RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 POMGNT1Q8WZA1 660 aa16.79■□□□□ 0.28
SEC13-210ENST00000428626 SAAL1Q96ER3 474 aa16.79■□□□□ 0.28
SEC13-210ENST00000428626 LPIN3Q9BQK8 851 aa16.79■□□□□ 0.28
SEC13-210ENST00000428626 PYM1Q9BRP8 204 aaKnown RBP16.79■□□□□ 0.28
SEC13-210ENST00000428626 ZCWPW1Q9H0M4 648 aa16.79■□□□□ 0.28
SEC13-210ENST00000428626 FBXO4Q9UKT5 387 aa16.79■□□□□ 0.28
SEC13-210ENST00000428626 NDRG2Q9UN36 371 aaKnown RBP16.79■□□□□ 0.28
SEC13-210ENST00000428626 RPS9P46781 194 aaKnown RBP16.78■□□□□ 0.28
SEC13-210ENST00000428626 ALDH1A3P47895 512 aa16.78■□□□□ 0.28
SEC13-210ENST00000428626 MTAPQ13126 283 aa16.78■□□□□ 0.28
SEC13-210ENST00000428626 ZNF528Q3MIS6 628 aa16.78■□□□□ 0.28
SEC13-210ENST00000428626 L1TD1Q5T7N2 865 aaKnown RBP16.78■□□□□ 0.28
SEC13-210ENST00000428626 SV2BQ7L1I2 683 aa16.78■□□□□ 0.28
SEC13-210ENST00000428626 CXorf38Q8TB03 319 aa16.78■□□□□ 0.28
SEC13-210ENST00000428626 DEPDC1BQ8WUY9 529 aa16.78■□□□□ 0.28
SEC13-210ENST00000428626 NELL1Q92832 810 aa16.78■□□□□ 0.28
SEC13-210ENST00000428626 IRF7Q92985 503 aa16.78■□□□□ 0.28
SEC13-210ENST00000428626 PSMG2Q969U7 264 aa16.78■□□□□ 0.28
SEC13-210ENST00000428626 HVCN1Q96D96 273 aa16.78■□□□□ 0.28
SEC13-210ENST00000428626 NELL2Q99435 816 aa16.78■□□□□ 0.28
SEC13-210ENST00000428626 SLITRK6Q9H5Y7 841 aa16.78■□□□□ 0.28
SEC13-210ENST00000428626 MRPL44Q9H9J2 332 aaKnown RBP16.78■□□□□ 0.28
SEC13-210ENST00000428626 IL21Q9HBE4 155 aa16.78■□□□□ 0.28
SEC13-210ENST00000428626 TRPV5Q9NQA5 729 aa16.78■□□□□ 0.28
SEC13-210ENST00000428626 CCDC39Q9UFE4 941 aa16.78■□□□□ 0.28
SEC13-210ENST00000428626 PIAS3Q9Y6X2 628 aa16.78■□□□□ 0.28
SEC13-210ENST00000428626 FRMD3A2A2Y4 597 aa16.77■□□□□ 0.28
SEC13-210ENST00000428626 ABCD1P33897 745 aa16.77■□□□□ 0.28
SEC13-210ENST00000428626 TAF6P49848 677 aa16.77■□□□□ 0.28
SEC13-210ENST00000428626 PLD1Q13393 1074 aa16.77■□□□□ 0.28
SEC13-210ENST00000428626 SLC39A14Q15043 492 aa16.77■□□□□ 0.28
SEC13-210ENST00000428626 ARMCX5Q6P1M9 558 aa16.77■□□□□ 0.28
SEC13-210ENST00000428626 ZC3H14Q6PJT7 736 aaKnown RBP16.77■□□□□ 0.28
SEC13-210ENST00000428626 ARID3BQ8IVW6 561 aaPredicted RBP16.77■□□□□ 0.28
SEC13-210ENST00000428626 GLIS3Q8NEA6 775 aa16.77■□□□□ 0.28
SEC13-210ENST00000428626 CBWD1Q9BRT8 395 aa16.77■□□□□ 0.28
SEC13-210ENST00000428626 FAM213AQ9BRX8 229 aa16.77■□□□□ 0.28
SEC13-210ENST00000428626 PRMT8Q9NR22 394 aaPredicted RBP16.77■□□□□ 0.28
SEC13-210ENST00000428626 TMLHEQ9NVH6 421 aa16.77■□□□□ 0.28
SEC13-210ENST00000428626 SEL1LQ9UBV2 794 aa16.77■□□□□ 0.28
SEC13-210ENST00000428626 MORC2Q9Y6X9 1032 aaPredicted RBP16.77■□□□□ 0.28
SEC13-210ENST00000428626 NUP210Q8TEM1 1887 aaPredicted RBP16.77■□□□□ 0.27
SEC13-210ENST00000428626 GOLGA8IPA6NC78 632 aa16.76■□□□□ 0.27
SEC13-210ENST00000428626 GOLGA8JA6NMD2 632 aa16.76■□□□□ 0.27
SEC13-210ENST00000428626 ZNF263O14978 683 aa16.76■□□□□ 0.27
SEC13-210ENST00000428626 GCNT3O95395 438 aa16.76■□□□□ 0.27
SEC13-210ENST00000428626 PRAMEF12O95522 483 aa16.76■□□□□ 0.27
SEC13-210ENST00000428626 TDGF1P13385 188 aa16.76■□□□□ 0.27
SEC13-210ENST00000428626 GAP43P17677 238 aa16.76■□□□□ 0.27
SEC13-210ENST00000428626 PAX3P23760 479 aa16.76■□□□□ 0.27
SEC13-210ENST00000428626 GABRR2P28476 465 aa16.76■□□□□ 0.27
SEC13-210ENST00000428626 MAGEA9P43362 315 aa16.76■□□□□ 0.27
SEC13-210ENST00000428626 SOX9P48436 509 aa16.76■□□□□ 0.27
SEC13-210ENST00000428626 CYP4F8P98187 520 aa16.76■□□□□ 0.27
SEC13-210ENST00000428626 POU5F1Q01860 360 aaKnown RBP16.76■□□□□ 0.27
SEC13-210ENST00000428626 FCHO2Q0JRZ9 810 aa16.76■□□□□ 0.27
SEC13-210ENST00000428626 GAS6Q14393 721 aa16.76■□□□□ 0.27
SEC13-210ENST00000428626 BRSK2Q8IWQ3 736 aa16.76■□□□□ 0.27
SEC13-210ENST00000428626 KIAA2013Q8IYS2 634 aa16.76■□□□□ 0.27
SEC13-210ENST00000428626 C1orf127Q8N9H9 656 aa16.76■□□□□ 0.27
SEC13-210ENST00000428626 ZBTB44Q8NCP5 570 aa16.76■□□□□ 0.27
SEC13-210ENST00000428626 STKLD1Q8NE28 680 aa16.76■□□□□ 0.27
SEC13-210ENST00000428626 FAM3CQ92520 227 aa16.76■□□□□ 0.27
SEC13-210ENST00000428626 INTS4Q96HW7 963 aaKnown RBP16.76■□□□□ 0.27
SEC13-210ENST00000428626 ZFYVE19Q96K21 471 aa16.76■□□□□ 0.27
SEC13-210ENST00000428626 ACCSQ96QU6 501 aa16.76■□□□□ 0.27
SEC13-210ENST00000428626 SEPT5Q99719 369 aaPredicted RBP16.76■□□□□ 0.27
SEC13-210ENST00000428626 GPR88Q9GZN0 384 aa16.76■□□□□ 0.27
SEC13-210ENST00000428626 CHRDQ9H2X0 955 aa16.76■□□□□ 0.27
SEC13-210ENST00000428626 ATXN3LQ9H3M9 355 aa16.76■□□□□ 0.27
SEC13-210ENST00000428626 OLFML3Q9NRN5 406 aa16.76■□□□□ 0.27
SEC13-210ENST00000428626 HSFX1Q9UBD0 423 aa16.76■□□□□ 0.27
SEC13-210ENST00000428626 MRPS17Q9Y2R5 130 aaKnown RBP16.76■□□□□ 0.27
SEC13-210ENST00000428626 ASB3Q9Y575 518 aa16.76■□□□□ 0.27
SEC13-210ENST00000428626 DENND4CQ5VZ89 1909 aa16.76■□□□□ 0.27
SEC13-210ENST00000428626 KPNA7A9QM74 516 aa16.75■□□□□ 0.27
SEC13-210ENST00000428626 LILRB5O75023 590 aa16.75■□□□□ 0.27
SEC13-210ENST00000428626 PRPF6O94906 941 aaKnown RBP16.75■□□□□ 0.27
SEC13-210ENST00000428626 IDEP14735 1019 aa16.75■□□□□ 0.27
SEC13-210ENST00000428626 CCNE1P24864 410 aa16.75■□□□□ 0.27
SEC13-210ENST00000428626 POLR2BP30876 1174 aaKnown RBP16.75■□□□□ 0.27
SEC13-210ENST00000428626 GPR15P49685 360 aa16.75■□□□□ 0.27
SEC13-210ENST00000428626 POSTNQ15063 836 aa16.75■□□□□ 0.27
SEC13-210ENST00000428626 CCDC142Q17RM4 750 aa16.75■□□□□ 0.27
SEC13-210ENST00000428626 MGAT5BQ3V5L5 792 aa16.75■□□□□ 0.27
SEC13-210ENST00000428626 GPR158Q5T848 1215 aa16.75■□□□□ 0.27
SEC13-210ENST00000428626 TXNDC11Q6PKC3 985 aa16.75■□□□□ 0.27
SEC13-210ENST00000428626 TMEM150AQ86TG1 271 aa16.75■□□□□ 0.27
SEC13-210ENST00000428626 PDILTQ8N807 584 aa16.75■□□□□ 0.27
SEC13-210ENST00000428626 GIPC2Q8TF65 315 aa16.75■□□□□ 0.27
SEC13-210ENST00000428626 HPS3Q969F9 1004 aa16.75■□□□□ 0.27
SEC13-210ENST00000428626 BACH2Q9BYV9 841 aa16.75■□□□□ 0.27
SEC13-210ENST00000428626 SMG9Q9H0W8 520 aaKnown RBP16.75■□□□□ 0.27
SEC13-210ENST00000428626 PCIF1Q9H4Z3 704 aa16.75■□□□□ 0.27
SEC13-210ENST00000428626 LMAN1LQ9HAT1 526 aa16.75■□□□□ 0.27
SEC13-210ENST00000428626 DSEQ9UL01 958 aa16.75■□□□□ 0.27
SEC13-210ENST00000428626 KIF26AQ9ULI4 1882 aaPredicted RBP16.74■□□□□ 0.27
SEC13-210ENST00000428626 SLC38A8A6NNN8 435 aa16.74■□□□□ 0.27
SEC13-210ENST00000428626 MAN2B1O00754 1011 aa16.74■□□□□ 0.27
SEC13-210ENST00000428626 CHADO15335 359 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms