RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 STAT4Q14765 748 aa13.16□□□□□ -0.3
CDH3-202ENST00000429102 TAF5Q15542 800 aa13.16□□□□□ -0.3
CDH3-202ENST00000429102 CYP1B1Q16678 543 aa13.16□□□□□ -0.3
CDH3-202ENST00000429102 SCYL2Q6P3W7 929 aa13.16□□□□□ -0.3
CDH3-202ENST00000429102 RHBDF2Q6PJF5 856 aa13.16□□□□□ -0.3
CDH3-202ENST00000429102 GBP7Q8N8V2 638 aaPredicted RBP13.16□□□□□ -0.3
CDH3-202ENST00000429102 ARHGEF3Q9NR81 526 aa13.16□□□□□ -0.3
CDH3-202ENST00000429102 MYPNQ86TC9 1320 aa13.16□□□□□ -0.3
CDH3-202ENST00000429102 K7ERI5 159 aa13.15□□□□□ -0.3
CDH3-202ENST00000429102 SMIM24O75264 130 aa13.15□□□□□ -0.3
CDH3-202ENST00000429102 POLE2P56282 527 aa13.15□□□□□ -0.3
CDH3-202ENST00000429102 MSS51Q4VC12 460 aa13.15□□□□□ -0.3
CDH3-202ENST00000429102 DSTYKQ6XUX3 929 aa13.15□□□□□ -0.3
CDH3-202ENST00000429102 DEPTORQ8TB45 409 aa13.15□□□□□ -0.3
CDH3-202ENST00000429102 FAXDC2Q96IV6 333 aa13.15□□□□□ -0.3
CDH3-202ENST00000429102 MECRQ9BV79 373 aa13.15□□□□□ -0.3
CDH3-202ENST00000429102 DENND2DQ9H6A0 471 aaPredicted RBP13.15□□□□□ -0.3
CDH3-202ENST00000429102 RNF19AQ9NV58 838 aa13.15□□□□□ -0.3
CDH3-202ENST00000429102 RFX1P22670 979 aa13.15□□□□□ -0.3
CDH3-202ENST00000429102 TNFSF9P41273 254 aa13.15□□□□□ -0.3
CDH3-202ENST00000429102 ABL2P42684 1182 aa13.15□□□□□ -0.3
CDH3-202ENST00000429102 CTCFP49711 727 aaPredicted RBP13.15□□□□□ -0.3
CDH3-202ENST00000429102 TRABD2AQ86V40 505 aa13.15□□□□□ -0.3
CDH3-202ENST00000429102 ZNF75CPQ92670 426 aaPredicted RBP13.15□□□□□ -0.3
CDH3-202ENST00000429102 ATG4CQ96DT6 458 aa13.15□□□□□ -0.3
CDH3-202ENST00000429102 RAB3IPQ96QF0 476 aaPredicted RBP13.15□□□□□ -0.3
CDH3-202ENST00000429102 DLGAP2Q9P1A6 1054 aa13.15□□□□□ -0.3
CDH3-202ENST00000429102 USH1CQ9Y6N9 552 aa13.15□□□□□ -0.3
CDH3-202ENST00000429102 TTLL13PA6NNM8 815 aa13.15□□□□□ -0.3
CDH3-202ENST00000429102 UNGP13051 313 aaPredicted RBP13.15□□□□□ -0.3
CDH3-202ENST00000429102 SERPINB3P29508 390 aa13.15□□□□□ -0.3
CDH3-202ENST00000429102 CDH8P55286 799 aa13.15□□□□□ -0.3
CDH3-202ENST00000429102 KHDC1Q4VXA5 237 aaKnown RBP13.15□□□□□ -0.3
CDH3-202ENST00000429102 FYB2Q5VWT5 728 aa13.15□□□□□ -0.3
CDH3-202ENST00000429102 C1orf228Q6PIY5 440 aa13.15□□□□□ -0.3
CDH3-202ENST00000429102 USP37Q86T82 979 aa13.15□□□□□ -0.3
CDH3-202ENST00000429102 RFX6Q8HWS3 928 aa13.15□□□□□ -0.3
CDH3-202ENST00000429102 NLGN1Q8N2Q7 840 aa13.15□□□□□ -0.3
CDH3-202ENST00000429102 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.15□□□□□ -0.3
CDH3-202ENST00000429102 FBXO36Q8NEA4 188 aa13.15□□□□□ -0.3
CDH3-202ENST00000429102 ACTL9Q8TC94 416 aa13.15□□□□□ -0.3
CDH3-202ENST00000429102 EBF2Q9HAK2 575 aa13.15□□□□□ -0.3
CDH3-202ENST00000429102 GYG2O15488 501 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 KRT36O76013 467 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 BGNP21810 368 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 MMP14P50281 582 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 TUBP50607 506 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 HIF1AQ16665 826 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 GALNTL6Q49A17 601 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 PLEKHG4Q58EX7 1191 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 SLC27A3Q5K4L6 730 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 FNBP1LQ5T0N5 605 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 NPNTQ6UXI9 565 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 PTPRN2Q92932 1015 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 AKT1S1Q96B36 256 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 TTC1Q99614 292 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 IMPG2Q9BZV3 1241 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 IQCGQ9H095 443 aaKnown RBP13.14□□□□□ -0.31
CDH3-202ENST00000429102 RANBP17Q9H2T7 1088 aaKnown RBP13.14□□□□□ -0.31
CDH3-202ENST00000429102 HEY1Q9Y5J3 304 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 NUMBLQ9Y6R0 609 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 DNAH12Q6ZR08 3092 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 SPDYE5A6NIY4 337 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 PSMA2P25787 234 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 OTUD4Q01804 1114 aaKnown RBP13.14□□□□□ -0.31
CDH3-202ENST00000429102 BMPR2Q13873 1038 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 RCN1Q15293 331 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 CCNG2Q16589 344 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 GPAT2Q6NUI2 795 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 CENPUQ71F23 418 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 CCDC60Q8IWA6 550 aaPredicted RBP13.14□□□□□ -0.31
CDH3-202ENST00000429102 EFCAB3Q8N7B9 438 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 PPM1NQ8N819 430 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 PDCD7Q8N8D1 485 aaKnown RBP13.14□□□□□ -0.31
CDH3-202ENST00000429102 FEZF2Q8TBJ5 459 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 UCMAQ8WVF2 138 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 ZNF606Q8WXB4 792 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 CLPTM1LQ96KA5 538 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 MTMR12Q9C0I1 747 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 NR2E3Q9Y5X4 410 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 ZCCHC18P0CG32 403 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 PTDSS1P48651 473 aaKnown RBP13.14□□□□□ -0.31
CDH3-202ENST00000429102 GPC3P51654 580 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 PRKCEQ02156 737 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 OGDHQ02218 1023 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 KPNB1Q14974 876 aaKnown RBP13.14□□□□□ -0.31
CDH3-202ENST00000429102 PGM5Q15124 567 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 TMEM154Q6P9G4 183 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 SPDYE1Q8NFV5 336 aaPredicted RBP13.14□□□□□ -0.31
CDH3-202ENST00000429102 RILPQ96NA2 401 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 IWS1Q96ST2 819 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 SLC5A4Q9NY91 659 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 PCDHA10Q9Y5I2 948 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 ZNF541Q9H0D2 1346 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 LAMB2P55268 1798 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 ADAMTSL1Q8N6G6 1762 aa13.14□□□□□ -0.31
CDH3-202ENST00000429102 DPPA5A6NC42 116 aa13.13□□□□□ -0.31
CDH3-202ENST00000429102 ASMTLO95671 621 aa13.13□□□□□ -0.31
CDH3-202ENST00000429102 MT-ND3P03897 115 aa13.13□□□□□ -0.31
CDH3-202ENST00000429102 ENO1P06733 434 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms