALD1-207ENST00000430085 MYO1FO00160 1098 aa15.19■□□□□ 0.02
CALD1-207ENST00000430085 MYCP01106 439 aaPredicted RBP15.19■□□□□ 0.02
CALD1-207ENST00000430085 CD4P01730 458 aa15.19■□□□□ 0.02
CALD1-207ENST00000430085 MMP8P22894 467 aa15.19■□□□□ 0.02
CALD1-207ENST00000430085 NFX1Q12986 1120 aaKnown RBP15.19■□□□□ 0.02
CALD1-207ENST00000430085 CLUL1Q15846 466 aa15.19■□□□□ 0.02
CALD1-207ENST00000430085 ZBTB6Q15916 424 aa15.19■□□□□ 0.02
CALD1-207ENST00000430085 PTGISQ16647 500 aa15.19■□□□□ 0.02
CALD1-207ENST00000430085 MAP3K21Q5TCX8 1036 aa15.19■□□□□ 0.02
CALD1-207ENST00000430085 LRRC52Q8N7C0 313 aa15.19■□□□□ 0.02
CALD1-207ENST00000430085 C18orf25Q96B23 403 aaPredicted RBP15.19■□□□□ 0.02
CALD1-207ENST00000430085 NAP1L3Q99457 506 aaPredicted RBP15.19■□□□□ 0.02
CALD1-207ENST00000430085 LRRC1Q9BTT6 524 aa15.19■□□□□ 0.02
CALD1-207ENST00000430085 PARVAQ9NVD7 372 aa15.19■□□□□ 0.02
CALD1-207ENST00000430085 SMIM28A0A1B0GU29 152 aa15.19■□□□□ 0.02
CALD1-207ENST00000430085 CCDC66A2RUB6 948 aa15.19■□□□□ 0.02
CALD1-207ENST00000430085 THPOP40225 353 aa15.19■□□□□ 0.02
CALD1-207ENST00000430085 PTPN11Q06124 597 aaPredicted RBP15.19■□□□□ 0.02
CALD1-207ENST00000430085 ORC1Q13415 861 aa15.19■□□□□ 0.02
CALD1-207ENST00000430085 GLE1Q53GS7 698 aaKnown RBP15.19■□□□□ 0.02
CALD1-207ENST00000430085 CCSAPQ6IQ19 270 aaPredicted RBP15.19■□□□□ 0.02
CALD1-207ENST00000430085 RPAINQ86UA6 219 aa15.19■□□□□ 0.02
CALD1-207ENST00000430085 SLC4A11Q8NBS3 891 aa15.19■□□□□ 0.02
CALD1-207ENST00000430085 WNT8BQ93098 351 aa15.19■□□□□ 0.02
CALD1-207ENST00000430085 RNPC3Q96LT9 517 aaKnown RBP15.19■□□□□ 0.02
CALD1-207ENST00000430085 SENP6Q9GZR1 1112 aaPredicted RBP15.19■□□□□ 0.02
CALD1-207ENST00000430085 ELOVL4Q9GZR5 314 aa15.19■□□□□ 0.02
CALD1-207ENST00000430085 ZNF446Q9NWS9 450 aa15.19■□□□□ 0.02
CALD1-207ENST00000430085 HMGXB4Q9UGU5 601 aa15.19■□□□□ 0.02
CALD1-207ENST00000430085 TTC7AQ9ULT0 858 aaPredicted RBP15.19■□□□□ 0.02
CALD1-207ENST00000430085 BARX2Q9UMQ3 279 aaPredicted RBP15.19■□□□□ 0.02
CALD1-207ENST00000430085 ST3GAL5Q9UNP4 418 aa15.19■□□□□ 0.02
CALD1-207ENST00000430085 NOD1Q9Y239 953 aa15.19■□□□□ 0.02
CALD1-207ENST00000430085 KRIT1O00522 736 aa15.18■□□□□ 0.02
CALD1-207ENST00000430085 CABYRO75952 493 aa15.18■□□□□ 0.02
CALD1-207ENST00000430085 CHRNA1P02708 482 aa15.18■□□□□ 0.02
CALD1-207ENST00000430085 KCNE1P15382 129 aa15.18■□□□□ 0.02
CALD1-207ENST00000430085 CDH5P33151 784 aaPredicted RBP15.18■□□□□ 0.02
CALD1-207ENST00000430085 INCA1Q0VD86 236 aa15.18■□□□□ 0.02
CALD1-207ENST00000430085 PTP4A2Q12974 167 aa15.18■□□□□ 0.02
CALD1-207ENST00000430085 MAMLD1Q13495 774 aa15.18■□□□□ 0.02
CALD1-207ENST00000430085 DCAF12L1Q5VU92 463 aa15.18■□□□□ 0.02
CALD1-207ENST00000430085 C9orf57Q5W0N0 161 aa15.18■□□□□ 0.02
CALD1-207ENST00000430085 PLEKHA7Q6IQ23 1121 aa15.18■□□□□ 0.02
CALD1-207ENST00000430085 LLGL2Q6P1M3 1020 aa15.18■□□□□ 0.02
CALD1-207ENST00000430085 ERICH1Q86X53 443 aa15.18■□□□□ 0.02
CALD1-207ENST00000430085 HACE1Q8IYU2 909 aa15.18■□□□□ 0.02
CALD1-207ENST00000430085 SMG8Q8ND04 991 aaKnown RBP15.18■□□□□ 0.02
CALD1-207ENST00000430085 WHAMMQ8TF30 809 aa15.18■□□□□ 0.02
CALD1-207ENST00000430085 HNRNPLLQ8WVV9 542 aaKnown RBP15.18■□□□□ 0.02
CALD1-207ENST00000430085 RUBCNQ92622 972 aa15.18■□□□□ 0.02
CALD1-207ENST00000430085 ALG3Q92685 438 aa15.18■□□□□ 0.02
CALD1-207ENST00000430085 KRT35Q92764 455 aa15.18■□□□□ 0.02
CALD1-207ENST00000430085 HEXIM2Q96MH2 286 aaKnown RBP15.18■□□□□ 0.02
CALD1-207ENST00000430085 TWNKQ96RR1 684 aa15.18■□□□□ 0.02
CALD1-207ENST00000430085 KRT12Q99456 494 aa15.18■□□□□ 0.02
CALD1-207ENST00000430085 LHX5Q9H2C1 402 aa15.18■□□□□ 0.02
CALD1-207ENST00000430085 RNF39Q9H2S5 420 aa15.18■□□□□ 0.02
CALD1-207ENST00000430085 SNX9Q9Y5X1 595 aa15.18■□□□□ 0.02
CALD1-207ENST00000430085 TRIP11Q15643 1979 aa15.18■□□□□ 0.02
CALD1-207ENST00000430085 GPR182O15218 404 aa15.17■□□□□ 0.02
CALD1-207ENST00000430085 SEC31AO94979 1220 aaKnown RBP15.17■□□□□ 0.02
CALD1-207ENST00000430085 FGGP02679 453 aa15.17■□□□□ 0.02
CALD1-207ENST00000430085 VDRP11473 427 aa15.17■□□□□ 0.02
CALD1-207ENST00000430085 CTNNA1P35221 906 aaKnown RBP15.17■□□□□ 0.02
CALD1-207ENST00000430085 SLC1A1P43005 524 aa15.17■□□□□ 0.02
CALD1-207ENST00000430085 NDST1P52848 882 aa15.17■□□□□ 0.02
CALD1-207ENST00000430085 ITGA7Q13683 1181 aa15.17■□□□□ 0.02
CALD1-207ENST00000430085 LONRF2Q1L5Z9 754 aa15.17■□□□□ 0.02
CALD1-207ENST00000430085 XKR4Q5GH76 650 aa15.17■□□□□ 0.02
CALD1-207ENST00000430085 DENND1BQ6P3S1 775 aa15.17■□□□□ 0.02
CALD1-207ENST00000430085 ZNF560Q96MR9 790 aa15.17■□□□□ 0.02
CALD1-207ENST00000430085 NT5C1AQ9BXI3 368 aa15.17■□□□□ 0.02
CALD1-207ENST00000430085 AP1M1Q9BXS5 423 aa15.17■□□□□ 0.02
CALD1-207ENST00000430085 CHST12Q9NRB3 414 aa15.17■□□□□ 0.02
CALD1-207ENST00000430085 RNF19AQ9NV58 838 aa15.17■□□□□ 0.02
CALD1-207ENST00000430085 TMEM59LQ9UK28 342 aa15.17■□□□□ 0.02
CALD1-207ENST00000430085 GRIN2DO15399 1336 aa15.17■□□□□ 0.02
CALD1-207ENST00000430085 CCDC188H7C350 402 aa15.17■□□□□ 0.02
CALD1-207ENST00000430085 PPEF2O14830 753 aa15.17■□□□□ 0.02
CALD1-207ENST00000430085 CTNNA2P26232 953 aa15.17■□□□□ 0.02
CALD1-207ENST00000430085 ZNF211Q13398 564 aaPredicted RBP15.17■□□□□ 0.02
CALD1-207ENST00000430085 MTFR1Q15390 333 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms