RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 ACSS3Q9H6R3 686 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 FAM189A1O60320 539 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 PLA2G4BP0C869 781 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 TFAP4Q01664 338 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 APOFQ13790 326 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 RBM26Q5T8P6 1007 aaKnown RBP5.42□□□□□ -1.54
RIF1-203ENST00000428287 RWDD4Q6NW29 188 aaKnown RBP5.42□□□□□ -1.54
RIF1-203ENST00000428287 CCDC105Q8IYK2 499 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 SCYL3Q8IZE3 742 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 PROCA1Q8NCQ7 364 aaPredicted RBP5.42□□□□□ -1.54
RIF1-203ENST00000428287 SNF8Q96H20 258 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 BIRC8Q96P09 236 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 ZNF696Q9H7X3 374 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 C6orf50Q9HD87 102 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 ARHGEF4Q9NR80 690 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 TUBA8Q9NY65 449 aaPredicted RBP5.42□□□□□ -1.54
RIF1-203ENST00000428287 HEY2Q9UBP5 337 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 EXOC7Q9UPT5 735 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 FARP1Q9Y4F1 1045 aaPredicted RBP5.42□□□□□ -1.54
RIF1-203ENST00000428287 FADS3Q9Y5Q0 445 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 HEATR1Q9H583 2144 aaKnown RBP5.42□□□□□ -1.54
RIF1-203ENST00000428287 DENND3A2RUS2 1198 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 F5H6K3 240 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 MAP3K7O43318 606 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 NR3C1P04150 777 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 INHBBP09529 407 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 KLRC2P26717 231 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 PRDX6P30041 224 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 MTTPP55157 894 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 CYLC2Q14093 348 aaPredicted RBP5.42□□□□□ -1.54
RIF1-203ENST00000428287 MORF4L2Q15014 288 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 OASLQ15646 514 aaKnown RBP5.42□□□□□ -1.54
RIF1-203ENST00000428287 ULK2Q8IYT8 1036 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 RIN3Q8TB24 985 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 ZFRQ96KR1 1074 aaKnown RBP5.42□□□□□ -1.54
RIF1-203ENST00000428287 SLC4A9Q96Q91 983 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 NINJ2Q9NZG7 142 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 SPATA7Q9P0W8 599 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 ANGPTL2Q9UKU9 493 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 ATG2BQ96BY7 2078 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 IRS2Q9Y4H2 1338 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 TBX3O15119 743 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 SERPINB7O75635 380 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 ZC3H6P61129 1189 aaKnown RBP5.42□□□□□ -1.54
RIF1-203ENST00000428287 AP2B1P63010 937 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 DSG1Q02413 1049 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 PPARDQ03181 441 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 ADGRD1Q6QNK2 874 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 HS2ST1Q7LGA3 356 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 NLRX1Q86UT6 975 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 DNAAF5Q86Y56 855 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.42□□□□□ -1.54
RIF1-203ENST00000428287 PANX3Q96QZ0 392 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 SOX13Q9UN79 622 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 SDK1Q7Z5N4 2213 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 MYO3BQ8WXR4 1341 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 SPATA31C1P0DKV0 1188 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 ANPEPP15144 967 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 HALP42357 657 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 ZNF211Q13398 564 aaPredicted RBP5.42□□□□□ -1.54
RIF1-203ENST00000428287 PPP1R18Q6NYC8 613 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 DYMQ7RTS9 669 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 PHLDB2Q86SQ0 1253 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 FAM84BQ96KN1 310 aaPredicted RBP5.42□□□□□ -1.54
RIF1-203ENST00000428287 HSD17B14Q9BPX1 270 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 SLC2A11Q9BYW1 496 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 ETNK2Q9NVF9 386 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 KCNK4Q9NYG8 393 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 BTBD7Q9P203 1132 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 ABCF2Q9UG63 623 aa5.42□□□□□ -1.54
RIF1-203ENST00000428287 CLUHO75153 1309 aa5.41□□□□□ -1.54
RIF1-203ENST00000428287 ZSWIM8A7E2V4 1837 aa5.41□□□□□ -1.54
RIF1-203ENST00000428287 POLD1P28340 1107 aa5.41□□□□□ -1.54
RIF1-203ENST00000428287 COPB2P35606 906 aa5.41□□□□□ -1.54
RIF1-203ENST00000428287 ALDH3B2P48448 385 aa5.41□□□□□ -1.54
RIF1-203ENST00000428287 NOP14P78316 857 aaKnown RBP5.41□□□□□ -1.54
RIF1-203ENST00000428287 ENPEPQ07075 957 aa5.41□□□□□ -1.54
RIF1-203ENST00000428287 LRRC41Q15345 812 aa5.41□□□□□ -1.54
RIF1-203ENST00000428287 CCDC80Q76M96 950 aa5.41□□□□□ -1.54
RIF1-203ENST00000428287 SYCP3Q8IZU3 236 aa5.41□□□□□ -1.54
RIF1-203ENST00000428287 ARHGEF1Q92888 912 aaKnown RBP5.41□□□□□ -1.54
RIF1-203ENST00000428287 VCPIP1Q96JH7 1222 aa5.41□□□□□ -1.54
RIF1-203ENST00000428287 SNX27Q96L92 541 aa5.41□□□□□ -1.54
RIF1-203ENST00000428287 TRABDQ9H4I3 376 aa5.41□□□□□ -1.54
RIF1-203ENST00000428287 TMEM98Q9Y2Y6 226 aa5.41□□□□□ -1.54
RIF1-203ENST00000428287 TMED5Q9Y3A6 229 aa5.41□□□□□ -1.54
RIF1-203ENST00000428287 UBE4BO95155 1302 aa5.41□□□□□ -1.54
RIF1-203ENST00000428287 KRT4P19013 534 aa5.41□□□□□ -1.54
RIF1-203ENST00000428287 TBL3Q12788 808 aaKnown RBP5.41□□□□□ -1.54
RIF1-203ENST00000428287 PDCD4Q53EL6 469 aaKnown RBP5.41□□□□□ -1.54
RIF1-203ENST00000428287 HSP90AA5PQ58FG0 334 aa5.41□□□□□ -1.54
RIF1-203ENST00000428287 SYDE2Q5VT97 1194 aa5.41□□□□□ -1.54
RIF1-203ENST00000428287 ZNF410Q86VK4 478 aa5.41□□□□□ -1.54
RIF1-203ENST00000428287 ERI1Q8IV48 349 aaKnown RBP5.41□□□□□ -1.54
RIF1-203ENST00000428287 VPS52Q8N1B4 723 aa5.41□□□□□ -1.54
RIF1-203ENST00000428287 BANPQ8N9N5 519 aa5.41□□□□□ -1.54
RIF1-203ENST00000428287 TTC13Q8NBP0 860 aa5.41□□□□□ -1.54
RIF1-203ENST00000428287 ZCRB1Q8TBF4 217 aaKnown RBP5.41□□□□□ -1.54
RIF1-203ENST00000428287 STON2Q8WXE9 905 aa5.41□□□□□ -1.54
RIF1-203ENST00000428287 JADE3Q92613 823 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms