RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 NT5C1B-RDH14C9J2C7 533 aa18.23■□□□□ 0.51
LINC00887-203ENST00000429578 GFPT2O94808 682 aa18.23■□□□□ 0.51
LINC00887-203ENST00000429578 CCDC172P0C7W6 258 aa18.23■□□□□ 0.51
LINC00887-203ENST00000429578 KRT5P13647 590 aa18.23■□□□□ 0.51
LINC00887-203ENST00000429578 FERP16591 822 aa18.23■□□□□ 0.51
LINC00887-203ENST00000429578 PBX3P40426 434 aa18.23■□□□□ 0.51
LINC00887-203ENST00000429578 USP8P40818 1118 aa18.23■□□□□ 0.51
LINC00887-203ENST00000429578 WDR59Q6PJI9 974 aa18.23■□□□□ 0.51
LINC00887-203ENST00000429578 IRF2BP2Q7Z5L9 587 aa18.23■□□□□ 0.51
LINC00887-203ENST00000429578 LRRC8AQ8IWT6 810 aa18.23■□□□□ 0.51
LINC00887-203ENST00000429578 PDCL2Q8N4E4 241 aa18.23■□□□□ 0.51
LINC00887-203ENST00000429578 ZNF558Q96NG5 402 aa18.23■□□□□ 0.51
LINC00887-203ENST00000429578 MRPL45Q9BRJ2 306 aaKnown RBP18.23■□□□□ 0.51
LINC00887-203ENST00000429578 ZNHIT6Q9NWK9 470 aaKnown RBP18.23■□□□□ 0.51
LINC00887-203ENST00000429578 BARX2Q9UMQ3 279 aaPredicted RBP18.23■□□□□ 0.51
LINC00887-203ENST00000429578 GRXCR1A8MXD5 290 aa18.22■□□□□ 0.51
LINC00887-203ENST00000429578 I3L4J1 428 aa18.22■□□□□ 0.51
LINC00887-203ENST00000429578 CILPO75339 1184 aa18.22■□□□□ 0.51
LINC00887-203ENST00000429578 ODC1P11926 461 aa18.22■□□□□ 0.51
LINC00887-203ENST00000429578 ARID5AQ03989 594 aa18.22■□□□□ 0.51
LINC00887-203ENST00000429578 ASIC2Q16515 512 aa18.22■□□□□ 0.51
LINC00887-203ENST00000429578 MEA1Q16626 185 aa18.22■□□□□ 0.51
LINC00887-203ENST00000429578 TMEM173Q86WV6 379 aaPredicted RBP18.22■□□□□ 0.51
LINC00887-203ENST00000429578 ADGRF2Q8IZF7 708 aa18.22■□□□□ 0.51
LINC00887-203ENST00000429578 TMEM86AQ8N2M4 240 aa18.22■□□□□ 0.51
LINC00887-203ENST00000429578 KBTBD7Q8WVZ9 684 aa18.22■□□□□ 0.51
LINC00887-203ENST00000429578 MYLIPQ8WY64 445 aa18.22■□□□□ 0.51
LINC00887-203ENST00000429578 TIFAQ96CG3 184 aa18.22■□□□□ 0.51
LINC00887-203ENST00000429578 SF3B1O75533 1304 aaKnown RBP eCLIP18.21■□□□□ 0.51
LINC00887-203ENST00000429578 CYP26A1O43174 497 aa18.21■□□□□ 0.51
LINC00887-203ENST00000429578 CYP11A1P05108 521 aa18.21■□□□□ 0.51
LINC00887-203ENST00000429578 FECHP22830 423 aa18.21■□□□□ 0.51
LINC00887-203ENST00000429578 CLCN1P35523 988 aa18.21■□□□□ 0.51
LINC00887-203ENST00000429578 PRKCIP41743 596 aa18.21■□□□□ 0.51
LINC00887-203ENST00000429578 ZNF132P52740 706 aa18.21■□□□□ 0.51
LINC00887-203ENST00000429578 CDK17Q00537 523 aa18.21■□□□□ 0.51
LINC00887-203ENST00000429578 WSCD1Q658N2 575 aa18.21■□□□□ 0.51
LINC00887-203ENST00000429578 COLGALT1Q8NBJ5 622 aa18.21■□□□□ 0.51
LINC00887-203ENST00000429578 RBBP8NLQ8NC74 664 aaPredicted RBP18.21■□□□□ 0.51
LINC00887-203ENST00000429578 SPATA18Q8TC71 538 aa18.21■□□□□ 0.51
LINC00887-203ENST00000429578 CLP1Q92989 425 aaKnown RBP18.21■□□□□ 0.51
LINC00887-203ENST00000429578 IGSF21Q96ID5 467 aa18.21■□□□□ 0.51
LINC00887-203ENST00000429578 PBX4Q9BYU1 374 aa18.21■□□□□ 0.51
LINC00887-203ENST00000429578 AAASQ9NRG9 546 aa18.21■□□□□ 0.51
LINC00887-203ENST00000429578 DSEQ9UL01 958 aa18.21■□□□□ 0.51
LINC00887-203ENST00000429578 CDH23Q9H251 3354 aa18.21■□□□□ 0.51
LINC00887-203ENST00000429578 GABRDO14764 452 aa18.2■□□□□ 0.5
LINC00887-203ENST00000429578 LINC00271P0C7V0 271 aa18.2■□□□□ 0.5
LINC00887-203ENST00000429578 WARSP23381 471 aaKnown RBP18.2■□□□□ 0.5
LINC00887-203ENST00000429578 PBX2P40425 430 aa18.2■□□□□ 0.5
LINC00887-203ENST00000429578 NDST1P52848 882 aa18.2■□□□□ 0.5
LINC00887-203ENST00000429578 ELAVL2Q12926 359 aaKnown RBP18.2■□□□□ 0.5
LINC00887-203ENST00000429578 HGSNATQ68CP4 663 aa18.2■□□□□ 0.5
LINC00887-203ENST00000429578 FUT10Q6P4F1 479 aa18.2■□□□□ 0.5
LINC00887-203ENST00000429578 UNC93AQ86WB7 457 aa18.2■□□□□ 0.5
LINC00887-203ENST00000429578 SLC39A11Q8N1S5 342 aa18.2■□□□□ 0.5
LINC00887-203ENST00000429578 OR6B3Q8NGW1 331 aa18.2■□□□□ 0.5
LINC00887-203ENST00000429578 WHAMMQ8TF30 809 aa18.2■□□□□ 0.5
LINC00887-203ENST00000429578 BAG1Q99933 345 aaPredicted RBP18.2■□□□□ 0.5
LINC00887-203ENST00000429578 PCDHB8Q9UN66 801 aa18.2■□□□□ 0.5
LINC00887-203ENST00000429578 BZW2Q9Y6E2 419 aaKnown RBP18.2■□□□□ 0.5
LINC00887-203ENST00000429578 SYN3O14994 580 aa18.2■□□□□ 0.5
LINC00887-203ENST00000429578 SERPING1P05155 500 aa18.2■□□□□ 0.5
LINC00887-203ENST00000429578 TYMPP19971 482 aa18.2■□□□□ 0.5
LINC00887-203ENST00000429578 GNL1P36915 607 aaPredicted RBP18.2■□□□□ 0.5
LINC00887-203ENST00000429578 LHX1P48742 406 aa18.2■□□□□ 0.5
LINC00887-203ENST00000429578 RAD23BP54727 409 aa18.2■□□□□ 0.5
LINC00887-203ENST00000429578 BPIFB4P59827 614 aa18.2■□□□□ 0.5
LINC00887-203ENST00000429578 PTK2Q05397 1052 aa18.2■□□□□ 0.5
LINC00887-203ENST00000429578 KLHL30Q0D2K2 578 aa18.2■□□□□ 0.5
LINC00887-203ENST00000429578 ZNF394Q53GI3 561 aa18.2■□□□□ 0.5
LINC00887-203ENST00000429578 GPIHBP1Q8IV16 184 aa18.2■□□□□ 0.5
LINC00887-203ENST00000429578 CCDC112Q8NEF3 446 aa18.2■□□□□ 0.5
LINC00887-203ENST00000429578 BCL7CQ8WUZ0 217 aaPredicted RBP18.2■□□□□ 0.5
LINC00887-203ENST00000429578 NT5C1AQ9BXI3 368 aa18.2■□□□□ 0.5
LINC00887-203ENST00000429578 GPR62Q9BZJ7 368 aa18.2■□□□□ 0.5
LINC00887-203ENST00000429578 SNX25Q9H3E2 840 aa18.2■□□□□ 0.5
LINC00887-203ENST00000429578 ZNF576Q9H609 170 aa18.2■□□□□ 0.5
LINC00887-203ENST00000429578 HMGXB4Q9UGU5 601 aa18.2■□□□□ 0.5
LINC00887-203ENST00000429578 PCDHB12Q9Y5F1 795 aa18.2■□□□□ 0.5
LINC00887-203ENST00000429578 TIMM13Q9Y5L4 95 aaPredicted RBP18.2■□□□□ 0.5
LINC00887-203ENST00000429578 PTPRDP23468 1912 aa18.19■□□□□ 0.5
LINC00887-203ENST00000429578 LCHNA4D1U4 455 aa18.19■□□□□ 0.5
LINC00887-203ENST00000429578 EFEMP2O95967 443 aa18.19■□□□□ 0.5
LINC00887-203ENST00000429578 SKILP12757 684 aa18.19■□□□□ 0.5
LINC00887-203ENST00000429578 PPM1AP35813 382 aa18.19■□□□□ 0.5
LINC00887-203ENST00000429578 RABGGTBP53611 331 aa18.19■□□□□ 0.5
LINC00887-203ENST00000429578 SLC47A2Q86VL8 602 aa18.19■□□□□ 0.5
LINC00887-203ENST00000429578 METTL23Q86XA0 190 aa18.19■□□□□ 0.5
LINC00887-203ENST00000429578 TMEM139Q8IV31 216 aa18.19■□□□□ 0.5
LINC00887-203ENST00000429578 TMEM169Q96HH4 297 aa18.19■□□□□ 0.5
LINC00887-203ENST00000429578 TWNKQ96RR1 684 aa18.19■□□□□ 0.5
LINC00887-203ENST00000429578 CHP1Q99653 195 aa18.19■□□□□ 0.5
LINC00887-203ENST00000429578 SPG21Q9NZD8 308 aa18.19■□□□□ 0.5
LINC00887-203ENST00000429578 ARHGAP20Q9P2F6 1191 aa18.19■□□□□ 0.5
LINC00887-203ENST00000429578 NME7Q9Y5B8 376 aa18.19■□□□□ 0.5
LINC00887-203ENST00000429578 A8MXQ7 604 aa18.18■□□□□ 0.5
LINC00887-203ENST00000429578 PAEPP09466 180 aa18.18■□□□□ 0.5
LINC00887-203ENST00000429578 FOSL2P15408 326 aa18.18■□□□□ 0.5
LINC00887-203ENST00000429578 CYP11B1P15538 503 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms