RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 ZNF445P59923 1031 aa16.02■□□□□ 0.16
GARNL3-204ENST00000429629 MYL7Q01449 175 aa16.02■□□□□ 0.16
GARNL3-204ENST00000429629 VWA3BQ502W6 1294 aa16.02■□□□□ 0.16
GARNL3-204ENST00000429629 LRSAM1Q6UWE0 723 aa16.02■□□□□ 0.16
GARNL3-204ENST00000429629 RSPO2Q6UXX9 243 aaPredicted RBP16.02■□□□□ 0.16
GARNL3-204ENST00000429629 CYP26C1Q6V0L0 522 aa16.02■□□□□ 0.16
GARNL3-204ENST00000429629 DHX40Q8IX18 779 aaKnown RBP16.02■□□□□ 0.16
GARNL3-204ENST00000429629 ADGRF2Q8IZF7 708 aa16.02■□□□□ 0.16
GARNL3-204ENST00000429629 EHBP1Q8NDI1 1231 aa16.02■□□□□ 0.16
GARNL3-204ENST00000429629 MAFAQ8NHW3 353 aaPredicted RBP16.02■□□□□ 0.16
GARNL3-204ENST00000429629 LMO3Q8TAP4 145 aa16.02■□□□□ 0.16
GARNL3-204ENST00000429629 C2orf15Q8WU43 125 aaKnown RBP16.02■□□□□ 0.16
GARNL3-204ENST00000429629 SEMA4DQ92854 862 aa16.02■□□□□ 0.16
GARNL3-204ENST00000429629 JAKMIP2Q96AA8 810 aa16.02■□□□□ 0.16
GARNL3-204ENST00000429629 MMS19Q96T76 1030 aa16.02■□□□□ 0.16
GARNL3-204ENST00000429629 ANP32EQ9BTT0 268 aa16.02■□□□□ 0.16
GARNL3-204ENST00000429629 HSD3B7Q9H2F3 369 aa16.02■□□□□ 0.16
GARNL3-204ENST00000429629 NDST4Q9H3R1 872 aa16.02■□□□□ 0.16
GARNL3-204ENST00000429629 DZANK1Q9NVP4 752 aa16.02■□□□□ 0.16
GARNL3-204ENST00000429629 TIMM13Q9Y5L4 95 aaPredicted RBP16.02■□□□□ 0.16
GARNL3-204ENST00000429629 TDRD15B5MCY1 1934 aaKnown RBP16.02■□□□□ 0.15
GARNL3-204ENST00000429629 BECN2A8MW95 431 aa16.01■□□□□ 0.15
GARNL3-204ENST00000429629 PER2O15055 1255 aa16.01■□□□□ 0.15
GARNL3-204ENST00000429629 GLUD1P00367 558 aa16.01■□□□□ 0.15
GARNL3-204ENST00000429629 TPM2P07951 284 aa16.01■□□□□ 0.15
GARNL3-204ENST00000429629 ATF2P15336 505 aa16.01■□□□□ 0.15
GARNL3-204ENST00000429629 GNL1P36915 607 aaPredicted RBP16.01■□□□□ 0.15
GARNL3-204ENST00000429629 NOP14P78316 857 aaKnown RBP16.01■□□□□ 0.15
GARNL3-204ENST00000429629 MIIPQ5JXC2 388 aa16.01■□□□□ 0.15
GARNL3-204ENST00000429629 RBM23Q86U06 439 aaKnown RBP16.01■□□□□ 0.15
GARNL3-204ENST00000429629 UNC93AQ86WB7 457 aa16.01■□□□□ 0.15
GARNL3-204ENST00000429629 DCP1BQ8IZD4 617 aaKnown RBP16.01■□□□□ 0.15
GARNL3-204ENST00000429629 KBTBD7Q8WVZ9 684 aa16.01■□□□□ 0.15
GARNL3-204ENST00000429629 RTP3Q9BQQ7 232 aa16.01■□□□□ 0.15
GARNL3-204ENST00000429629 NIF3L1Q9GZT8 377 aa16.01■□□□□ 0.15
GARNL3-204ENST00000429629 ZCWPW1Q9H0M4 648 aa16.01■□□□□ 0.15
GARNL3-204ENST00000429629 APOBEC3GQ9HC16 384 aaKnown RBP16.01■□□□□ 0.15
GARNL3-204ENST00000429629 NXF1Q9UBU9 619 aaKnown RBP16.01■□□□□ 0.15
GARNL3-204ENST00000429629 AFF4Q9UHB7 1163 aaKnown RBP16.01■□□□□ 0.15
GARNL3-204ENST00000429629 HCFC2Q9Y5Z7 792 aa16.01■□□□□ 0.15
GARNL3-204ENST00000429629 CDY1Q9Y6F8 540 aa16.01■□□□□ 0.15
GARNL3-204ENST00000429629 TGM5O43548 720 aa16■□□□□ 0.15
GARNL3-204ENST00000429629 POU2F2P09086 479 aa16■□□□□ 0.15
GARNL3-204ENST00000429629 CDK11BP21127 795 aaKnown RBP16■□□□□ 0.15
GARNL3-204ENST00000429629 TBXAS1P24557 533 aaPredicted RBP16■□□□□ 0.15
GARNL3-204ENST00000429629 HOXA9P31269 272 aa16■□□□□ 0.15
GARNL3-204ENST00000429629 ASPAP45381 313 aa16■□□□□ 0.15
GARNL3-204ENST00000429629 INCA1Q0VD86 236 aa16■□□□□ 0.15
GARNL3-204ENST00000429629 MAPRE1Q15691 268 aaKnown RBP16■□□□□ 0.15
GARNL3-204ENST00000429629 NFE2Q16621 373 aaPredicted RBP16■□□□□ 0.15
GARNL3-204ENST00000429629 GBP6Q6ZN66 633 aa16■□□□□ 0.15
GARNL3-204ENST00000429629 CREBRFQ8IUR6 639 aa16■□□□□ 0.15
GARNL3-204ENST00000429629 MICALL1Q8N3F8 863 aa16■□□□□ 0.15
GARNL3-204ENST00000429629 AOPEPQ8N6M6 819 aa16■□□□□ 0.15
GARNL3-204ENST00000429629 CMASQ8NFW8 434 aaPredicted RBP16■□□□□ 0.15
GARNL3-204ENST00000429629 FAM200AQ8TCP9 573 aa16■□□□□ 0.15
GARNL3-204ENST00000429629 HLA-CQ95604 372 aa16■□□□□ 0.15
GARNL3-204ENST00000429629 DNAI2Q9GZS0 605 aa16■□□□□ 0.15
GARNL3-204ENST00000429629 MMRN2Q9H8L6 949 aa16■□□□□ 0.15
GARNL3-204ENST00000429629 DDX43Q9NXZ2 648 aaKnown RBP16■□□□□ 0.15
GARNL3-204ENST00000429629 CDH9Q9ULB4 789 aa16■□□□□ 0.15
GARNL3-204ENST00000429629 ADAM12O43184 909 aa15.99■□□□□ 0.15
GARNL3-204ENST00000429629 CA8P35219 290 aa15.99■□□□□ 0.15
GARNL3-204ENST00000429629 LTBRP36941 435 aa15.99■□□□□ 0.15
GARNL3-204ENST00000429629 TPM4P67936 248 aa15.99■□□□□ 0.15
GARNL3-204ENST00000429629 TSPY1Q01534 308 aa15.99■□□□□ 0.15
GARNL3-204ENST00000429629 ROR1Q01973 937 aa15.99■□□□□ 0.15
GARNL3-204ENST00000429629 GCNT1Q02742 428 aa15.99■□□□□ 0.15
GARNL3-204ENST00000429629 KRT31Q15323 416 aa15.99■□□□□ 0.15
GARNL3-204ENST00000429629 EXOC3L4Q17RC7 722 aa15.99■□□□□ 0.15
GARNL3-204ENST00000429629 FAM171BQ6P995 826 aa15.99■□□□□ 0.15
GARNL3-204ENST00000429629 CCDC149Q6ZUS6 474 aa15.99■□□□□ 0.15
GARNL3-204ENST00000429629 ENOSF1Q7L5Y1 443 aa15.99■□□□□ 0.15
GARNL3-204ENST00000429629 TCEAL8Q8IYN2 117 aa15.99■□□□□ 0.15
GARNL3-204ENST00000429629 CRYBG2Q8N1P7 616 aa15.99■□□□□ 0.15
GARNL3-204ENST00000429629 KREMEN2Q8NCW0 462 aa15.99■□□□□ 0.15
GARNL3-204ENST00000429629 NT5C1BQ96P26 610 aa15.99■□□□□ 0.15
GARNL3-204ENST00000429629 SNX25Q9H3E2 840 aa15.99■□□□□ 0.15
GARNL3-204ENST00000429629 IGFLR1Q9H665 355 aa15.99■□□□□ 0.15
GARNL3-204ENST00000429629 CBX8Q9HC52 389 aa15.99■□□□□ 0.15
GARNL3-204ENST00000429629 ZDHHC7Q9NXF8 308 aa15.99■□□□□ 0.15
GARNL3-204ENST00000429629 FBXW11Q9UKB1 542 aa15.99■□□□□ 0.15
GARNL3-204ENST00000429629 BARX2Q9UMQ3 279 aaPredicted RBP15.99■□□□□ 0.15
GARNL3-204ENST00000429629 NLRC5Q86WI3 1866 aa15.99■□□□□ 0.15
GARNL3-204ENST00000429629 KIAA1671Q9BY89 1806 aa15.98■□□□□ 0.15
GARNL3-204ENST00000429629 WDR27A2RRH5 827 aa15.98■□□□□ 0.15
GARNL3-204ENST00000429629 GLP2RO95838 553 aa15.98■□□□□ 0.15
GARNL3-204ENST00000429629 HNRNPA1P09651 372 aaKnown RBP eCLIP15.98■□□□□ 0.15
GARNL3-204ENST00000429629 RPL17P18621 184 aaKnown RBP15.98■□□□□ 0.15
GARNL3-204ENST00000429629 YWHAEP62258 255 aaKnown RBP15.98■□□□□ 0.15
GARNL3-204ENST00000429629 PDCD11Q14690 1871 aaKnown RBP15.98■□□□□ 0.15
GARNL3-204ENST00000429629 CCDC85BQ15834 202 aaPredicted RBP15.98■□□□□ 0.15
GARNL3-204ENST00000429629 ANKRD54Q6NXT1 300 aa15.98■□□□□ 0.15
GARNL3-204ENST00000429629 OSTM1Q86WC4 334 aa15.98■□□□□ 0.15
GARNL3-204ENST00000429629 VN1R2Q8NFZ6 395 aa15.98■□□□□ 0.15
GARNL3-204ENST00000429629 OR10T2Q8NGX3 314 aa15.98■□□□□ 0.15
GARNL3-204ENST00000429629 FUBP3Q96I24 572 aaKnown RBP eCLIP15.98■□□□□ 0.15
GARNL3-204ENST00000429629 MSLNLQ96KJ4 702 aa15.98■□□□□ 0.15
GARNL3-204ENST00000429629 TNIP3Q96KP6 325 aa15.98■□□□□ 0.15
GARNL3-204ENST00000429629 PKMYT1Q99640 499 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms