RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 RTP3Q9BQQ7 232 aa18.3■□□□□ 0.52
UBE3D-204ENST00000430071 NUP62CLQ9H1M0 184 aa18.3■□□□□ 0.52
UBE3D-204ENST00000430071 MFSD1Q9H3U5 465 aa18.3■□□□□ 0.52
UBE3D-204ENST00000430071 RMND1Q9NWS8 449 aa18.3■□□□□ 0.52
UBE3D-204ENST00000430071 MAN1B1Q9UKM7 699 aa18.3■□□□□ 0.52
UBE3D-204ENST00000430071 DERAQ9Y315 318 aa18.3■□□□□ 0.52
UBE3D-204ENST00000430071 MRPS23Q9Y3D9 190 aaKnown RBP18.3■□□□□ 0.52
UBE3D-204ENST00000430071 ZFHX2Q9C0A1 2572 aaPredicted RBP18.29■□□□□ 0.52
UBE3D-204ENST00000430071 MOSPD3O75425 235 aa18.29■□□□□ 0.52
UBE3D-204ENST00000430071 SOAT2O75908 522 aa18.29■□□□□ 0.52
UBE3D-204ENST00000430071 SRFP11831 508 aa18.29■□□□□ 0.52
UBE3D-204ENST00000430071 GJA1P17302 382 aa18.29■□□□□ 0.52
UBE3D-204ENST00000430071 PTPN2P17706 415 aa18.29■□□□□ 0.52
UBE3D-204ENST00000430071 TWF1Q12792 350 aa18.29■□□□□ 0.52
UBE3D-204ENST00000430071 RIF1Q5UIP0 2472 aaKnown RBP18.29■□□□□ 0.52
UBE3D-204ENST00000430071 ISM2Q6H9L7 571 aa18.29■□□□□ 0.52
UBE3D-204ENST00000430071 OVOS1Q6IE37 1185 aa18.29■□□□□ 0.52
UBE3D-204ENST00000430071 SYCP3Q8IZU3 236 aa18.29■□□□□ 0.52
UBE3D-204ENST00000430071 ATAD1Q8NBU5 361 aa18.29■□□□□ 0.52
UBE3D-204ENST00000430071 OR10T2Q8NGX3 314 aa18.29■□□□□ 0.52
UBE3D-204ENST00000430071 NOC3LQ8WTT2 800 aaKnown RBP18.29■□□□□ 0.52
UBE3D-204ENST00000430071 TMEM206Q9H813 350 aa18.29■□□□□ 0.52
UBE3D-204ENST00000430071 KIAA1468Q9P260 1216 aa18.29■□□□□ 0.52
UBE3D-204ENST00000430071 EXOC7Q9UPT5 735 aa18.29■□□□□ 0.52
UBE3D-204ENST00000430071 MAPK8IP1Q9UQF2 711 aa18.29■□□□□ 0.52
UBE3D-204ENST00000430071 SLC27A5Q9Y2P5 690 aa18.29■□□□□ 0.52
UBE3D-204ENST00000430071 C2CD2Q9Y426 696 aa18.29■□□□□ 0.52
UBE3D-204ENST00000430071 PTPRDP23468 1912 aa18.28■□□□□ 0.52
UBE3D-204ENST00000430071 ANAPC1Q9H1A4 1944 aa18.28■□□□□ 0.52
UBE3D-204ENST00000430071 UBE4BO95155 1302 aa18.28■□□□□ 0.52
UBE3D-204ENST00000430071 NUP210Q8TEM1 1887 aaPredicted RBP18.28■□□□□ 0.52
UBE3D-204ENST00000430071 USP34Q70CQ2 3546 aa18.28■□□□□ 0.52
UBE3D-204ENST00000430071 COL4A2P08572 1712 aa18.28■□□□□ 0.52
UBE3D-204ENST00000430071 ATG2BQ96BY7 2078 aa18.28■□□□□ 0.52
UBE3D-204ENST00000430071 H0Y858 1186 aa18.28■□□□□ 0.52
UBE3D-204ENST00000430071 BIN1O00499 593 aa18.28■□□□□ 0.52
UBE3D-204ENST00000430071 TGFB1I1O43294 461 aa18.28■□□□□ 0.52
UBE3D-204ENST00000430071 TYMPP19971 482 aa18.28■□□□□ 0.52
UBE3D-204ENST00000430071 BMP6P22004 513 aa18.28■□□□□ 0.52
UBE3D-204ENST00000430071 DUSP4Q13115 394 aa18.28■□□□□ 0.52
UBE3D-204ENST00000430071 ZNF658Q5TYW1 1059 aaPredicted RBP18.28■□□□□ 0.52
UBE3D-204ENST00000430071 LMBRD2Q68DH5 695 aaPredicted RBP18.28■□□□□ 0.52
UBE3D-204ENST00000430071 RTL10Q7L3V2 364 aa18.28■□□□□ 0.52
UBE3D-204ENST00000430071 USP37Q86T82 979 aa18.28■□□□□ 0.52
UBE3D-204ENST00000430071 BRSK2Q8IWQ3 736 aa18.28■□□□□ 0.52
UBE3D-204ENST00000430071 NXPE3Q969Y0 559 aa18.28■□□□□ 0.52
UBE3D-204ENST00000430071 TSPAN18Q96SJ8 248 aa18.28■□□□□ 0.52
UBE3D-204ENST00000430071 DNAJC25Q9H1X3 360 aa18.28■□□□□ 0.52
UBE3D-204ENST00000430071 PDE11AQ9HCR9 933 aa18.28■□□□□ 0.52
UBE3D-204ENST00000430071 YIPF1Q9Y548 306 aa18.28■□□□□ 0.52
UBE3D-204ENST00000430071 WDR87Q6ZQQ6 2873 aa18.27■□□□□ 0.52
UBE3D-204ENST00000430071 FANCMQ8IYD8 2048 aa18.27■□□□□ 0.52
UBE3D-204ENST00000430071 MTMR11A4FU01 709 aa18.27■□□□□ 0.51
UBE3D-204ENST00000430071 GARTP22102 1010 aa18.27■□□□□ 0.51
UBE3D-204ENST00000430071 MORC3Q14149 939 aa18.27■□□□□ 0.51
UBE3D-204ENST00000430071 KNOP1Q1ED39 458 aaKnown RBP18.27■□□□□ 0.51
UBE3D-204ENST00000430071 WSCD1Q658N2 575 aa18.27■□□□□ 0.51
UBE3D-204ENST00000430071 C1orf127Q8N9H9 656 aa18.27■□□□□ 0.51
UBE3D-204ENST00000430071 CXorf38Q8TB03 319 aa18.27■□□□□ 0.51
UBE3D-204ENST00000430071 ZSWIM3Q96MP5 696 aa18.27■□□□□ 0.51
UBE3D-204ENST00000430071 AVENQ9NQS1 362 aaPredicted RBP18.27■□□□□ 0.51
UBE3D-204ENST00000430071 WNT16Q9UBV4 365 aa18.27■□□□□ 0.51
UBE3D-204ENST00000430071 ZFP37Q9Y6Q3 630 aaPredicted RBP18.27■□□□□ 0.51
UBE3D-204ENST00000430071 PTPRJQ12913 1337 aa18.27■□□□□ 0.51
UBE3D-204ENST00000430071 PTPRZ1P23471 2315 aaPredicted RBP18.26■□□□□ 0.51
UBE3D-204ENST00000430071 MYO15AQ9UKN7 3530 aa18.26■□□□□ 0.51
UBE3D-204ENST00000430071 CYB561D2O14569 222 aa18.26■□□□□ 0.51
UBE3D-204ENST00000430071 IL18RAPO95256 599 aa18.26■□□□□ 0.51
UBE3D-204ENST00000430071 CYP11A1P05108 521 aa18.26■□□□□ 0.51
UBE3D-204ENST00000430071 ODC1P11926 461 aa18.26■□□□□ 0.51
UBE3D-204ENST00000430071 CLCN5P51795 746 aa18.26■□□□□ 0.51
UBE3D-204ENST00000430071 TFAMQ00059 246 aaKnown RBP18.26■□□□□ 0.51
UBE3D-204ENST00000430071 GPR17Q13304 367 aa18.26■□□□□ 0.51
UBE3D-204ENST00000430071 TANGO2Q6ICL3 276 aa18.26■□□□□ 0.51
UBE3D-204ENST00000430071 CENPPQ6IPU0 288 aa18.26■□□□□ 0.51
UBE3D-204ENST00000430071 LRRTM3Q86VH5 581 aa18.26■□□□□ 0.51
UBE3D-204ENST00000430071 GUF1Q8N442 669 aaKnown RBP18.26■□□□□ 0.51
UBE3D-204ENST00000430071 LRRC3Q9BY71 257 aa18.26■□□□□ 0.51
UBE3D-204ENST00000430071 KCTD10Q9H3F6 313 aa18.26■□□□□ 0.51
UBE3D-204ENST00000430071 RBAKQ9NYW8 714 aaPredicted RBP18.26■□□□□ 0.51
UBE3D-204ENST00000430071 NCANO14594 1321 aa18.26■□□□□ 0.51
UBE3D-204ENST00000430071 PATJQ8NI35 1801 aa18.26■□□□□ 0.51
UBE3D-204ENST00000430071 MYH10P35580 1976 aa18.25■□□□□ 0.51
UBE3D-204ENST00000430071 FAM186AA6NE01 2351 aa18.25■□□□□ 0.51
UBE3D-204ENST00000430071 OR6C75A6NL08 312 aa18.25■□□□□ 0.51
UBE3D-204ENST00000430071 GALR2O43603 387 aaPredicted RBP18.25■□□□□ 0.51
UBE3D-204ENST00000430071 EXTL3O43909 919 aa18.25■□□□□ 0.51
UBE3D-204ENST00000430071 LRRN2O75325 713 aa18.25■□□□□ 0.51
UBE3D-204ENST00000430071 ITGB3P05106 788 aa18.25■□□□□ 0.51
UBE3D-204ENST00000430071 MYL4P12829 197 aa18.25■□□□□ 0.51
UBE3D-204ENST00000430071 AOC1P19801 751 aa18.25■□□□□ 0.51
UBE3D-204ENST00000430071 FCARP24071 287 aa18.25■□□□□ 0.51
UBE3D-204ENST00000430071 POLR2BP30876 1174 aaKnown RBP18.25■□□□□ 0.51
UBE3D-204ENST00000430071 PRCPP42785 496 aa18.25■□□□□ 0.51
UBE3D-204ENST00000430071 TAF6P49848 677 aa18.25■□□□□ 0.51
UBE3D-204ENST00000430071 MRE11P49959 708 aa18.25■□□□□ 0.51
UBE3D-204ENST00000430071 PTPN5P54829 565 aa18.25■□□□□ 0.51
UBE3D-204ENST00000430071 POU5F1Q01860 360 aaKnown RBP18.25■□□□□ 0.51
UBE3D-204ENST00000430071 ARMCX5Q6P1M9 558 aa18.25■□□□□ 0.51
UBE3D-204ENST00000430071 CBWD2Q8IUF1 395 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms