RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 PIAS1O75925 651 aa13.28□□□□□ -0.28
CPNE4-201ENST00000429747 FMO1Q01740 532 aa13.28□□□□□ -0.28
CPNE4-201ENST00000429747 TAP1Q03518 808 aa13.28□□□□□ -0.28
CPNE4-201ENST00000429747 RCN1Q15293 331 aa13.28□□□□□ -0.28
CPNE4-201ENST00000429747 C15orf52Q6ZUT6 534 aaKnown RBP13.28□□□□□ -0.28
CPNE4-201ENST00000429747 PCDHB18PQ96TA0 734 aa13.28□□□□□ -0.28
CPNE4-201ENST00000429747 MED10Q9BTT4 135 aa13.28□□□□□ -0.28
CPNE4-201ENST00000429747 FAM198AQ9UFP1 575 aa13.28□□□□□ -0.28
CPNE4-201ENST00000429747 BCAP29Q9UHQ4 241 aa13.28□□□□□ -0.28
CPNE4-201ENST00000429747 VAV3Q9UKW4 847 aa13.28□□□□□ -0.28
CPNE4-201ENST00000429747 CSADQ9Y600 493 aa13.28□□□□□ -0.28
CPNE4-201ENST00000429747 BCL9LQ86UU0 1499 aa13.27□□□□□ -0.28
CPNE4-201ENST00000429747 CYP3A4P08684 503 aa13.27□□□□□ -0.28
CPNE4-201ENST00000429747 VIL1P09327 827 aaKnown RBP13.27□□□□□ -0.28
CPNE4-201ENST00000429747 SDC4P31431 198 aa13.27□□□□□ -0.28
CPNE4-201ENST00000429747 LLGL2Q6P1M3 1020 aa13.27□□□□□ -0.28
CPNE4-201ENST00000429747 KCNV1Q6PIU1 500 aa13.27□□□□□ -0.28
CPNE4-201ENST00000429747 ARID3BQ8IVW6 561 aaPredicted RBP13.27□□□□□ -0.28
CPNE4-201ENST00000429747 PPIL6Q8IXY8 311 aa13.27□□□□□ -0.28
CPNE4-201ENST00000429747 FBXO36Q8NEA4 188 aa13.27□□□□□ -0.28
CPNE4-201ENST00000429747 EXD1Q8NHP7 514 aa13.27□□□□□ -0.28
CPNE4-201ENST00000429747 AGR3Q8TD06 166 aa13.27□□□□□ -0.28
CPNE4-201ENST00000429747 TMC2Q8TDI7 906 aa13.27□□□□□ -0.28
CPNE4-201ENST00000429747 ATG4CQ96DT6 458 aa13.27□□□□□ -0.28
CPNE4-201ENST00000429747 NAF1Q96HR8 494 aaKnown RBP13.27□□□□□ -0.28
CPNE4-201ENST00000429747 WWP1Q9H0M0 922 aa13.27□□□□□ -0.28
CPNE4-201ENST00000429747 Q9H521 79 aa13.27□□□□□ -0.28
CPNE4-201ENST00000429747 DNPEPQ9ULA0 475 aa13.27□□□□□ -0.28
CPNE4-201ENST00000429747 OTUD4Q01804 1114 aaKnown RBP13.27□□□□□ -0.29
CPNE4-201ENST00000429747 ORC1Q13415 861 aa13.27□□□□□ -0.29
CPNE4-201ENST00000429747 TTC27Q6P3X3 843 aa13.27□□□□□ -0.29
CPNE4-201ENST00000429747 MFSD7Q6UXD7 560 aa13.27□□□□□ -0.29
CPNE4-201ENST00000429747 PIP4K2CQ8TBX8 421 aa13.27□□□□□ -0.29
CPNE4-201ENST00000429747 CCT6BQ92526 530 aa13.27□□□□□ -0.29
CPNE4-201ENST00000429747 ART4Q93070 314 aa13.27□□□□□ -0.29
CPNE4-201ENST00000429747 PCMTD2Q9NV79 361 aa13.27□□□□□ -0.29
CPNE4-201ENST00000429747 FBXO40Q9UH90 709 aa13.27□□□□□ -0.29
CPNE4-201ENST00000429747 PDGFRAP16234 1089 aa13.27□□□□□ -0.29
CPNE4-201ENST00000429747 SSTR1P30872 391 aa13.27□□□□□ -0.29
CPNE4-201ENST00000429747 RGS7P49802 495 aa13.27□□□□□ -0.29
CPNE4-201ENST00000429747 AP2B1P63010 937 aa13.27□□□□□ -0.29
CPNE4-201ENST00000429747 COG7P83436 770 aa13.27□□□□□ -0.29
CPNE4-201ENST00000429747 DDR1Q08345 913 aa13.27□□□□□ -0.29
CPNE4-201ENST00000429747 EAPPQ56P03 285 aaPredicted RBP13.27□□□□□ -0.29
CPNE4-201ENST00000429747 FAM71AQ8IYT1 594 aa13.27□□□□□ -0.29
CPNE4-201ENST00000429747 ACTL9Q8TC94 416 aa13.27□□□□□ -0.29
CPNE4-201ENST00000429747 NSL1Q96IY1 281 aa13.27□□□□□ -0.29
CPNE4-201ENST00000429747 MYLK2Q9H1R3 596 aa13.27□□□□□ -0.29
CPNE4-201ENST00000429747 AGO4Q9HCK5 861 aaKnown RBP13.27□□□□□ -0.29
CPNE4-201ENST00000429747 VCX3AQ9NNX9 186 aa13.27□□□□□ -0.29
CPNE4-201ENST00000429747 TRIM49D1C9J1S8 452 aa13.26□□□□□ -0.29
CPNE4-201ENST00000429747 HSPA4LO95757 839 aa13.26□□□□□ -0.29
CPNE4-201ENST00000429747 EPHB2P29323 1055 aa13.26□□□□□ -0.29
CPNE4-201ENST00000429747 CLK2P49760 499 aaKnown RBP13.26□□□□□ -0.29
CPNE4-201ENST00000429747 JAM2P57087 298 aa13.26□□□□□ -0.29
CPNE4-201ENST00000429747 RTKN2Q8IZC4 609 aa13.26□□□□□ -0.29
CPNE4-201ENST00000429747 OR6B3Q8NGW1 331 aa13.26□□□□□ -0.29
CPNE4-201ENST00000429747 ATXN7L3BQ96GX2 97 aa13.26□□□□□ -0.29
CPNE4-201ENST00000429747 PAFAH2Q99487 392 aa13.26□□□□□ -0.29
CPNE4-201ENST00000429747 DHX35Q9H5Z1 703 aaKnown RBP13.26□□□□□ -0.29
CPNE4-201ENST00000429747 SIX2Q9NPC8 291 aa13.26□□□□□ -0.29
CPNE4-201ENST00000429747 PIK3CDO00329 1044 aa13.26□□□□□ -0.29
CPNE4-201ENST00000429747 HNRNPCL1O60812 293 aaKnown RBP13.26□□□□□ -0.29
CPNE4-201ENST00000429747 GH1P01241 217 aa13.26□□□□□ -0.29
CPNE4-201ENST00000429747 THOC5Q13769 683 aaKnown RBP13.26□□□□□ -0.29
CPNE4-201ENST00000429747 ATP13A4Q4VNC1 1196 aa13.26□□□□□ -0.29
CPNE4-201ENST00000429747 SULF1Q8IWU6 871 aa13.26□□□□□ -0.29
CPNE4-201ENST00000429747 ST13P4Q8IZP2 240 aaPredicted RBP13.26□□□□□ -0.29
CPNE4-201ENST00000429747 GSDMBQ8TAX9 411 aa13.26□□□□□ -0.29
CPNE4-201ENST00000429747 ACAD9Q9H845 621 aa13.26□□□□□ -0.29
CPNE4-201ENST00000429747 C10orf88Q9H8K7 445 aa13.26□□□□□ -0.29
CPNE4-201ENST00000429747 SLCO1B3Q9NPD5 702 aa13.26□□□□□ -0.29
CPNE4-201ENST00000429747 DONSONQ9NYP3 566 aa13.26□□□□□ -0.29
CPNE4-201ENST00000429747 IVNS1ABPQ9Y6Y0 642 aa13.26□□□□□ -0.29
CPNE4-201ENST00000429747 DUOX1Q9NRD9 1551 aa13.26□□□□□ -0.29
CPNE4-201ENST00000429747 SESN2P58004 480 aaPredicted RBP13.26□□□□□ -0.29
CPNE4-201ENST00000429747 IFRD2Q12894 506 aaPredicted RBP13.26□□□□□ -0.29
CPNE4-201ENST00000429747 PTK6Q13882 451 aa13.26□□□□□ -0.29
CPNE4-201ENST00000429747 TFDP3Q5H9I0 405 aa13.26□□□□□ -0.29
CPNE4-201ENST00000429747 RABGAP1LQ5R372 815 aa13.26□□□□□ -0.29
CPNE4-201ENST00000429747 SLFN11Q7Z7L1 901 aa13.26□□□□□ -0.29
CPNE4-201ENST00000429747 C4orf19Q8IY42 314 aa13.26□□□□□ -0.29
CPNE4-201ENST00000429747 SYTL5Q8TDW5 730 aaPredicted RBP13.26□□□□□ -0.29
CPNE4-201ENST00000429747 NLRP7Q8WX94 980 aa13.26□□□□□ -0.29
CPNE4-201ENST00000429747 LPAR1Q92633 364 aa13.26□□□□□ -0.29
CPNE4-201ENST00000429747 METTL5Q9NRN9 209 aaKnown RBP13.26□□□□□ -0.29
CPNE4-201ENST00000429747 ATXN2Q99700 1313 aaKnown RBP13.26□□□□□ -0.29
CPNE4-201ENST00000429747 ETS1P14921 441 aa13.25□□□□□ -0.29
CPNE4-201ENST00000429747 KCNA3P22001 575 aa13.25□□□□□ -0.29
CPNE4-201ENST00000429747 STAT5BP51692 787 aa13.25□□□□□ -0.29
CPNE4-201ENST00000429747 XRCC4Q13426 336 aa13.25□□□□□ -0.29
CPNE4-201ENST00000429747 KCTD2Q14681 263 aa13.25□□□□□ -0.29
CPNE4-201ENST00000429747 MMEL1Q495T6 779 aa13.25□□□□□ -0.29
CPNE4-201ENST00000429747 ACCSLQ4AC99 568 aa13.25□□□□□ -0.29
CPNE4-201ENST00000429747 SH2D4BQ5SQS7 431 aa13.25□□□□□ -0.29
CPNE4-201ENST00000429747 SPOCD1Q6ZMY3 1216 aa13.25□□□□□ -0.29
CPNE4-201ENST00000429747 EMC1Q8N766 993 aa13.25□□□□□ -0.29
CPNE4-201ENST00000429747 SHC3Q92529 594 aa13.25□□□□□ -0.29
CPNE4-201ENST00000429747 DDX27Q96GQ7 796 aaKnown RBP13.25□□□□□ -0.29
CPNE4-201ENST00000429747 MTO1Q9Y2Z2 717 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms