RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 SMIM35A0A1B0GVV1 85 aa11.04□□□□□ -0.64
HDAC9-210ENST00000428307 MBLAC1A4D2B0 266 aaPredicted RBP11.04□□□□□ -0.64
HDAC9-210ENST00000428307 GOLGA8SH3BPF8 625 aa11.04□□□□□ -0.64
HDAC9-210ENST00000428307 HSF2BPO75031 334 aa11.04□□□□□ -0.64
HDAC9-210ENST00000428307 LSM8O95777 96 aaKnown RBP11.04□□□□□ -0.64
HDAC9-210ENST00000428307 DARSP14868 501 aaKnown RBP11.04□□□□□ -0.64
HDAC9-210ENST00000428307 TCF4P15884 667 aa11.04□□□□□ -0.64
HDAC9-210ENST00000428307 EIF4BP23588 611 aaKnown RBP11.04□□□□□ -0.64
HDAC9-210ENST00000428307 AKAP5P24588 427 aa11.04□□□□□ -0.64
HDAC9-210ENST00000428307 CTGFP29279 349 aa11.04□□□□□ -0.64
HDAC9-210ENST00000428307 CHRNA3P32297 505 aa11.04□□□□□ -0.64
HDAC9-210ENST00000428307 GRM5P41594 1212 aa11.04□□□□□ -0.64
HDAC9-210ENST00000428307 CPT1AP50416 773 aa11.04□□□□□ -0.64
HDAC9-210ENST00000428307 RBP5P82980 135 aa11.04□□□□□ -0.64
HDAC9-210ENST00000428307 PPP2R5EQ16537 467 aa11.04□□□□□ -0.64
HDAC9-210ENST00000428307 KYAT1Q16773 422 aa11.04□□□□□ -0.64
HDAC9-210ENST00000428307 ZFYVE27Q5T4F4 411 aa11.04□□□□□ -0.64
HDAC9-210ENST00000428307 DNAJC24Q6P3W2 148 aa11.04□□□□□ -0.64
HDAC9-210ENST00000428307 SLC27A1Q6PCB7 646 aa11.04□□□□□ -0.64
HDAC9-210ENST00000428307 SLC4A11Q8NBS3 891 aa11.04□□□□□ -0.64
HDAC9-210ENST00000428307 DDX27Q96GQ7 796 aaKnown RBP11.04□□□□□ -0.64
HDAC9-210ENST00000428307 HEXIM2Q96MH2 286 aaKnown RBP11.04□□□□□ -0.64
HDAC9-210ENST00000428307 ZIM3Q96PE6 472 aa11.04□□□□□ -0.64
HDAC9-210ENST00000428307 HERPUD2Q9BSE4 406 aa11.04□□□□□ -0.64
HDAC9-210ENST00000428307 PLVAPQ9BX97 442 aa11.04□□□□□ -0.64
HDAC9-210ENST00000428307 TRIM6Q9C030 488 aaPredicted RBP11.04□□□□□ -0.64
HDAC9-210ENST00000428307 ELOVL4Q9GZR5 314 aa11.04□□□□□ -0.64
HDAC9-210ENST00000428307 CYTH4Q9UIA0 394 aa11.04□□□□□ -0.64
HDAC9-210ENST00000428307 SNX24Q9Y343 169 aa11.04□□□□□ -0.64
HDAC9-210ENST00000428307 C2CD2Q9Y426 696 aa11.04□□□□□ -0.64
HDAC9-210ENST00000428307 TMEM191CA6NGB0 347 aa11.03□□□□□ -0.64
HDAC9-210ENST00000428307 F8VP50 259 aa11.03□□□□□ -0.64
HDAC9-210ENST00000428307 CILPO75339 1184 aa11.03□□□□□ -0.64
HDAC9-210ENST00000428307 KRT14P02533 472 aa11.03□□□□□ -0.64
HDAC9-210ENST00000428307 CALB1P05937 261 aa11.03□□□□□ -0.64
HDAC9-210ENST00000428307 HSPA6P17066 643 aa11.03□□□□□ -0.64
HDAC9-210ENST00000428307 ATICP31939 592 aa11.03□□□□□ -0.64
HDAC9-210ENST00000428307 PTPN11Q06124 597 aaPredicted RBP11.03□□□□□ -0.64
HDAC9-210ENST00000428307 NNTQ13423 1086 aa11.03□□□□□ -0.64
HDAC9-210ENST00000428307 SNX1Q13596 522 aa11.03□□□□□ -0.64
HDAC9-210ENST00000428307 SIX1Q15475 284 aaPredicted RBP11.03□□□□□ -0.64
HDAC9-210ENST00000428307 PTPN20Q4JDL3 420 aa11.03□□□□□ -0.64
HDAC9-210ENST00000428307 CFAP58Q5T655 872 aa11.03□□□□□ -0.64
HDAC9-210ENST00000428307 ZNF771Q7L3S4 317 aaPredicted RBP11.03□□□□□ -0.64
HDAC9-210ENST00000428307 GOLGA6L1Q8N7Z2 621 aa11.03□□□□□ -0.64
HDAC9-210ENST00000428307 ATG4AQ8WYN0 398 aa11.03□□□□□ -0.64
HDAC9-210ENST00000428307 TMEM176AQ96HP8 235 aa11.03□□□□□ -0.64
HDAC9-210ENST00000428307 RUFY1Q96T51 708 aa11.03□□□□□ -0.64
HDAC9-210ENST00000428307 ZNF518BQ9C0D4 1074 aa11.03□□□□□ -0.64
HDAC9-210ENST00000428307 RAB17Q9H0T7 212 aa11.03□□□□□ -0.64
HDAC9-210ENST00000428307 NXF3Q9H4D5 531 aaKnown RBP11.03□□□□□ -0.64
HDAC9-210ENST00000428307 FAM204AQ9H8W3 233 aa11.03□□□□□ -0.64
HDAC9-210ENST00000428307 KLHL11Q9NVR0 708 aa11.03□□□□□ -0.64
HDAC9-210ENST00000428307 PCDHGC3Q9UN70 934 aa11.03□□□□□ -0.64
HDAC9-210ENST00000428307 PIN4Q9Y237 131 aaKnown RBP11.03□□□□□ -0.64
HDAC9-210ENST00000428307 BHMG1C9JSJ3 638 aaPredicted RBP11.03□□□□□ -0.64
HDAC9-210ENST00000428307 PPEF2O14830 753 aa11.03□□□□□ -0.64
HDAC9-210ENST00000428307 C6orf222P0C671 652 aaPredicted RBP11.03□□□□□ -0.64
HDAC9-210ENST00000428307 P4HA1P13674 534 aa11.03□□□□□ -0.64
HDAC9-210ENST00000428307 INHBEP58166 350 aa11.03□□□□□ -0.64
HDAC9-210ENST00000428307 DHX34Q14147 1143 aaKnown RBP11.03□□□□□ -0.64
HDAC9-210ENST00000428307 FSCN1Q16658 493 aaKnown RBP11.03□□□□□ -0.64
HDAC9-210ENST00000428307 SGO2Q562F6 1265 aa11.03□□□□□ -0.64
HDAC9-210ENST00000428307 ALS2CLQ60I27 953 aa11.03□□□□□ -0.64
HDAC9-210ENST00000428307 PPP1R2P3Q6NXS1 205 aa11.03□□□□□ -0.64
HDAC9-210ENST00000428307 NOTUMQ6P988 496 aa11.03□□□□□ -0.64
HDAC9-210ENST00000428307 RHOT1Q8IXI2 618 aa11.03□□□□□ -0.64
HDAC9-210ENST00000428307 IQCKQ8N0W5 287 aa11.03□□□□□ -0.64
HDAC9-210ENST00000428307 C7orf31Q8N865 590 aa11.03□□□□□ -0.64
HDAC9-210ENST00000428307 UBE2Q2Q8WVN8 375 aa11.03□□□□□ -0.64
HDAC9-210ENST00000428307 SEC14L1Q92503 715 aa11.03□□□□□ -0.64
HDAC9-210ENST00000428307 C18orf25Q96B23 403 aaPredicted RBP11.03□□□□□ -0.64
HDAC9-210ENST00000428307 RNF25Q96BH1 459 aaPredicted RBP11.03□□□□□ -0.64
HDAC9-210ENST00000428307 APBA2Q99767 749 aa11.03□□□□□ -0.64
HDAC9-210ENST00000428307 FAM118BQ9BPY3 351 aa11.03□□□□□ -0.64
HDAC9-210ENST00000428307 ARHGAP39Q9C0H5 1083 aa11.03□□□□□ -0.64
HDAC9-210ENST00000428307 SYNCQ9H7C4 482 aa11.03□□□□□ -0.64
HDAC9-210ENST00000428307 KLK14Q9P0G3 267 aa11.03□□□□□ -0.64
HDAC9-210ENST00000428307 ITGA11Q9UKX5 1188 aa11.03□□□□□ -0.64
HDAC9-210ENST00000428307 ABT1Q9ULW3 272 aaKnown RBP11.03□□□□□ -0.64
HDAC9-210ENST00000428307 MYADML2A6NDP7 307 aa11.02□□□□□ -0.65
HDAC9-210ENST00000428307 PI4K2BG5E9Z4 385 aa11.02□□□□□ -0.65
HDAC9-210ENST00000428307 FSCN2O14926 492 aa11.02□□□□□ -0.65
HDAC9-210ENST00000428307 MED7O43513 233 aa11.02□□□□□ -0.65
HDAC9-210ENST00000428307 SLC10A3P09131 477 aa11.02□□□□□ -0.65
HDAC9-210ENST00000428307 RALAP11233 206 aa11.02□□□□□ -0.65
HDAC9-210ENST00000428307 COILP38432 576 aaPredicted RBP11.02□□□□□ -0.65
HDAC9-210ENST00000428307 PTGIRP43119 386 aa11.02□□□□□ -0.65
HDAC9-210ENST00000428307 NDST1P52848 882 aa11.02□□□□□ -0.65
HDAC9-210ENST00000428307 YARSP54577 528 aaKnown RBP11.02□□□□□ -0.65
HDAC9-210ENST00000428307 PLTPP55058 493 aa11.02□□□□□ -0.65
HDAC9-210ENST00000428307 ADAM17P78536 824 aa11.02□□□□□ -0.65
HDAC9-210ENST00000428307 CDC42EP1Q00587 391 aa11.02□□□□□ -0.65
HDAC9-210ENST00000428307 OGDHQ02218 1023 aa11.02□□□□□ -0.65
HDAC9-210ENST00000428307 ZNF252P-AS1Q0IIN9 211 aa11.02□□□□□ -0.65
HDAC9-210ENST00000428307 SNX17Q15036 470 aa11.02□□□□□ -0.65
HDAC9-210ENST00000428307 DCAF4L1Q3SXM0 396 aa11.02□□□□□ -0.65
HDAC9-210ENST00000428307 DUPD1Q68J44 220 aa11.02□□□□□ -0.65
HDAC9-210ENST00000428307 PAXIP1Q6ZW49 1069 aaPredicted RBP11.02□□□□□ -0.65
HDAC9-210ENST00000428307 C12orf29Q8N999 325 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms